RNA–Protein interactions for RNA: ENST00000448530.5

VCP-203, Transcript of valosin containing protein, humanhuman

TSL 5

Gene VCP, Length 950 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-203ENST00000448530 NSMAFQ92636 917 aa16.93■□□□□ 0.3
VCP-203ENST00000448530 HDAC2Q92769 488 aaKnown RBP16.93■□□□□ 0.3
VCP-203ENST00000448530 MSI2Q96DH6 328 aaKnown RBP16.93■□□□□ 0.3
VCP-203ENST00000448530 HSH2DQ96JZ2 352 aa16.93■□□□□ 0.3
VCP-203ENST00000448530 ELAC2Q9BQ52 826 aaKnown RBP16.93■□□□□ 0.3
VCP-203ENST00000448530 ALG12Q9BV10 488 aa16.93■□□□□ 0.3
VCP-203ENST00000448530 OR51B6Q9H340 312 aa16.93■□□□□ 0.3
VCP-203ENST00000448530 CHODLQ9H9P2 273 aa16.93■□□□□ 0.3
VCP-203ENST00000448530 SNX13Q9Y5W8 968 aa16.93■□□□□ 0.3
VCP-203ENST00000448530 A6NIZ1 184 aa16.92■□□□□ 0.3
VCP-203ENST00000448530 J3KTA2 159 aa16.92■□□□□ 0.3
VCP-203ENST00000448530 SNAP29O95721 258 aa16.92■□□□□ 0.3
VCP-203ENST00000448530 TGFAP01135 160 aa16.92■□□□□ 0.3
VCP-203ENST00000448530 IGFBP1P08833 259 aaPredicted RBP16.92■□□□□ 0.3
VCP-203ENST00000448530 TCN1P20061 433 aaPredicted RBP16.92■□□□□ 0.3
VCP-203ENST00000448530 MAKP20794 623 aa16.92■□□□□ 0.3
VCP-203ENST00000448530 HNF1AP20823 631 aa16.92■□□□□ 0.3
VCP-203ENST00000448530 CDAP32320 146 aa16.92■□□□□ 0.3
VCP-203ENST00000448530 RAP1BP61224 184 aa16.92■□□□□ 0.3
VCP-203ENST00000448530 RAP1AP62834 184 aa16.92■□□□□ 0.3
VCP-203ENST00000448530 PRKCDQ05655 676 aa16.92■□□□□ 0.3
VCP-203ENST00000448530 FMODQ06828 376 aa16.92■□□□□ 0.3
VCP-203ENST00000448530 MAD2L1BPQ15013 274 aaPredicted RBP16.92■□□□□ 0.3
VCP-203ENST00000448530 THEM4Q5T1C6 240 aa16.92■□□□□ 0.3
VCP-203ENST00000448530 IGFN1Q86VF2 1251 aa16.92■□□□□ 0.3
VCP-203ENST00000448530 TREML1Q86YW5 311 aa16.92■□□□□ 0.3
VCP-203ENST00000448530 PAQR4Q8N4S7 273 aaPredicted RBP16.92■□□□□ 0.3
VCP-203ENST00000448530 ICA1LQ8NDH6 482 aa16.92■□□□□ 0.3
VCP-203ENST00000448530 C11orf40Q8WZ69 217 aa16.92■□□□□ 0.3
VCP-203ENST00000448530 BCL2L14Q9BZR8 327 aa16.92■□□□□ 0.3
VCP-203ENST00000448530 NDEL1Q9GZM8 345 aa16.92■□□□□ 0.3
VCP-203ENST00000448530 RPS6KA6Q9UK32 745 aa16.92■□□□□ 0.3
VCP-203ENST00000448530 COL6A5A8TX70 2615 aa16.92■□□□□ 0.3
VCP-203ENST00000448530 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.91■□□□□ 0.31e-6■■■■■ 32.5
VCP-203ENST00000448530 TRAV27A0A087WT01 109 aa16.91■□□□□ 0.3
VCP-203ENST00000448530 LRP5LA4QPB2 252 aa16.91■□□□□ 0.3
VCP-203ENST00000448530 LYNX1G3V0Z9 82 aa16.91■□□□□ 0.3
VCP-203ENST00000448530 ATP8B1O43520 1251 aa16.91■□□□□ 0.3
VCP-203ENST00000448530 GMNNO75496 209 aa16.91■□□□□ 0.3
VCP-203ENST00000448530 LYNX1P0DP58 116 aa16.91■□□□□ 0.3
VCP-203ENST00000448530 CCNOP22674 350 aa16.91■□□□□ 0.3
VCP-203ENST00000448530 APEX1P27695 318 aaKnown RBP16.91■□□□□ 0.3
VCP-203ENST00000448530 SLC9A3P48764 834 aa16.91■□□□□ 0.3
VCP-203ENST00000448530 SEC24CP53992 1094 aa16.91■□□□□ 0.3
VCP-203ENST00000448530 KLF3P57682 345 aaPredicted RBP16.91■□□□□ 0.3
VCP-203ENST00000448530 PABPC1L2AQ5JQF8 200 aa16.91■□□□□ 0.3
VCP-203ENST00000448530 C8orf82Q6P1X6 216 aaPredicted RBP16.91■□□□□ 0.3
VCP-203ENST00000448530 CXXC5Q7LFL8 322 aaKnown RBP16.91■□□□□ 0.3
VCP-203ENST00000448530 MEX3DQ86XN8 651 aaKnown RBP16.91■□□□□ 0.3
VCP-203ENST00000448530 ZNF519Q8TB69 540 aa16.91■□□□□ 0.3
VCP-203ENST00000448530 SYNPRQ8TBG9 265 aa16.91■□□□□ 0.3
VCP-203ENST00000448530 SNX33Q8WV41 574 aa16.91■□□□□ 0.3
VCP-203ENST00000448530 SNX18Q96RF0 628 aa16.91■□□□□ 0.3
VCP-203ENST00000448530 FAM107BQ9H098 131 aa16.91■□□□□ 0.3
VCP-203ENST00000448530 NSRP1Q9H0G5 558 aaKnown RBP16.91■□□□□ 0.3
VCP-203ENST00000448530 MAN2C1Q9NTJ4 1040 aa16.91■□□□□ 0.3
VCP-203ENST00000448530 MYEF2Q9P2K5 600 aaKnown RBP16.91■□□□□ 0.3
VCP-203ENST00000448530 FAM32AQ9Y421 112 aaKnown RBP16.91■□□□□ 0.3
VCP-203ENST00000448530 UGT2A1Q9Y4X1 527 aa16.91■□□□□ 0.3
VCP-203ENST00000448530 FFAR1O14842 300 aa16.9■□□□□ 0.3
VCP-203ENST00000448530 IGHMP01871 453 aa16.9■□□□□ 0.3
VCP-203ENST00000448530 MMP7P09237 267 aaPredicted RBP16.9■□□□□ 0.3
VCP-203ENST00000448530 TACSTD2P09758 323 aa16.9■□□□□ 0.3
VCP-203ENST00000448530 NCK1P16333 377 aa16.9■□□□□ 0.3
VCP-203ENST00000448530 RPL4P36578 427 aaKnown RBP16.9■□□□□ 0.3
VCP-203ENST00000448530 UCP2P55851 309 aa16.9■□□□□ 0.3
VCP-203ENST00000448530 PSME3P61289 254 aa16.9■□□□□ 0.3
VCP-203ENST00000448530 RIN1Q13671 783 aa16.9■□□□□ 0.3
VCP-203ENST00000448530 MOGQ16653 247 aa16.9■□□□□ 0.3
VCP-203ENST00000448530 TMEM154Q6P9G4 183 aa16.9■□□□□ 0.3
VCP-203ENST00000448530 SLC25A47Q6Q0C1 308 aa16.9■□□□□ 0.3
VCP-203ENST00000448530 UGT2A3Q6UWM9 527 aa16.9■□□□□ 0.3
VCP-203ENST00000448530 UNQ6126/PRO20091Q6UXV3 157 aa16.9■□□□□ 0.3
VCP-203ENST00000448530 MBOAT2Q6ZWT7 520 aa16.9■□□□□ 0.3
VCP-203ENST00000448530 OR13C2Q8NGS9 318 aa16.9■□□□□ 0.3
VCP-203ENST00000448530 RDH5Q92781 318 aa16.9■□□□□ 0.3
VCP-203ENST00000448530 HPS1Q92902 700 aa16.9■□□□□ 0.3
VCP-203ENST00000448530 NMD3Q96D46 503 aaKnown RBP16.9■□□□□ 0.3
VCP-203ENST00000448530 SLCO1C1Q9NYB5 712 aa16.9■□□□□ 0.3
VCP-203ENST00000448530 TAAR3PQ9P1P4 343 aa16.9■□□□□ 0.3
VCP-203ENST00000448530 EIF3KQ9UBQ5 218 aaKnown RBP16.9■□□□□ 0.3
VCP-203ENST00000448530 MXRA5Q9NR99 2828 aa16.9■□□□□ 0.3
VCP-203ENST00000448530 A0A087WUU8 490 aa16.89■□□□□ 0.29
VCP-203ENST00000448530 MT-ND5P03915 603 aa16.89■□□□□ 0.29
VCP-203ENST00000448530 NAT2P11245 290 aa16.89■□□□□ 0.29
VCP-203ENST00000448530 ZNF32P17041 273 aa16.89■□□□□ 0.29
VCP-203ENST00000448530 DRD4P21917 467 aa16.89■□□□□ 0.29
VCP-203ENST00000448530 FUT4P22083 530 aa16.89■□□□□ 0.29
VCP-203ENST00000448530 IGFBP5P24593 272 aa16.89■□□□□ 0.29
VCP-203ENST00000448530 STOMP27105 288 aa16.89■□□□□ 0.29
VCP-203ENST00000448530 GPR4P46093 362 aa16.89■□□□□ 0.29
VCP-203ENST00000448530 GDI2P50395 445 aaKnown RBP16.89■□□□□ 0.29
VCP-203ENST00000448530 ALKBH6Q3KRA9 238 aa16.89■□□□□ 0.29
VCP-203ENST00000448530 FAM27BQ5VT28 67 aa16.89■□□□□ 0.29
VCP-203ENST00000448530 ALDH16A1Q8IZ83 802 aa16.89■□□□□ 0.29
VCP-203ENST00000448530 ARIH2OSQ8N7S6 290 aa16.89■□□□□ 0.29
VCP-203ENST00000448530 NABP1Q96AH0 204 aa16.89■□□□□ 0.29
VCP-203ENST00000448530 TSPAN32Q96QS1 320 aa16.89■□□□□ 0.29
VCP-203ENST00000448530 ANKRD19PQ9H560 264 aa16.89■□□□□ 0.29
VCP-203ENST00000448530 SPAG4Q9NPE6 437 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms