RNA–Protein interactions for RNA: ENST00000449131.6

BEST1-202, Transcript of bestrophin 1, humanhuman

TSL 1 (best) BASIC

Gene BEST1, Length 4,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-202ENST00000449131 LIMS3P0CW19 117 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 LIMS4P0CW20 117 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 IFNGR1P15260 489 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 CRYBB2P43320 205 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 PPICP45877 212 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 FASLGP48023 281 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 P2RX3P56373 397 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 HTRA4P83105 476 aaPredicted RBP6.53□□□□□ -1.36
BEST1-202ENST00000449131 ACKR1Q16570 336 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 SLC25A35Q3KQZ1 300 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 SLC36A2Q495M3 483 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 C9orf135Q5VTT2 229 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 FCRL6Q6DN72 434 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 MEX3BQ6ZN04 569 aaKnown RBP6.53□□□□□ -1.36
BEST1-202ENST00000449131 PRSS41Q7RTY9 318 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 SYS1Q8N2H4 156 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 OR4K15Q8NH41 348 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 FNDC9Q8TBE3 224 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 C3orf49Q96BT1 292 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 SMIM19Q96E16 107 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 TRMT61AQ96FX7 289 aaKnown RBP6.53□□□□□ -1.36
BEST1-202ENST00000449131 SMIM3Q9BZL3 60 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 C20orf141Q9NUB4 165 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 A0A0A6YYJ9 748 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 SLC33A1O00400 549 aaPredicted RBP6.53□□□□□ -1.36
BEST1-202ENST00000449131 EIF4E2O60573 245 aaKnown RBP6.53□□□□□ -1.36
BEST1-202ENST00000449131 SOD1P00441 154 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 MT-ATP6P00846 226 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 M6PRP20645 277 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 SDHAP31040 664 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 ETV6P41212 452 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 BDH1Q02338 343 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 CREB3L2Q70SY1 520 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 MRPL21Q7Z2W9 205 aaKnown RBP6.53□□□□□ -1.36
BEST1-202ENST00000449131 MISPQ8IVT2 679 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 ETFBKMTQ8IXQ9 262 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 CMTM4Q8IZR5 234 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 OR51S1Q8NGJ8 323 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 OR6M1Q8NGM8 313 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 ATOH1Q92858 354 aaPredicted RBP6.53□□□□□ -1.36
BEST1-202ENST00000449131 RAB3CQ96E17 227 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 DCLRE1CQ96SD1 692 aaKnown RBP6.53□□□□□ -1.36
BEST1-202ENST00000449131 MED18Q9BUE0 208 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 BARHL1Q9BZE3 327 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 OR51B6Q9H340 312 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 FBXO34Q9NWN3 711 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 SLC23A1Q9UHI7 598 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 WASF3Q9UPY6 502 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 EXO1Q9UQ84 846 aaKnown RBP6.53□□□□□ -1.36
BEST1-202ENST00000449131 ZNF646O15015 1829 aaPredicted RBP6.53□□□□□ -1.36
BEST1-202ENST00000449131 RANBP2P49792 3224 aaKnown RBP6.53□□□□□ -1.36
BEST1-202ENST00000449131 LOC100289279A0A1B0GTE1 492 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 hCG_1807616A0A1W2PRN6 198 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 SSX5O60225 188 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 ZNF780AO75290 641 aaPredicted RBP6.53□□□□□ -1.36
BEST1-202ENST00000449131 RGS11O94810 467 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 IFNA5P01569 189 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 CDK2P24941 298 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 DPP4P27487 766 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 GDF1P27539 372 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 S100A2P29034 98 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 GZMKP49863 264 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 C21orf58P58505 322 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 SEC61A1P61619 476 aaKnown RBP6.53□□□□□ -1.36
BEST1-202ENST00000449131 IFITM2Q01629 132 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 NKAIN1Q4KMZ8 207 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 H1FNTQ75WM6 255 aaPredicted RBP6.53□□□□□ -1.36
BEST1-202ENST00000449131 SULF2Q8IWU5 870 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 ARL6IP6Q8N6S5 226 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 ARIH2OSQ8N7S6 290 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 ZSCAN1Q8NBB4 408 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 AGBL5Q8NDL9 886 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 NT5CQ8TCD5 201 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 PAQR8Q8TEZ7 354 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 PIGCQ92535 297 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 DCBLD2Q96PD2 775 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 ATF6BQ99941 703 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 AUNIPQ9H7T9 357 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 FBXL4Q9UKA2 621 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 MRPS28Q9Y2Q9 187 aaKnown RBP6.53□□□□□ -1.36
BEST1-202ENST00000449131 UNC13CQ8NB66 2214 aa6.53□□□□□ -1.36
BEST1-202ENST00000449131 OTOFQ9HC10 1997 aa6.52□□□□□ -1.37
BEST1-202ENST00000449131 FFAR1O14842 300 aa6.52□□□□□ -1.37
BEST1-202ENST00000449131 TSPAN15O95858 294 aa6.52□□□□□ -1.37
BEST1-202ENST00000449131 FCGR2AP12318 317 aa6.52□□□□□ -1.37
BEST1-202ENST00000449131 ZNF93P35789 620 aaPredicted RBP6.52□□□□□ -1.37
BEST1-202ENST00000449131 GZMMP51124 257 aa6.52□□□□□ -1.37
BEST1-202ENST00000449131 P2RX1P51575 399 aa6.52□□□□□ -1.37
BEST1-202ENST00000449131 RSPRY1Q96DX4 576 aa6.52□□□□□ -1.37
BEST1-202ENST00000449131 COX14Q96I36 57 aa6.52□□□□□ -1.37
BEST1-202ENST00000449131 RNF170Q96K19 258 aa6.52□□□□□ -1.37
BEST1-202ENST00000449131 SGCZQ96LD1 299 aa6.52□□□□□ -1.37
BEST1-202ENST00000449131 DERL3Q96Q80 235 aa6.52□□□□□ -1.37
BEST1-202ENST00000449131 ZNF175Q9Y473 711 aa6.52□□□□□ -1.37
BEST1-202ENST00000449131 A0A1W2PPC4 97 aa6.52□□□□□ -1.37
BEST1-202ENST00000449131 IFITM5A6NNB3 132 aa6.52□□□□□ -1.37
BEST1-202ENST00000449131 ICOSLGO75144 302 aa6.52□□□□□ -1.37
BEST1-202ENST00000449131 ALOX12BO75342 701 aa6.52□□□□□ -1.37
BEST1-202ENST00000449131 TPT1P13693 172 aaKnown RBP6.52□□□□□ -1.37
BEST1-202ENST00000449131 POU3F2P20265 443 aaPredicted RBP6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms