RNA–Protein interactions for RNA: ENST00000455727.6

LDLR-202, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-202ENST00000455727 MSX1P28360 303 aa13.54□□□□□ -0.24
LDLR-202ENST00000455727 PTGS2P35354 604 aa13.54□□□□□ -0.24
LDLR-202ENST00000455727 DAP3P51398 398 aaKnown RBP13.54□□□□□ -0.24
LDLR-202ENST00000455727 ETFDHQ16134 617 aa13.54□□□□□ -0.24
LDLR-202ENST00000455727 ELFN2Q5R3F8 820 aa13.54□□□□□ -0.24
LDLR-202ENST00000455727 C6orf183Q5T699 404 aa13.54□□□□□ -0.24
LDLR-202ENST00000455727 FAM205BPQ63HN1 556 aa13.54□□□□□ -0.24
LDLR-202ENST00000455727 OR5M10Q6IEU7 315 aa13.54□□□□□ -0.24
LDLR-202ENST00000455727 DNM1P34Q6PK57 102 aa13.54□□□□□ -0.24
LDLR-202ENST00000455727 SLC35D2Q76EJ3 337 aa13.54□□□□□ -0.24
LDLR-202ENST00000455727 KRT77Q7Z794 578 aa13.54□□□□□ -0.24
LDLR-202ENST00000455727 LILRB4Q8NHJ6 448 aa13.54□□□□□ -0.24
LDLR-202ENST00000455727 ASB10Q8WXI3 467 aa13.54□□□□□ -0.24
LDLR-202ENST00000455727 ABHD6Q9BV23 337 aa13.54□□□□□ -0.24
LDLR-202ENST00000455727 POTEKPQ9BYX7 375 aa13.54□□□□□ -0.24
LDLR-202ENST00000455727 FANCFQ9NPI8 374 aa13.54□□□□□ -0.24
LDLR-202ENST00000455727 TRBV11-1A0A0K0K1C0 115 aa13.53□□□□□ -0.24
LDLR-202ENST00000455727 ANKRD20A5PA0PJZ0 165 aa13.53□□□□□ -0.24
LDLR-202ENST00000455727 MAS1P04201 325 aa13.53□□□□□ -0.24
LDLR-202ENST00000455727 CYC1P08574 325 aa13.53□□□□□ -0.24
LDLR-202ENST00000455727 DHPSP49366 369 aaPredicted RBP13.53□□□□□ -0.24
LDLR-202ENST00000455727 RIDAP52758 137 aaKnown RBP13.53□□□□□ -0.24
LDLR-202ENST00000455727 SLC25A53Q5H9E4 307 aa13.53□□□□□ -0.24
LDLR-202ENST00000455727 MTFR2Q6P444 385 aa13.53□□□□□ -0.24
LDLR-202ENST00000455727 CPEB2Q7Z5Q1 589 aaKnown RBP13.53□□□□□ -0.24
LDLR-202ENST00000455727 DNAAF1Q8NEP3 725 aa13.53□□□□□ -0.24
LDLR-202ENST00000455727 DEDD2Q8WXF8 326 aa13.53□□□□□ -0.24
LDLR-202ENST00000455727 ATOH1Q92858 354 aaPredicted RBP13.53□□□□□ -0.24
LDLR-202ENST00000455727 DDIT4LQ96D03 193 aa13.53□□□□□ -0.24
LDLR-202ENST00000455727 MESP1Q9BRJ9 268 aa13.53□□□□□ -0.24
LDLR-202ENST00000455727 ULBP3Q9BZM4 244 aa13.53□□□□□ -0.24
LDLR-202ENST00000455727 SLC26A1Q9H2B4 701 aa13.53□□□□□ -0.24
LDLR-202ENST00000455727 RCE1Q9Y256 329 aa13.53□□□□□ -0.24
LDLR-202ENST00000455727 IGLV3-32A0A0A0MS00 114 aa13.53□□□□□ -0.24
LDLR-202ENST00000455727 SIGLEC6O43699 453 aa13.53□□□□□ -0.24
LDLR-202ENST00000455727 PNPP00491 289 aa13.53□□□□□ -0.24
LDLR-202ENST00000455727 HLA-DOBP13765 273 aa13.53□□□□□ -0.24
LDLR-202ENST00000455727 TAS2R20P59543 309 aa13.53□□□□□ -0.24
LDLR-202ENST00000455727 EIF2B1Q14232 305 aaKnown RBP13.53□□□□□ -0.24
LDLR-202ENST00000455727 MELKQ14680 651 aa13.53□□□□□ -0.24
LDLR-202ENST00000455727 PCK2Q16822 640 aa13.53□□□□□ -0.24
LDLR-202ENST00000455727 OLFML2AQ68BL7 652 aa13.53□□□□□ -0.24
LDLR-202ENST00000455727 TMEM205Q6UW68 189 aa13.53□□□□□ -0.24
LDLR-202ENST00000455727 FGD2Q7Z6J4 655 aa13.53□□□□□ -0.24
LDLR-202ENST00000455727 CATSPERDQ86XM0 798 aa13.53□□□□□ -0.24
LDLR-202ENST00000455727 OR11H7Q8NGC8 314 aa13.53□□□□□ -0.24
LDLR-202ENST00000455727 OR52N5Q8NH56 324 aa13.53□□□□□ -0.24
LDLR-202ENST00000455727 THAP3Q8WTV1 239 aaPredicted RBP13.53□□□□□ -0.24
LDLR-202ENST00000455727 TSEN15Q8WW01 171 aaKnown RBP13.53□□□□□ -0.24
LDLR-202ENST00000455727 PTTG3PQ9NZH4 202 aa13.53□□□□□ -0.24
LDLR-202ENST00000455727 MED11Q9P086 117 aa13.53□□□□□ -0.24
LDLR-202ENST00000455727 ING4Q9UNL4 249 aa13.53□□□□□ -0.24
LDLR-202ENST00000455727 COA3Q9Y2R0 106 aaPredicted RBP13.53□□□□□ -0.24
LDLR-202ENST00000455727 XRCC3O43542 346 aa13.52□□□□□ -0.24
LDLR-202ENST00000455727 ZFAND5O76080 213 aa13.52□□□□□ -0.24
LDLR-202ENST00000455727 GLSO94925 669 aaPredicted RBP13.52□□□□□ -0.24
LDLR-202ENST00000455727 PSMB1P20618 241 aaKnown RBP13.52□□□□□ -0.24
LDLR-202ENST00000455727 IL11P20809 199 aa13.52□□□□□ -0.24
LDLR-202ENST00000455727 ANGPT1Q15389 498 aa13.52□□□□□ -0.24
LDLR-202ENST00000455727 UBALD2Q8IYN6 164 aa13.52□□□□□ -0.24
LDLR-202ENST00000455727 SLC26A10Q8NG04 563 aa13.52□□□□□ -0.24
LDLR-202ENST00000455727 ARL5BQ96KC2 179 aa13.52□□□□□ -0.24
LDLR-202ENST00000455727 FOXN4Q96NZ1 517 aa13.52□□□□□ -0.24
LDLR-202ENST00000455727 KCNK17Q96T54 332 aa13.52□□□□□ -0.24
LDLR-202ENST00000455727 SPSB2Q99619 263 aa13.52□□□□□ -0.24
LDLR-202ENST00000455727 NPAS1Q99742 590 aa13.52□□□□□ -0.24
LDLR-202ENST00000455727 C20orf85Q9H1P6 137 aa13.52□□□□□ -0.24
LDLR-202ENST00000455727 CHST11Q9NPF2 352 aa13.52□□□□□ -0.24
LDLR-202ENST00000455727 KLK11Q9UBX7 282 aa13.52□□□□□ -0.24
LDLR-202ENST00000455727 C2orf72A6NCS6 295 aa13.52□□□□□ -0.25
LDLR-202ENST00000455727 A6NL46 340 aa13.52□□□□□ -0.25
LDLR-202ENST00000455727 NPIPA5E9PKD4 350 aa13.52□□□□□ -0.25
LDLR-202ENST00000455727 PRAF2O60831 178 aa13.52□□□□□ -0.25
LDLR-202ENST00000455727 PEX14O75381 377 aa13.52□□□□□ -0.25
LDLR-202ENST00000455727 ANXA3P12429 323 aa13.52□□□□□ -0.25
LDLR-202ENST00000455727 FOSL2P15408 326 aa13.52□□□□□ -0.25
LDLR-202ENST00000455727 RPS15P62841 145 aaKnown RBP13.52□□□□□ -0.25
LDLR-202ENST00000455727 OR7A5Q15622 319 aa13.52□□□□□ -0.25
LDLR-202ENST00000455727 ODF4Q2M2E3 257 aa13.52□□□□□ -0.25
LDLR-202ENST00000455727 LAMTOR1Q6IAA8 161 aa13.52□□□□□ -0.25
LDLR-202ENST00000455727 ARSKQ6UWY0 536 aa13.52□□□□□ -0.25
LDLR-202ENST00000455727 GIMAP1Q8WWP7 306 aa13.52□□□□□ -0.25
LDLR-202ENST00000455727 NAT6Q93015 286 aa13.52□□□□□ -0.25
LDLR-202ENST00000455727 MRGPRX4Q96LA9 322 aa13.52□□□□□ -0.25
LDLR-202ENST00000455727 CCDC74BQ96LY2 380 aa13.52□□□□□ -0.25
LDLR-202ENST00000455727 RANBP3Q9H6Z4 567 aaPredicted RBP13.52□□□□□ -0.25
LDLR-202ENST00000455727 SLC17A5Q9NRA2 495 aa13.52□□□□□ -0.25
LDLR-202ENST00000455727 SDHAF3Q9NRP4 125 aa13.52□□□□□ -0.25
LDLR-202ENST00000455727 MYOTQ9UBF9 498 aa13.52□□□□□ -0.25
LDLR-202ENST00000455727 NPIPA1Q9UND3 350 aa13.52□□□□□ -0.25
LDLR-202ENST00000455727 B3GALT5Q9Y2C3 310 aa13.52□□□□□ -0.25
LDLR-202ENST00000455727 LRP12Q9Y561 859 aa13.52□□□□□ -0.25
LDLR-202ENST00000455727 RALGAPA1Q6GYQ0 2036 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 FABP7O15540 132 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 GMDSO60547 372 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 SRSF10O75494 262 aaKnown RBP13.51□□□□□ -0.25
LDLR-202ENST00000455727 KHDRBS3O75525 346 aaKnown RBP13.51□□□□□ -0.25
LDLR-202ENST00000455727 AQP8O94778 261 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 CD37P11049 281 aa13.51□□□□□ -0.25
LDLR-202ENST00000455727 IFNGR1P15260 489 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms