RNA–Protein interactions for RNA: ENST00000454323.1

CUL3-208, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-208ENST00000454323 ATP5SQ99766 215 aa3.79□□□□□ -1.8
CUL3-208ENST00000454323 PORCNQ9H237 461 aa3.79□□□□□ -1.8
CUL3-208ENST00000454323 RGCCQ9H4X1 137 aa3.79□□□□□ -1.8
CUL3-208ENST00000454323 TBX21Q9UL17 535 aa3.79□□□□□ -1.8
CUL3-208ENST00000454323 ZFHX4Q86UP3 3567 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 OTOFQ9HC10 1997 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 GAKO14976 1311 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 IGHV1OR15-1A0A075B7D0 117 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 KCNE1BA0A087WTH5 132 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 IGHV1OR21-1A0A087WYE8 117 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 SMIM28A0A1B0GU29 152 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 A0A1W2PNU3 283 aaPredicted RBP3.78□□□□□ -1.8
CUL3-208ENST00000454323 GOSR2O14653 212 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 GPAA1O43292 621 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 MBTPS2O43462 519 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 HCRTR1O43613 425 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 IGHV3-13P01766 116 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 IGHV2-5P01817 119 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 S100A9P06702 114 aaKnown RBP3.78□□□□□ -1.8
CUL3-208ENST00000454323 ANXA5P08758 320 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 RBMY1CP0DJD4 496 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 CYBAP13498 195 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 TFPI2P48307 235 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 RFX3P48380 749 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 TMED10P49755 219 aaKnown RBP3.78□□□□□ -1.8
CUL3-208ENST00000454323 CCNHP51946 323 aaPredicted RBP3.78□□□□□ -1.8
CUL3-208ENST00000454323 GPX6P59796 221 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 RAB11AP62491 216 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 IRX3P78415 501 aaPredicted RBP3.78□□□□□ -1.8
CUL3-208ENST00000454323 CXCL6P80162 114 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 SELENBP1Q13228 472 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 WDR43Q15061 677 aaKnown RBP eCLIP3.78□□□□□ -1.8
CUL3-208ENST00000454323 RAB11BQ15907 218 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 LRRC36Q1X8D7 754 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 QRICH1Q2TAL8 776 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 PARP15Q460N3 678 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 PAN3Q58A45 887 aaKnown RBP3.78□□□□□ -1.8
CUL3-208ENST00000454323 OR2B11Q5JQS5 317 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 TWF2Q6IBS0 349 aaKnown RBP3.78□□□□□ -1.8
CUL3-208ENST00000454323 C11orf71Q6IPW1 123 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 REEP3Q6NUK4 255 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 WDR74Q6RFH5 385 aaPredicted RBP3.78□□□□□ -1.8
CUL3-208ENST00000454323 C2orf66Q6UXQ4 117 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 ZNF836Q6ZNA1 936 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 STXBP4Q6ZWJ1 553 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 SLC16A14Q7RTX9 510 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 SLC25A42Q86VD7 318 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 PPP1R27Q86WC6 154 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 KRTAP7-1Q8IUC3 87 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 MMAAQ8IVH4 418 aaKnown RBP3.78□□□□□ -1.8
CUL3-208ENST00000454323 NAXDQ8IW45 347 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 FTMTQ8N4E7 242 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 FBXL13Q8NEE6 735 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 CHCHD10Q8WYQ3 142 aaPredicted RBP3.78□□□□□ -1.8
CUL3-208ENST00000454323 CMTM7Q96FZ5 175 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 OR5M11Q96RB7 305 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 OR8B4Q96RC9 309 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 SH3GL1Q99961 368 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 TMEM59Q9BXS4 323 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 C8orf33Q9H7E9 229 aaPredicted RBP3.78□□□□□ -1.8
CUL3-208ENST00000454323 UGT1A10Q9HAW8 530 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 LY9Q9HBG7 655 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.78□□□□□ -1.8
CUL3-208ENST00000454323 GIN1Q9NXP7 522 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 RHBDD3Q9Y3P4 386 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 SIPA1L3O60292 1781 aaPredicted RBP3.78□□□□□ -1.8
CUL3-208ENST00000454323 LAMB1P07942 1786 aa3.78□□□□□ -1.8
CUL3-208ENST00000454323 IGLV3-22A0A075B6J6 115 aa3.77□□□□□ -1.81
CUL3-208ENST00000454323 TRBV9A0A0B4J1U6 114 aa3.77□□□□□ -1.81
CUL3-208ENST00000454323 KBTBD11-OT1A0A1B0GTJ5 212 aa3.77□□□□□ -1.81
CUL3-208ENST00000454323 SMCO2A6NFE2 343 aa3.77□□□□□ -1.81
CUL3-208ENST00000454323 LRRIQ3A6PVS8 624 aaPredicted RBP3.77□□□□□ -1.81
CUL3-208ENST00000454323 E9PQ18 207 aa3.77□□□□□ -1.81
CUL3-208ENST00000454323 K7N7A8 449 aa3.77□□□□□ -1.81
CUL3-208ENST00000454323 SIRPB1O00241 398 aa3.77□□□□□ -1.81
CUL3-208ENST00000454323 CCL21O00585 134 aa3.77□□□□□ -1.81
CUL3-208ENST00000454323 NDUFAB1O14561 156 aa3.77□□□□□ -1.81
CUL3-208ENST00000454323 C2P06681 752 aa3.77□□□□□ -1.81
CUL3-208ENST00000454323 PLEKP08567 350 aaPredicted RBP3.77□□□□□ -1.81
CUL3-208ENST00000454323 MYL2P10916 166 aa3.77□□□□□ -1.81
CUL3-208ENST00000454323 TBPP20226 339 aa3.77□□□□□ -1.81
CUL3-208ENST00000454323 AQP1P29972 269 aa3.77□□□□□ -1.81
CUL3-208ENST00000454323 CD47Q08722 323 aa3.77□□□□□ -1.81
CUL3-208ENST00000454323 SLC22A6Q4U2R8 563 aa3.77□□□□□ -1.81
CUL3-208ENST00000454323 GTSCR1Q86UQ5 136 aa3.77□□□□□ -1.81
CUL3-208ENST00000454323 OR9G4Q8NGQ1 327 aa3.77□□□□□ -1.81
CUL3-208ENST00000454323 OR1S2Q8NGQ3 325 aa3.77□□□□□ -1.81
CUL3-208ENST00000454323 FAM151AQ8WW52 585 aa3.77□□□□□ -1.81
CUL3-208ENST00000454323 KIAA1143Q96AT1 154 aaPredicted RBP3.77□□□□□ -1.81
CUL3-208ENST00000454323 CCDC126Q96EE4 140 aa3.77□□□□□ -1.81
CUL3-208ENST00000454323 SLC29A1Q99808 456 aa3.77□□□□□ -1.81
CUL3-208ENST00000454323 UPF3BQ9BZI7 483 aaKnown RBP3.77□□□□□ -1.81
CUL3-208ENST00000454323 UBXN6Q9BZV1 441 aa3.77□□□□□ -1.81
CUL3-208ENST00000454323 SELENOIQ9C0D9 397 aa3.77□□□□□ -1.81
CUL3-208ENST00000454323 TMEM165Q9HC07 324 aa3.77□□□□□ -1.81
CUL3-208ENST00000454323 FGF20Q9NP95 211 aaPredicted RBP3.77□□□□□ -1.81
CUL3-208ENST00000454323 CLN8Q9UBY8 286 aa3.77□□□□□ -1.81
CUL3-208ENST00000454323 UBQLN1Q9UMX0 589 aaKnown RBP3.77□□□□□ -1.81
CUL3-208ENST00000454323 MOB4Q9Y3A3 225 aa3.77□□□□□ -1.81
CUL3-208ENST00000454323 LAMB2P55268 1798 aa3.76□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms