RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 BOKQ9UMX3 212 aaPredicted RBP9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 LINC01387J3KSC0 135 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 PDCD5O14737 125 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 ZIC3O60481 467 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 SLC19A2O60779 497 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 AQP8O94778 261 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 SPARCP09486 303 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 OR8G3PP0DMU2 310 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 TGM1P22735 817 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 TCEA1P23193 301 aaKnown RBP9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 PTBP1P26599 531 aaKnown RBP eCLIP9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 PTGS2P35354 604 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 CLRN1P58418 232 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 DEFA1P59665 94 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 DEFA3P59666 94 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 GPR85P60893 370 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 GABREP78334 506 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 ROM1Q03395 351 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 TRIM16LQ309B1 348 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 DCAF10Q5QP82 559 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 ZNF468Q5VIY5 522 aaPredicted RBP9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 HBMQ6B0K9 141 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 FDX2Q6P4F2 183 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 METAP1DQ6UB28 335 aaPredicted RBP9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 UNQ9370/PRO34162Q6UXP9 181 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 MDGA2Q7Z553 956 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 ZNF679Q8IYX0 411 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 CLEC1AQ8NC01 280 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 OR10H5Q8NGA6 315 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 OR5M1Q8NGP8 315 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 OR6X1Q8NH79 312 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 OR5AK2Q8NH90 309 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 NSMAFQ92636 917 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 COX4I2Q96KJ9 171 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 OR8B4Q96RC9 309 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 UTP23Q9BRU9 249 aaKnown RBP9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 ABCB9Q9NP78 766 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 LRFN1Q9P244 771 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 KLHL13Q9P2N7 655 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 B3GAT1Q9P2W7 334 aa9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 COA3Q9Y2R0 106 aaPredicted RBP9.45□□□□□ -0.9
VIPAS39-203ENST00000448935 PCNX2A6NKB5 2137 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 A0A1B0GVG6 124 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 ANKRD61A6NGH8 418 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 TMEM212A6NML5 194 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 ZNF726A6NNF4 738 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 ATXN7O15265 892 aaPredicted RBP9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 MAGEB4O15481 346 aaPredicted RBP9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 ZNF254O75437 659 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 UPK3AO75631 287 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 ABHD16AO95870 558 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 UCHL1P09936 223 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 OCM2P0CE71 109 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 OCMP0CE72 109 aaPredicted RBP9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 RAB3BP20337 219 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 ITGA3P26006 1051 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 SHC1P29353 583 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 PSMB10P40306 273 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 DNASE1L1P49184 302 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 P2RY4P51582 365 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 CCR9P51686 369 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 TCF15Q12870 199 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 EIF2B1Q14232 305 aaKnown RBP9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 POU4F3Q15319 338 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 TOMM20Q15388 145 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 DEGS2Q6QHC5 323 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 DCDC5Q6ZRR9 648 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 KRT77Q7Z794 578 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 GPAT4Q86UL3 456 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 GLB1L2Q8IW92 636 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 LAX1Q8IWV1 398 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 NOXO1Q8NFA2 376 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 SLC26A10Q8NG04 563 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 OR14L1PQ8NHC6 308 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 RELTQ969Z4 430 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 DIRAS2Q96HU8 199 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 TXNDC15Q96J42 360 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 ATF6BQ99941 703 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 FAM173AQ9BQD7 235 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 MRPL13Q9BYD1 178 aaKnown RBP9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 SLITRK2Q9H156 845 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 ZFP64Q9NPA5 681 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 TBCCD1Q9NVR7 557 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 MRPL22Q9NWU5 206 aaKnown RBP9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 MED29Q9NX70 200 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 QPCTLQ9NXS2 382 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 B4GALT7Q9UBV7 327 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 KCNG2Q9UJ96 466 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 KLHDC2Q9Y2U9 406 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 MSRB2Q9Y3D2 182 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 GPR179Q6PRD1 2367 aa9.44□□□□□ -0.9
VIPAS39-203ENST00000448935 DCDC2BA2VCK2 349 aa9.43□□□□□ -0.9
VIPAS39-203ENST00000448935 FABP12A6NFH5 140 aa9.43□□□□□ -0.9
VIPAS39-203ENST00000448935 G3V3Y1 287 aa9.43□□□□□ -0.9
VIPAS39-203ENST00000448935 MASP2O00187 686 aa9.43□□□□□ -0.9
VIPAS39-203ENST00000448935 TBX1O43435 398 aa9.43□□□□□ -0.9
VIPAS39-203ENST00000448935 TRAF3IP2O43734 574 aaPredicted RBP9.43□□□□□ -0.9
VIPAS39-203ENST00000448935 RPP14O95059 124 aaKnown RBP9.43□□□□□ -0.9
VIPAS39-203ENST00000448935 CSRP1P21291 193 aaKnown RBP9.43□□□□□ -0.9
VIPAS39-203ENST00000448935 NBL1P41271 181 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms