RNA–Protein interactions for RNA: ENST00000448940.5

CDC42BPA-209, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 7,355 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-209ENST00000448940 PHYHO14832 338 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 BCAS1O75363 584 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 CD8BP10966 210 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 CRHBPP24387 322 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 MAGEA3P43357 314 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 OR3A3P47888 321 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 OR3A2P47893 321 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 SHBQ15464 509 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 PIGGQ5H8A4 983 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 OR5J2Q8NH18 312 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 OR4K13Q8NH42 304 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 SUN5Q8TC36 379 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 MYDGFQ969H8 173 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZMYND19Q96E35 227 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 QRSL1Q9H0R6 528 aaKnown RBP5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 B3GNT2Q9NY97 397 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 RHCGQ9UBD6 479 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 FAM230AA0A1W2PPH8 454 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 FOXS1O43638 330 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 ITM2AO43736 263 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 KCNK2O95069 426 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 ATP6V1G2O95670 118 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 HTR1AP08908 422 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 IGFBP5P24593 272 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 S100A5P33763 92 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 BSGP35613 385 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 CEACAM3P40198 252 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 OR1E2P47887 323 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 CDK5R2Q13319 367 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 RGNQ15493 299 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 SYPL1Q16563 259 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 SH2D5Q6ZV89 423 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 FAM214BQ7L5A3 538 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 ANKRD53Q8N9V6 530 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 OR7G2Q8NG99 324 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZNF675Q8TD23 568 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 NEDD4LQ96PU5 975 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 OR52B2Q96RD2 323 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 ACER3Q9NUN7 267 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZNF221Q9UK13 617 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 PPP1R3CQ9UQK1 317 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 TAPBPO15533 448 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 IFNA7P01567 189 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 NCK1P16333 377 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 CASP3P42574 277 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 UQCRFS1P47985 274 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 HBA1P69905 142 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 MICBQ29980 383 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 TIMM50Q3ZCQ8 353 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 HTRA1Q92743 480 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 OXGR1Q96P68 337 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 TMED9Q9BVK6 235 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 PECRQ9BY49 303 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 BEX1Q9HBH7 125 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 PAK1IP1Q9NWT1 392 aaPredicted RBP5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 MLXQ9UH92 298 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 TIMM10BQ9Y5J6 103 aa5.07□□□□□ -1.6
CDC42BPA-209ENST00000448940 FAAHO00519 579 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 HSPB6O14558 160 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 DHFRP00374 187 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 CELA2AP08217 269 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 GLRA1P23415 457 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 GADD45AP24522 165 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 C21orf58P58505 322 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 RAC3P60763 192 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 ROR2Q01974 943 aaKnown RBP5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZNF628Q5EBL2 1059 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 C6orf183Q5T699 404 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 DCDC5Q6ZRR9 648 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 C8orf59Q8N0T1 100 aaPredicted RBP5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 OR8J3Q8NGG0 315 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 RPEQ96AT9 228 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 TMIGD2Q96BF3 282 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 R3HDM4Q96D70 268 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 ASCL3Q9NQ33 180 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 DOPEY1Q5JWR5 2465 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 MED13Q9UHV7 2174 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 LINC00854A0A1B0GVQ3 168 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 AGAP14A8MT82 685 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 ZNF780AO75290 641 aaPredicted RBP5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 CD3GP09693 182 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 ARNTP27540 789 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 MSX2P35548 267 aaPredicted RBP5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 CEBPGP53567 150 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 HERV-K104P61576 105 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 EIF4EBP2Q13542 120 aaPredicted RBP5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 OR1Q1Q15612 314 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 SSX6Q7RTT6 188 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 CCDC103Q8IW40 242 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 KDF1Q8NAX2 398 aaPredicted RBP5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 FAM71F1Q96KD3 344 aaPredicted RBP5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 RASL11BQ9BPW5 248 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 AIFM2Q9BRQ8 373 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 MCUBQ9NWR8 336 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 VSX1Q9NZR4 365 aaPredicted RBP5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 CEP295Q9C0D2 2601 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 PKD1L2Q7Z442 2459 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 FAM157AC9JC47 383 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 SDHDO14521 159 aa5.06□□□□□ -1.6
CDC42BPA-209ENST00000448940 ATP1B1P05026 303 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms