RNA–Protein interactions for RNA: ENST00000454468.5

SMPD4-213, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 3,586 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-213ENST00000454468 FITM1A5D6W6 292 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 SHISA7A6NL88 538 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 ZNF726A6NNF4 738 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 PDGFBP01127 241 aaPredicted RBP10.81□□□□□ -0.68
SMPD4-213ENST00000454468 SLC2A5P22732 501 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 MST1P26927 711 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 ERP29P30040 261 aaKnown RBP10.81□□□□□ -0.68
SMPD4-213ENST00000454468 CDAP32320 146 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 POU3F4P49335 361 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 P2RX1P51575 399 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 RPL27P61353 136 aaKnown RBP10.81□□□□□ -0.68
SMPD4-213ENST00000454468 GPLD1P80108 840 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 CPEB4Q17RY0 729 aaKnown RBP eCLIP10.81□□□□□ -0.68
SMPD4-213ENST00000454468 CDONQ4KMG0 1287 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 WDR38Q5JTN6 314 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 GLYATL3Q5SZD4 288 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 SYS1Q8N2H4 156 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 LAT2Q9GZY6 243 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 FXYD6Q9H0Q3 95 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 EXO5Q9H790 373 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 NUDT21O43809 227 aaKnown RBP10.81□□□□□ -0.68
SMPD4-213ENST00000454468 GPRIN2O60269 458 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 KLK3P07288 261 aaPredicted RBP10.81□□□□□ -0.68
SMPD4-213ENST00000454468 NUDT1P36639 197 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 CLDN20P56880 219 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 AP3S2P59780 193 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 PUDPQ08623 228 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 FOXF1Q12946 379 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 OR10G3Q8NGC4 313 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 PMM1Q92871 262 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 DOCK7Q96N67 2140 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 WDR77Q9BQA1 342 aaPredicted RBP10.81□□□□□ -0.68
SMPD4-213ENST00000454468 NOX3Q9HBY0 568 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 AKAP7Q9P0M2 348 aaPredicted RBP10.81□□□□□ -0.68
SMPD4-213ENST00000454468 ICAM5Q9UMF0 924 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 HIF3AQ9Y2N7 669 aa10.81□□□□□ -0.68
SMPD4-213ENST00000454468 IGHV3-15A0A0B4J1V0 119 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 UBE2QL1A1L167 161 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 PRSS37A4D1T9 235 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 TRAPPC6AO75865 159 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 PSMA6P60900 246 aaKnown RBP10.8□□□□□ -0.68
SMPD4-213ENST00000454468 RPS15P62841 145 aaKnown RBP10.8□□□□□ -0.68
SMPD4-213ENST00000454468 DCDP81605 110 aaKnown RBP10.8□□□□□ -0.68
SMPD4-213ENST00000454468 PLA2G7Q13093 441 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 UBE2NLQ5JXB2 153 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 CD163Q86VB7 1156 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 FTMTQ8N4E7 242 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 SPEM1Q8N4L4 309 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 OR52B4Q8NGK2 314 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 OR5D18Q8NGL1 313 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 OR2AJ1Q8NGZ0 328 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 YIPF5Q969M3 257 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 PLEKHA1Q9HB21 404 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 TAS2R4Q9NYW5 299 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 VSX1Q9NZR4 365 aaPredicted RBP10.8□□□□□ -0.68
SMPD4-213ENST00000454468 HRGP04196 525 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 ENPP1P22413 925 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 IL32P24001 234 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 OTX2P32243 289 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 PRSS12P56730 875 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 ACY1Q03154 408 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 RAB11BQ15907 218 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 YIF1BQ5BJH7 314 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 GPR139Q6DWJ6 353 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 GALNTL5Q7Z4T8 443 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 ADAMTS14Q8WXS8 1223 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 ABHD6Q9BV23 337 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 SERINC1Q9NRX5 453 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 OR5V1Q9UGF6 321 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 CLDN16Q9Y5I7 305 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 PCNX3Q9H6A9 2034 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 ATP6V1G2-DDX39BF2Z307 99 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 NPIPB9F8W1W9 429 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 M0QYG6 137 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 ALX3O95076 343 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 CELA2AP08217 269 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 ACSM1Q08AH1 577 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 SLC35D3Q5M8T2 416 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 GRINAQ7Z429 371 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 ADGRG3Q86Y34 549 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 ZNF687Q8N1G0 1237 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 OR56B4Q8NH76 319 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 CREB3L1Q96BA8 519 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 SNX18Q96RF0 628 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 PDCD10Q9BUL8 212 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 CAMK2AQ9UQM7 478 aa10.8□□□□□ -0.68
SMPD4-213ENST00000454468 F5H5K5 113 aa10.79□□□□□ -0.68
SMPD4-213ENST00000454468 OR2T1O43869 369 aa10.79□□□□□ -0.68
SMPD4-213ENST00000454468 ALDOBP05062 364 aa10.79□□□□□ -0.68
SMPD4-213ENST00000454468 RAD52P43351 418 aa10.79□□□□□ -0.68
SMPD4-213ENST00000454468 RAB14P61106 215 aa10.79□□□□□ -0.68
SMPD4-213ENST00000454468 CHAF1BQ13112 559 aa10.79□□□□□ -0.68
SMPD4-213ENST00000454468 IGSF11Q5DX21 431 aa10.79□□□□□ -0.68
SMPD4-213ENST00000454468 LRRC18Q8N456 261 aa10.79□□□□□ -0.68
SMPD4-213ENST00000454468 OR13C9Q8NGT0 318 aa10.79□□□□□ -0.68
SMPD4-213ENST00000454468 CASTOR1Q8WTX7 329 aa10.79□□□□□ -0.68
SMPD4-213ENST00000454468 SLC41A2Q96JW4 573 aa10.79□□□□□ -0.68
SMPD4-213ENST00000454468 UQCC2Q9BRT2 126 aa10.79□□□□□ -0.68
SMPD4-213ENST00000454468 OCIAD1Q9NX40 245 aa10.79□□□□□ -0.68
SMPD4-213ENST00000454468 MOKQ9UQ07 419 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms