RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 CDKN1AP38936 164 aa12.65□□□□□ -0.38
USP39-206ENST00000448971 GIPRP48546 466 aa12.65□□□□□ -0.38
USP39-206ENST00000448971 FABP6P51161 128 aa12.65□□□□□ -0.38
USP39-206ENST00000448971 TRAP1Q12931 704 aaKnown RBP12.65□□□□□ -0.38
USP39-206ENST00000448971 BNIP1Q12981 228 aa12.65□□□□□ -0.38
USP39-206ENST00000448971 TNK1Q13470 666 aa12.65□□□□□ -0.38
USP39-206ENST00000448971 KRR1Q13601 381 aaKnown RBP12.65□□□□□ -0.38
USP39-206ENST00000448971 HIST3H3Q16695 136 aa12.65□□□□□ -0.38
USP39-206ENST00000448971 PGGHGQ32M88 737 aa12.65□□□□□ -0.38
USP39-206ENST00000448971 C3orf36Q3SXR2 165 aa12.65□□□□□ -0.38
USP39-206ENST00000448971 C10orf128Q5T292 105 aa12.65□□□□□ -0.38
USP39-206ENST00000448971 AGAP6Q5VW22 663 aa12.65□□□□□ -0.38
USP39-206ENST00000448971 SLC16A14Q7RTX9 510 aa12.65□□□□□ -0.38
USP39-206ENST00000448971 MYPOPQ86VE0 399 aaPredicted RBP12.65□□□□□ -0.38
USP39-206ENST00000448971 SPATA24Q86W54 205 aa12.65□□□□□ -0.38
USP39-206ENST00000448971 FBXL14Q8N1E6 418 aa12.65□□□□□ -0.38
USP39-206ENST00000448971 CLDN22Q8N7P3 220 aa12.65□□□□□ -0.38
USP39-206ENST00000448971 FAM169BQ8N8A8 192 aa12.65□□□□□ -0.38
USP39-206ENST00000448971 RBP7Q96R05 134 aa12.65□□□□□ -0.38
USP39-206ENST00000448971 REEP1Q9H902 201 aa12.65□□□□□ -0.38
USP39-206ENST00000448971 SMURF2Q9HAU4 748 aa12.65□□□□□ -0.38
USP39-206ENST00000448971 A0A1W2PPL8 197 aa12.64□□□□□ -0.39
USP39-206ENST00000448971 DHRS12A0PJE2 317 aa12.64□□□□□ -0.39
USP39-206ENST00000448971 AQP12BA6NM10 295 aa12.64□□□□□ -0.39
USP39-206ENST00000448971 ACOT8O14734 319 aa12.64□□□□□ -0.39
USP39-206ENST00000448971 CCNB2O95067 398 aa12.64□□□□□ -0.39
USP39-206ENST00000448971 ZNF26P17031 533 aaPredicted RBP12.64□□□□□ -0.39
USP39-206ENST00000448971 RASSF2P50749 326 aa12.64□□□□□ -0.39
USP39-206ENST00000448971 RPS6KA3P51812 740 aa12.64□□□□□ -0.39
USP39-206ENST00000448971 RAB1AP62820 205 aa12.64□□□□□ -0.39
USP39-206ENST00000448971 SLC36A2Q495M3 483 aa12.64□□□□□ -0.39
USP39-206ENST00000448971 MESTQ5EB52 335 aa12.64□□□□□ -0.39
USP39-206ENST00000448971 ZNF544Q6NX49 715 aa12.64□□□□□ -0.39
USP39-206ENST00000448971 VHLLQ6RSH7 139 aa12.64□□□□□ -0.39
USP39-206ENST00000448971 SMARCD3Q6STE5 483 aa12.64□□□□□ -0.39
USP39-206ENST00000448971 ZER1Q7Z7L7 766 aa12.64□□□□□ -0.39
USP39-206ENST00000448971 SKA3Q8IX90 412 aa12.64□□□□□ -0.39
USP39-206ENST00000448971 AQP12AQ8IXF9 295 aa12.64□□□□□ -0.39
USP39-206ENST00000448971 MUC15Q8N387 334 aa12.64□□□□□ -0.39
USP39-206ENST00000448971 ARIH2OSQ8N7S6 290 aa12.64□□□□□ -0.39
USP39-206ENST00000448971 OR9Q2Q8NGE9 314 aa12.64□□□□□ -0.39
USP39-206ENST00000448971 RASD2Q96D21 266 aa12.64□□□□□ -0.39
USP39-206ENST00000448971 Q96M85 177 aa12.64□□□□□ -0.39
USP39-206ENST00000448971 GPX7Q96SL4 187 aaPredicted RBP12.64□□□□□ -0.39
USP39-206ENST00000448971 GPA33Q99795 319 aa12.64□□□□□ -0.39
USP39-206ENST00000448971 SH3GL3Q99963 347 aa12.64□□□□□ -0.39
USP39-206ENST00000448971 TRAF4Q9BUZ4 470 aaPredicted RBP12.64□□□□□ -0.39
USP39-206ENST00000448971 KCNN2Q9H2S1 579 aa12.64□□□□□ -0.39
USP39-206ENST00000448971 OR52D1Q9H346 318 aa12.64□□□□□ -0.39
USP39-206ENST00000448971 DENND2DQ9H6A0 471 aaPredicted RBP12.64□□□□□ -0.39
USP39-206ENST00000448971 RNF121Q9H920 327 aa12.64□□□□□ -0.39
USP39-206ENST00000448971 ZNF224Q9NZL3 707 aa12.64□□□□□ -0.39
USP39-206ENST00000448971 FBXL3Q9UKT7 428 aa12.64□□□□□ -0.39
USP39-206ENST00000448971 SAMHD1Q9Y3Z3 626 aaKnown RBP12.64□□□□□ -0.39
USP39-206ENST00000448971 U3KQV3 271 aa12.64□□□□□ -0.39
USP39-206ENST00000448971 CR1P17927 2039 aa12.64□□□□□ -0.39
USP39-206ENST00000448971 IGKV1D-43A0A0B4J1Z2 117 aa12.63□□□□□ -0.39
USP39-206ENST00000448971 SOCS2O14508 198 aa12.63□□□□□ -0.39
USP39-206ENST00000448971 PPP1R3DO95685 299 aa12.63□□□□□ -0.39
USP39-206ENST00000448971 PATE4P0C8F1 98 aa12.63□□□□□ -0.39
USP39-206ENST00000448971 CALCRP30988 508 aa12.63□□□□□ -0.39
USP39-206ENST00000448971 SDHAP31040 664 aa12.63□□□□□ -0.39
USP39-206ENST00000448971 SLC6A6P31641 620 aa12.63□□□□□ -0.39
USP39-206ENST00000448971 CDAP32320 146 aa12.63□□□□□ -0.39
USP39-206ENST00000448971 TTKP33981 857 aa12.63□□□□□ -0.39
USP39-206ENST00000448971 GUCA1AP43080 201 aaPredicted RBP12.63□□□□□ -0.39
USP39-206ENST00000448971 ERFP50548 548 aa12.63□□□□□ -0.39
USP39-206ENST00000448971 ATP5J2P56134 94 aa12.63□□□□□ -0.39
USP39-206ENST00000448971 PPP1R8Q12972 351 aaKnown RBP12.63□□□□□ -0.39
USP39-206ENST00000448971 NRN1LQ496H8 165 aa12.63□□□□□ -0.39
USP39-206ENST00000448971 THEM4Q5T1C6 240 aa12.63□□□□□ -0.39
USP39-206ENST00000448971 GPR139Q6DWJ6 353 aa12.63□□□□□ -0.39
USP39-206ENST00000448971 OR2T5Q6IEZ7 315 aa12.63□□□□□ -0.39
USP39-206ENST00000448971 TMEM53Q6P2H8 277 aa12.63□□□□□ -0.39
USP39-206ENST00000448971 PGBD2Q6P3X8 592 aa12.63□□□□□ -0.39
USP39-206ENST00000448971 FAM122BQ7Z309 247 aa12.63□□□□□ -0.39
USP39-206ENST00000448971 DPPA2Q7Z7J5 298 aa12.63□□□□□ -0.39
USP39-206ENST00000448971 DTX2Q86UW9 622 aa12.63□□□□□ -0.39
USP39-206ENST00000448971 ADGRG5Q8IZF4 528 aa12.63□□□□□ -0.39
USP39-206ENST00000448971 LRRC18Q8N456 261 aa12.63□□□□□ -0.39
USP39-206ENST00000448971 LINC00471Q8N535 108 aa12.63□□□□□ -0.39
USP39-206ENST00000448971 OR2T29Q8NH02 315 aa12.63□□□□□ -0.39
USP39-206ENST00000448971 GNPDA2Q8TDQ7 276 aa12.63□□□□□ -0.39
USP39-206ENST00000448971 NMD3Q96D46 503 aaKnown RBP12.63□□□□□ -0.39
USP39-206ENST00000448971 TRMT61AQ96FX7 289 aaKnown RBP12.63□□□□□ -0.39
USP39-206ENST00000448971 CCNB1IP1Q9NPC3 277 aa12.63□□□□□ -0.39
USP39-206ENST00000448971 NRIP3Q9NQ35 241 aa12.63□□□□□ -0.39
USP39-206ENST00000448971 CBLN4Q9NTU7 201 aa12.63□□□□□ -0.39
USP39-206ENST00000448971 B3GNT2Q9NY97 397 aa12.63□□□□□ -0.39
USP39-206ENST00000448971 IGHV2OR16-5A0A0B4J2B6 119 aa12.62□□□□□ -0.39
USP39-206ENST00000448971 POM121CA8CG34 1229 aa12.62□□□□□ -0.39
USP39-206ENST00000448971 GNGT2O14610 69 aa12.62□□□□□ -0.39
USP39-206ENST00000448971 PTP4A3O75365 173 aa12.62□□□□□ -0.39
USP39-206ENST00000448971 ATP5HO75947 161 aa12.62□□□□□ -0.39
USP39-206ENST00000448971 CST1P01037 141 aa12.62□□□□□ -0.39
USP39-206ENST00000448971 NPR2P20594 1047 aa12.62□□□□□ -0.39
USP39-206ENST00000448971 ZNF133P52736 654 aaPredicted RBP12.62□□□□□ -0.39
USP39-206ENST00000448971 FXYD6P3P58550 94 aa12.62□□□□□ -0.39
USP39-206ENST00000448971 MRPS34P82930 218 aaKnown RBP12.62□□□□□ -0.39
USP39-206ENST00000448971 TSPAN31Q12999 210 aa12.62□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms