RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 UPK3AO75631 287 aa12.25□□□□□ -0.45
CLK3-203ENST00000454830 CCNKO75909 580 aa12.25□□□□□ -0.45
CLK3-203ENST00000454830 P04436 131 aa12.25□□□□□ -0.45
CLK3-203ENST00000454830 UCHL1P09936 223 aa12.25□□□□□ -0.45
CLK3-203ENST00000454830 PTGDSP41222 190 aa12.25□□□□□ -0.45
CLK3-203ENST00000454830 BLVRAP53004 296 aa12.25□□□□□ -0.45
CLK3-203ENST00000454830 TAF13Q15543 124 aa12.25□□□□□ -0.45
CLK3-203ENST00000454830 SETD6Q8TBK2 473 aa12.25□□□□□ -0.45
CLK3-203ENST00000454830 POC1BQ8TC44 478 aa12.25□□□□□ -0.45
CLK3-203ENST00000454830 GPR148Q8TDV2 347 aa12.25□□□□□ -0.45
CLK3-203ENST00000454830 KCTD12Q96CX2 325 aaKnown RBP12.25□□□□□ -0.45
CLK3-203ENST00000454830 ZNF700Q9H0M5 742 aa12.25□□□□□ -0.45
CLK3-203ENST00000454830 B3GALT5Q9Y2C3 310 aa12.25□□□□□ -0.45
CLK3-203ENST00000454830 CD3GP09693 182 aa12.24□□□□□ -0.45
CLK3-203ENST00000454830 MAPK3P27361 379 aaPredicted RBP12.24□□□□□ -0.45
CLK3-203ENST00000454830 ZNF468Q5VIY5 522 aaPredicted RBP12.24□□□□□ -0.45
CLK3-203ENST00000454830 LINGO2Q7L985 606 aa12.24□□□□□ -0.45
CLK3-203ENST00000454830 TIPARPQ7Z3E1 657 aaKnown RBP12.24□□□□□ -0.45
CLK3-203ENST00000454830 ASB10Q8WXI3 467 aa12.24□□□□□ -0.45
CLK3-203ENST00000454830 EMC9Q9Y3B6 208 aa12.24□□□□□ -0.45
CLK3-203ENST00000454830 PCDHGB2Q9Y5G2 931 aa12.24□□□□□ -0.45
CLK3-203ENST00000454830 V9GY05 133 aa12.24□□□□□ -0.45
CLK3-203ENST00000454830 ADAM10O14672 748 aa12.24□□□□□ -0.45
CLK3-203ENST00000454830 PIN1P1O15428 100 aa12.24□□□□□ -0.45
CLK3-203ENST00000454830 ZNF208O43345 1280 aa12.24□□□□□ -0.45
CLK3-203ENST00000454830 H2BFMP0C1H6 154 aa12.24□□□□□ -0.45
CLK3-203ENST00000454830 GUCA1AP43080 201 aaPredicted RBP12.24□□□□□ -0.45
CLK3-203ENST00000454830 SPEM2Q0P670 501 aa12.24□□□□□ -0.45
CLK3-203ENST00000454830 SLC17A1Q14916 467 aa12.24□□□□□ -0.45
CLK3-203ENST00000454830 WDR38Q5JTN6 314 aa12.24□□□□□ -0.45
CLK3-203ENST00000454830 FCRLAQ7L513 359 aa12.24□□□□□ -0.45
CLK3-203ENST00000454830 NAXDQ8IW45 347 aa12.24□□□□□ -0.45
CLK3-203ENST00000454830 SLC39A7Q92504 469 aa12.24□□□□□ -0.45
CLK3-203ENST00000454830 RFT1Q96AA3 541 aa12.24□□□□□ -0.45
CLK3-203ENST00000454830 SPTBN2O15020 2390 aa12.24□□□□□ -0.45
CLK3-203ENST00000454830 IGLV1-36A0A0B4J1U3 117 aa12.24□□□□□ -0.45
CLK3-203ENST00000454830 ANKRD33BA6NCL7 494 aa12.24□□□□□ -0.45
CLK3-203ENST00000454830 EGR3Q06889 387 aa12.24□□□□□ -0.45
CLK3-203ENST00000454830 YRDCQ86U90 279 aaKnown RBP12.24□□□□□ -0.45
CLK3-203ENST00000454830 ZNF679Q8IYX0 411 aa12.24□□□□□ -0.45
CLK3-203ENST00000454830 SCAIQ8N9R8 606 aa12.24□□□□□ -0.45
CLK3-203ENST00000454830 OR6N1Q8NGY5 312 aa12.24□□□□□ -0.45
CLK3-203ENST00000454830 RGP1Q92546 391 aaPredicted RBP12.24□□□□□ -0.45
CLK3-203ENST00000454830 OR8B4Q96RC9 309 aa12.24□□□□□ -0.45
CLK3-203ENST00000454830 THAP7Q9BT49 309 aaPredicted RBP12.24□□□□□ -0.45
CLK3-203ENST00000454830 LOC102723996A0A087X1L8 192 aa12.23□□□□□ -0.45
CLK3-203ENST00000454830 IGKV1D-43A0A0B4J1Z2 117 aa12.23□□□□□ -0.45
CLK3-203ENST00000454830 TRAV1-2A0A0B4J238 106 aa12.23□□□□□ -0.45
CLK3-203ENST00000454830 B4E171 279 aa12.23□□□□□ -0.45
CLK3-203ENST00000454830 LYRM1O43325 122 aa12.23□□□□□ -0.45
CLK3-203ENST00000454830 ONECUT2O95948 504 aa12.23□□□□□ -0.45
CLK3-203ENST00000454830 KLK2P20151 261 aa12.23□□□□□ -0.45
CLK3-203ENST00000454830 TSPAN7P41732 249 aa12.23□□□□□ -0.45
CLK3-203ENST00000454830 RFX2P48378 723 aa12.23□□□□□ -0.45
CLK3-203ENST00000454830 OR14L1PQ8NHC6 308 aa12.23□□□□□ -0.45
CLK3-203ENST00000454830 TAAR9Q96RI9 348 aa12.23□□□□□ -0.45
CLK3-203ENST00000454830 POTEKPQ9BYX7 375 aa12.23□□□□□ -0.45
CLK3-203ENST00000454830 PPP1R3EQ9H7J1 279 aa12.23□□□□□ -0.45
CLK3-203ENST00000454830 EMC7Q9NPA0 242 aa12.23□□□□□ -0.45
CLK3-203ENST00000454830 P4HTMQ9NXG6 502 aa12.23□□□□□ -0.45
CLK3-203ENST00000454830 CENPBD1B2RD01 187 aa12.23□□□□□ -0.45
CLK3-203ENST00000454830 SC5DO75845 299 aa12.23□□□□□ -0.45
CLK3-203ENST00000454830 EIF1P41567 113 aaKnown RBP12.23□□□□□ -0.45
CLK3-203ENST00000454830 RASGEF1BQ0VAM2 473 aa12.23□□□□□ -0.45
CLK3-203ENST00000454830 SELENBP1Q13228 472 aa12.23□□□□□ -0.45
CLK3-203ENST00000454830 GFOD2Q3B7J2 385 aa12.23□□□□□ -0.45
CLK3-203ENST00000454830 METAP1DQ6UB28 335 aaPredicted RBP12.23□□□□□ -0.45
CLK3-203ENST00000454830 PRSS45Q7RTY3 260 aa12.23□□□□□ -0.45
CLK3-203ENST00000454830 ASB17Q8WXJ9 295 aa12.23□□□□□ -0.45
CLK3-203ENST00000454830 KIAA1143Q96AT1 154 aaPredicted RBP12.23□□□□□ -0.45
CLK3-203ENST00000454830 DCBLD2Q96PD2 775 aa12.23□□□□□ -0.45
CLK3-203ENST00000454830 MNTQ99583 582 aa12.23□□□□□ -0.45
CLK3-203ENST00000454830 MRPL15Q9P015 296 aaKnown RBP12.23□□□□□ -0.45
CLK3-203ENST00000454830 FBXL3Q9UKT7 428 aa12.23□□□□□ -0.45
CLK3-203ENST00000454830 A0A0G2JK05 382 aa12.23□□□□□ -0.45
CLK3-203ENST00000454830 TMEM212A6NML5 194 aa12.23□□□□□ -0.45
CLK3-203ENST00000454830 RAMP1O60894 148 aa12.23□□□□□ -0.45
CLK3-203ENST00000454830 CDAP32320 146 aa12.23□□□□□ -0.45
CLK3-203ENST00000454830 PRKXP51817 358 aa12.23□□□□□ -0.45
CLK3-203ENST00000454830 NKX2-5P52952 324 aaPredicted RBP12.23□□□□□ -0.45
CLK3-203ENST00000454830 CLDN17P56750 224 aa12.23□□□□□ -0.45
CLK3-203ENST00000454830 M1APQ8TC57 530 aa12.23□□□□□ -0.45
CLK3-203ENST00000454830 ABCG5Q9H222 651 aa12.23□□□□□ -0.45
CLK3-203ENST00000454830 LIN7BQ9HAP6 207 aa12.23□□□□□ -0.45
CLK3-203ENST00000454830 CYSLTR2Q9NS75 346 aa12.23□□□□□ -0.45
CLK3-203ENST00000454830 VSX1Q9NZR4 365 aaPredicted RBP12.23□□□□□ -0.45
CLK3-203ENST00000454830 WNT11O96014 354 aa12.22□□□□□ -0.45
CLK3-203ENST00000454830 IGHG1P01857 330 aa12.22□□□□□ -0.45
CLK3-203ENST00000454830 FCER2P06734 321 aa12.22□□□□□ -0.45
CLK3-203ENST00000454830 NPR2P20594 1047 aa12.22□□□□□ -0.45
CLK3-203ENST00000454830 DLSTP36957 453 aa12.22□□□□□ -0.45
CLK3-203ENST00000454830 KLHL24Q6TFL4 600 aa12.22□□□□□ -0.45
CLK3-203ENST00000454830 STAC2Q6ZMT1 411 aa12.22□□□□□ -0.45
CLK3-203ENST00000454830 GCDHQ92947 438 aaPredicted RBP12.22□□□□□ -0.45
CLK3-203ENST00000454830 PHF21AQ96BD5 680 aa12.22□□□□□ -0.45
CLK3-203ENST00000454830 DHDHQ9UQ10 334 aa12.22□□□□□ -0.45
CLK3-203ENST00000454830 LRP12Q9Y561 859 aa12.22□□□□□ -0.45
CLK3-203ENST00000454830 TMEM269A0A1B0GVZ9 245 aa12.22□□□□□ -0.45
CLK3-203ENST00000454830 OR4C45A6NMZ5 311 aa12.22□□□□□ -0.45
CLK3-203ENST00000454830 THBS2P35442 1172 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms