RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 RASSF6Q6ZTQ3 369 aa7.75□□□□□ -1.17
COL8A1-203ENST00000452013 GPR141Q7Z602 305 aa7.75□□□□□ -1.17
COL8A1-203ENST00000452013 WDFY1Q8IWB7 410 aa7.75□□□□□ -1.17
COL8A1-203ENST00000452013 SKA3Q8IX90 412 aa7.75□□□□□ -1.17
COL8A1-203ENST00000452013 AQP11Q8NBQ7 271 aa7.75□□□□□ -1.17
COL8A1-203ENST00000452013 ZNF519Q8TB69 540 aa7.75□□□□□ -1.17
COL8A1-203ENST00000452013 GIPC3Q8TF64 312 aa7.75□□□□□ -1.17
COL8A1-203ENST00000452013 NRBF2Q96F24 287 aa7.75□□□□□ -1.17
COL8A1-203ENST00000452013 SAMD8Q96LT4 415 aa7.75□□□□□ -1.17
COL8A1-203ENST00000452013 Q96M85 177 aa7.75□□□□□ -1.17
COL8A1-203ENST00000452013 ERMAPQ96PL5 475 aaPredicted RBP7.75□□□□□ -1.17
COL8A1-203ENST00000452013 SLC38A2Q96QD8 506 aa7.75□□□□□ -1.17
COL8A1-203ENST00000452013 IFT27Q9BW83 186 aa7.75□□□□□ -1.17
COL8A1-203ENST00000452013 OR52D1Q9H346 318 aa7.75□□□□□ -1.17
COL8A1-203ENST00000452013 NELFAQ9H3P2 528 aa7.75□□□□□ -1.17
COL8A1-203ENST00000452013 LIME1Q9H400 295 aa7.75□□□□□ -1.17
COL8A1-203ENST00000452013 RNF121Q9H920 327 aa7.75□□□□□ -1.17
COL8A1-203ENST00000452013 SIAEQ9HAT2 523 aa7.75□□□□□ -1.17
COL8A1-203ENST00000452013 TMEM38BQ9NVV0 291 aa7.75□□□□□ -1.17
COL8A1-203ENST00000452013 B3GNT2Q9NY97 397 aa7.75□□□□□ -1.17
COL8A1-203ENST00000452013 CISD1Q9NZ45 108 aaKnown RBP7.75□□□□□ -1.17
COL8A1-203ENST00000452013 NPAP1Q9NZP6 1156 aa7.75□□□□□ -1.17
COL8A1-203ENST00000452013 CRNNQ9UBG3 495 aaPredicted RBP7.75□□□□□ -1.17
COL8A1-203ENST00000452013 POU2F3Q9UKI9 436 aa7.75□□□□□ -1.17
COL8A1-203ENST00000452013 ITGB1BP2Q9UKP3 347 aa7.75□□□□□ -1.17
COL8A1-203ENST00000452013 BLOC1S6Q9UL45 172 aa7.75□□□□□ -1.17
COL8A1-203ENST00000452013 IGHV1-18A0A0C4DH31 117 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 TEX13CA0A0J9YWL9 993 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 A0A1W2PPR1 153 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 SLC22A23A1A5C7 686 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 PRSS37A4D1T9 235 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 CCDC160A6NGH7 325 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 KHDRBS3O75525 346 aaKnown RBP7.74□□□□□ -1.17
COL8A1-203ENST00000452013 TIPRLO75663 272 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 SEC14L2O76054 403 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 RAB36O95755 333 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 TXNDC12O95881 172 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 IGKV3-15P01624 115 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 HLA-HP01893 362 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 B4GALT1P15291 398 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 NOS3P29474 1203 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 IST1P53990 364 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 TUBA1BP68363 451 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 MRPS34P82930 218 aaKnown RBP7.74□□□□□ -1.17
COL8A1-203ENST00000452013 PLP2Q04941 152 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 PIGFQ07326 219 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 PPP1R8Q12972 351 aaKnown RBP7.74□□□□□ -1.17
COL8A1-203ENST00000452013 IL18R1Q13478 541 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 SGCAQ16586 387 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 GSG1Q2KHT4 349 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 RBM48Q5RL73 367 aaKnown RBP7.74□□□□□ -1.17
COL8A1-203ENST00000452013 ZNF770Q6IQ21 691 aaPredicted RBP7.74□□□□□ -1.17
COL8A1-203ENST00000452013 DNM1P34Q6PK57 102 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 THSD4Q6ZMP0 1018 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 LINC00299Q6ZSB3 139 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 TUBA1AQ71U36 451 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 SLC16A14Q7RTX9 510 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 FAM122BQ7Z309 247 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 ADCK1Q86TW2 530 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 CBR4Q8N4T8 237 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 CLDN22Q8N7P3 220 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 OR4F15Q8NGB8 312 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 OR10G2Q8NGC3 310 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 OR9Q2Q8NGE9 314 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 OR52L1Q8NGH7 329 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 FANK1Q8TC84 345 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 SMAP2Q8WU79 429 aaPredicted RBP7.74□□□□□ -1.17
COL8A1-203ENST00000452013 NSMAFQ92636 917 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 NRGNQ92686 78 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 FBXW5Q969U6 566 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 NMD3Q96D46 503 aaKnown RBP7.74□□□□□ -1.17
COL8A1-203ENST00000452013 MBD6Q96DN6 1003 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 CIB1Q99828 191 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 BCL7BQ9BQE9 202 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 WACQ9BTA9 647 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 DGCR6LQ9BY27 220 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 GRIP2Q9C0E4 1043 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 SEMA6AQ9H2E6 1030 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 SEC61A2Q9H9S3 476 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 ZNF556Q9HAH1 456 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 FAIMQ9NVQ4 179 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 BEX4Q9NWD9 120 aaPredicted RBP7.74□□□□□ -1.17
COL8A1-203ENST00000452013 IL20Q9NYY1 176 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 PDP1Q9P0J1 537 aaPredicted RBP7.74□□□□□ -1.17
COL8A1-203ENST00000452013 IL20RAQ9UHF4 553 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 BAIAP2Q9UQB8 552 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 PLEKHA6Q9Y2H5 1048 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 ADAM18Q9Y3Q7 739 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 SPEF1Q9Y4P9 236 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 ATP23Q9Y6H3 246 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 CEPT1Q9Y6K0 416 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 HEATR5AQ86XA9 2040 aa7.74□□□□□ -1.17
COL8A1-203ENST00000452013 UTP20O75691 2785 aaKnown RBP7.74□□□□□ -1.17
COL8A1-203ENST00000452013 DIDO1Q9BTC0 2240 aaKnown RBP7.74□□□□□ -1.17
COL8A1-203ENST00000452013 DOPEY2Q9Y3R5 2298 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 ARHGAP21Q5T5U3 1957 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 ARRDC5A6NEK1 342 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 SOCS2O14508 198 aa7.73□□□□□ -1.17
COL8A1-203ENST00000452013 MRPS14O60783 128 aaKnown RBP7.73□□□□□ -1.17
COL8A1-203ENST00000452013 NOL3O60936 208 aaKnown RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms