RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 ACTA1P68133 377 aa17.01■□□□□ 0.31
RPS28-202ENST00000449223 PIGFQ07326 219 aa17.01■□□□□ 0.31
RPS28-202ENST00000449223 TBCEQ15813 527 aaPredicted RBP17.01■□□□□ 0.31
RPS28-202ENST00000449223 KCNMB1Q16558 191 aa17.01■□□□□ 0.31
RPS28-202ENST00000449223 TEX30Q5JUR7 227 aa17.01■□□□□ 0.31
RPS28-202ENST00000449223 TSPO2Q5TGU0 170 aa17.01■□□□□ 0.31
RPS28-202ENST00000449223 LYPD4Q6UWN0 246 aa17.01■□□□□ 0.31
RPS28-202ENST00000449223 SLC16A9Q7RTY1 509 aa17.01■□□□□ 0.31
RPS28-202ENST00000449223 GPR137CQ8N3F9 429 aa17.01■□□□□ 0.31
RPS28-202ENST00000449223 ACBD7Q8N6N7 88 aa17.01■□□□□ 0.31
RPS28-202ENST00000449223 ZNF511Q8NB15 262 aa17.01■□□□□ 0.31
RPS28-202ENST00000449223 OR6K3Q8NGY3 331 aa17.01■□□□□ 0.31
RPS28-202ENST00000449223 OR2T27Q8NH04 317 aa17.01■□□□□ 0.31
RPS28-202ENST00000449223 EMC9Q9Y3B6 208 aa17.01■□□□□ 0.31
RPS28-202ENST00000449223 CNOT4O95628 575 aaKnown RBP17.01■□□□□ 0.31
RPS28-202ENST00000449223 EDNRAP25101 427 aa17.01■□□□□ 0.31
RPS28-202ENST00000449223 ATP6V1E1P36543 226 aa17.01■□□□□ 0.31
RPS28-202ENST00000449223 KIR2DL2P43627 348 aaPredicted RBP17.01■□□□□ 0.31
RPS28-202ENST00000449223 NRN1LQ496H8 165 aa17.01■□□□□ 0.31
RPS28-202ENST00000449223 SVOPQ8N4V2 548 aa17.01■□□□□ 0.31
RPS28-202ENST00000449223 INTS14Q96SY0 518 aa17.01■□□□□ 0.31
RPS28-202ENST00000449223 TTYH2Q9BSA4 534 aa17.01■□□□□ 0.31
RPS28-202ENST00000449223 YIPF3Q9GZM5 350 aa17.01■□□□□ 0.31
RPS28-202ENST00000449223 RERGLQ9H628 205 aa17.01■□□□□ 0.31
RPS28-202ENST00000449223 CRLF2Q9HC73 371 aa17.01■□□□□ 0.31
RPS28-202ENST00000449223 SLC7A10Q9NS82 523 aa17.01■□□□□ 0.31
RPS28-202ENST00000449223 SNX5Q9Y5X3 404 aa17.01■□□□□ 0.31
RPS28-202ENST00000449223 TNFSF13O75888 250 aa17■□□□□ 0.31
RPS28-202ENST00000449223 APOL3O95236 402 aa17■□□□□ 0.31
RPS28-202ENST00000449223 CLPTM1O96005 669 aa17■□□□□ 0.31
RPS28-202ENST00000449223 EMX1Q04741 257 aaPredicted RBP17■□□□□ 0.31
RPS28-202ENST00000449223 XAF1Q6GPH4 301 aa17■□□□□ 0.31
RPS28-202ENST00000449223 ZNF627Q7L945 461 aa17■□□□□ 0.31
RPS28-202ENST00000449223 LINGO2Q7L985 606 aa17■□□□□ 0.31
RPS28-202ENST00000449223 EGFL6Q8IUX8 553 aa17■□□□□ 0.31
RPS28-202ENST00000449223 GCNT2Q8N0V5 402 aa17■□□□□ 0.31
RPS28-202ENST00000449223 NSMAFQ92636 917 aa17■□□□□ 0.31
RPS28-202ENST00000449223 ALKBH3Q96Q83 286 aaPredicted RBP17■□□□□ 0.31
RPS28-202ENST00000449223 CCDC90BQ9GZT6 254 aa17■□□□□ 0.31
RPS28-202ENST00000449223 KCNG2Q9UJ96 466 aa17■□□□□ 0.31
RPS28-202ENST00000449223 COL6A6A6NMZ7 2263 aa16.99■□□□□ 0.31
RPS28-202ENST00000449223 INTS1Q8N201 2190 aaKnown RBP16.99■□□□□ 0.31
RPS28-202ENST00000449223 TMEM129A0AVI4 362 aa16.99■□□□□ 0.31
RPS28-202ENST00000449223 C12orf71A8MTZ7 269 aa16.99■□□□□ 0.31
RPS28-202ENST00000449223 SELENOFO60613 162 aa16.99■□□□□ 0.31
RPS28-202ENST00000449223 MRPL3P09001 348 aaKnown RBP16.99■□□□□ 0.31
RPS28-202ENST00000449223 LIMS3P0CW19 117 aa16.99■□□□□ 0.31
RPS28-202ENST00000449223 LIMS4P0CW20 117 aa16.99■□□□□ 0.31
RPS28-202ENST00000449223 ATP6V1B1P15313 513 aa16.99■□□□□ 0.31
RPS28-202ENST00000449223 ZNF84P51523 738 aa16.99■□□□□ 0.31
RPS28-202ENST00000449223 MRPS34P82930 218 aaKnown RBP16.99■□□□□ 0.31
RPS28-202ENST00000449223 NFATC3Q12968 1075 aa16.99■□□□□ 0.31
RPS28-202ENST00000449223 TMEM154Q6P9G4 183 aa16.99■□□□□ 0.31
RPS28-202ENST00000449223 TFAP2EQ6VUC0 442 aa16.99■□□□□ 0.31
RPS28-202ENST00000449223 SHFQ7M4L6 423 aa16.99■□□□□ 0.31
RPS28-202ENST00000449223 CDC20BQ86Y33 519 aa16.99■□□□□ 0.31
RPS28-202ENST00000449223 SLC35F2Q8IXU6 374 aa16.99■□□□□ 0.31
RPS28-202ENST00000449223 ZNF100Q8IYN0 542 aa16.99■□□□□ 0.31
RPS28-202ENST00000449223 NABP1Q96AH0 204 aa16.99■□□□□ 0.31
RPS28-202ENST00000449223 NELFAQ9H3P2 528 aa16.99■□□□□ 0.31
RPS28-202ENST00000449223 WDR76Q9H967 626 aa16.99■□□□□ 0.31
RPS28-202ENST00000449223 GPR35Q9HC97 309 aa16.99■□□□□ 0.31
RPS28-202ENST00000449223 ACOT13Q9NPJ3 140 aa16.99■□□□□ 0.31
RPS28-202ENST00000449223 POLE4Q9NR33 117 aa16.99■□□□□ 0.31
RPS28-202ENST00000449223 ERVK13-1Q9NX77 482 aa16.99■□□□□ 0.31
RPS28-202ENST00000449223 TVP23AA6NH52 213 aa16.98■□□□□ 0.31
RPS28-202ENST00000449223 GPANK1O95872 356 aa16.98■□□□□ 0.31
RPS28-202ENST00000449223 IL2RAP01589 272 aa16.98■□□□□ 0.31
RPS28-202ENST00000449223 TFAP2AP05549 437 aa16.98■□□□□ 0.31
RPS28-202ENST00000449223 GLI4P10075 376 aa16.98■□□□□ 0.31
RPS28-202ENST00000449223 JUNBP17275 347 aaPredicted RBP16.98■□□□□ 0.31
RPS28-202ENST00000449223 MYL12AP19105 171 aa16.98■□□□□ 0.31
RPS28-202ENST00000449223 NAA10P41227 235 aaPredicted RBP16.98■□□□□ 0.31
RPS28-202ENST00000449223 ENTPD1P49961 510 aa16.98■□□□□ 0.31
RPS28-202ENST00000449223 LSM6P62312 80 aaKnown RBP16.98■□□□□ 0.31
RPS28-202ENST00000449223 BLMHQ13867 455 aa16.98■□□□□ 0.31
RPS28-202ENST00000449223 FBXW9Q5XUX1 488 aa16.98■□□□□ 0.31
RPS28-202ENST00000449223 ABHD12BQ7Z5M8 362 aaPredicted RBP16.98■□□□□ 0.31
RPS28-202ENST00000449223 ERI1Q8IV48 349 aaKnown RBP16.98■□□□□ 0.31
RPS28-202ENST00000449223 RPRMLQ8N4K4 120 aa16.98■□□□□ 0.31
RPS28-202ENST00000449223 OTOSQ8NHW6 89 aa16.98■□□□□ 0.31
RPS28-202ENST00000449223 PLSCR4Q9NRQ2 329 aa16.98■□□□□ 0.31
RPS28-202ENST00000449223 TINAGQ9UJW2 476 aa16.98■□□□□ 0.31
RPS28-202ENST00000449223 TMEM14AQ9Y6G1 99 aa16.98■□□□□ 0.31
RPS28-202ENST00000449223 EIF4E1BA6NMX2 242 aaKnown RBP16.97■□□□□ 0.31
RPS28-202ENST00000449223 ZNF587BE7ETH6 402 aa16.97■□□□□ 0.31
RPS28-202ENST00000449223 HLA-DQA2P01906 255 aa16.97■□□□□ 0.31
RPS28-202ENST00000449223 NPR2P20594 1047 aa16.97■□□□□ 0.31
RPS28-202ENST00000449223 ETV1P50549 477 aa16.97■□□□□ 0.31
RPS28-202ENST00000449223 NR1H2P55055 460 aa16.97■□□□□ 0.31
RPS28-202ENST00000449223 PER3P56645 1201 aa16.97■□□□□ 0.31
RPS28-202ENST00000449223 ADAM8P78325 824 aa16.97■□□□□ 0.31
RPS28-202ENST00000449223 ROR2Q01974 943 aaKnown RBP16.97■□□□□ 0.31
RPS28-202ENST00000449223 GALEQ14376 348 aa16.97■□□□□ 0.31
RPS28-202ENST00000449223 UBE2UQ5VVX9 321 aa16.97■□□□□ 0.31
RPS28-202ENST00000449223 KCTD8Q6ZWB6 473 aa16.97■□□□□ 0.31
RPS28-202ENST00000449223 NANOGP1Q8N7R0 232 aa16.97■□□□□ 0.31
RPS28-202ENST00000449223 ZNF485Q8NCK3 441 aa16.97■□□□□ 0.31
RPS28-202ENST00000449223 OR10H4Q8NGA5 316 aa16.97■□□□□ 0.31
RPS28-202ENST00000449223 C11orf40Q8WZ69 217 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms