RNA–Protein interactions for RNA: ENST00000448428.1

PRPF40A-203, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 5

Gene PRPF40A, Length 490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-203ENST00000448428 Q96M85 177 aa11□□□□□ -0.65
PRPF40A-203ENST00000448428 DOK1Q99704 481 aa11□□□□□ -0.65
PRPF40A-203ENST00000448428 GPA33Q99795 319 aa11□□□□□ -0.65
PRPF40A-203ENST00000448428 PLK3Q9H4B4 646 aa11□□□□□ -0.65
PRPF40A-203ENST00000448428 GRHPRQ9UBQ7 328 aa11□□□□□ -0.65
PRPF40A-203ENST00000448428 SPEF1Q9Y4P9 236 aa11□□□□□ -0.65
PRPF40A-203ENST00000448428 UNC119BA6NIH7 251 aa10.99□□□□□ -0.65
PRPF40A-203ENST00000448428 H7C1C5 153 aa10.99□□□□□ -0.65
PRPF40A-203ENST00000448428 GPRIN2O60269 458 aa10.99□□□□□ -0.65
PRPF40A-203ENST00000448428 NDUFB2O95178 105 aa10.99□□□□□ -0.65
PRPF40A-203ENST00000448428 FABP3P05413 133 aa10.99□□□□□ -0.65
PRPF40A-203ENST00000448428 HEXAP06865 529 aa10.99□□□□□ -0.65
PRPF40A-203ENST00000448428 MMP7P09237 267 aaPredicted RBP10.99□□□□□ -0.65
PRPF40A-203ENST00000448428 NR2C1P13056 603 aa10.99□□□□□ -0.65
PRPF40A-203ENST00000448428 CCL2P13500 99 aa10.99□□□□□ -0.65
PRPF40A-203ENST00000448428 ATP6V1B2P21281 511 aa10.99□□□□□ -0.65
PRPF40A-203ENST00000448428 GLRXP35754 106 aa10.99□□□□□ -0.65
PRPF40A-203ENST00000448428 FXYD6P3P58550 94 aa10.99□□□□□ -0.65
PRPF40A-203ENST00000448428 LCN6P62502 163 aa10.99□□□□□ -0.65
PRPF40A-203ENST00000448428 MS4A2Q01362 244 aa10.99□□□□□ -0.65
PRPF40A-203ENST00000448428 FAM27BQ5VT28 67 aa10.99□□□□□ -0.65
PRPF40A-203ENST00000448428 THSD4Q6ZMP0 1018 aa10.99□□□□□ -0.65
PRPF40A-203ENST00000448428 ZER1Q7Z7L7 766 aa10.99□□□□□ -0.65
PRPF40A-203ENST00000448428 ZDHHC21Q8IVQ6 265 aa10.99□□□□□ -0.65
PRPF40A-203ENST00000448428 ARHGAP24Q8N264 748 aa10.99□□□□□ -0.65
PRPF40A-203ENST00000448428 SVOPLQ8N434 492 aa10.99□□□□□ -0.65
PRPF40A-203ENST00000448428 PAQR4Q8N4S7 273 aaPredicted RBP10.99□□□□□ -0.65
PRPF40A-203ENST00000448428 ZNF525Q8N782 197 aa10.99□□□□□ -0.65
PRPF40A-203ENST00000448428 SLC30A7Q8NEW0 376 aa10.99□□□□□ -0.65
PRPF40A-203ENST00000448428 RSRC1Q96IZ7 334 aaKnown RBP10.99□□□□□ -0.65
PRPF40A-203ENST00000448428 SORCS2Q96PQ0 1159 aa10.99□□□□□ -0.65
PRPF40A-203ENST00000448428 VRK1Q99986 396 aaPredicted RBP10.99□□□□□ -0.65
PRPF40A-203ENST00000448428 RHNO1Q9BSD3 238 aa10.99□□□□□ -0.65
PRPF40A-203ENST00000448428 TAS2R1Q9NYW7 299 aa10.99□□□□□ -0.65
PRPF40A-203ENST00000448428 IL20RAQ9UHF4 553 aa10.99□□□□□ -0.65
PRPF40A-203ENST00000448428 AURKCQ9UQB9 309 aa10.99□□□□□ -0.65
PRPF40A-203ENST00000448428 CMAHPQ9Y471 501 aa10.99□□□□□ -0.65
PRPF40A-203ENST00000448428 IGHV4-30-2A0A087WSY4 118 aa10.98□□□□□ -0.65
PRPF40A-203ENST00000448428 TCRBV5S2A0A599 114 aa10.98□□□□□ -0.65
PRPF40A-203ENST00000448428 SLC22A23A1A5C7 686 aa10.98□□□□□ -0.65
PRPF40A-203ENST00000448428 IGFBP1P08833 259 aaPredicted RBP10.98□□□□□ -0.65
PRPF40A-203ENST00000448428 ZNF32P17041 273 aa10.98□□□□□ -0.65
PRPF40A-203ENST00000448428 APEX1P27695 318 aaKnown RBP10.98□□□□□ -0.65
PRPF40A-203ENST00000448428 LAP3P28838 519 aa10.98□□□□□ -0.65
PRPF40A-203ENST00000448428 RRM2P31350 389 aa10.98□□□□□ -0.65
PRPF40A-203ENST00000448428 DSCR9P59020 149 aa10.98□□□□□ -0.65
PRPF40A-203ENST00000448428 GALK2Q01415 458 aa10.98□□□□□ -0.65
PRPF40A-203ENST00000448428 PLP2Q04941 152 aa10.98□□□□□ -0.65
PRPF40A-203ENST00000448428 TRIM25Q14258 630 aaKnown RBP10.98□□□□□ -0.65
PRPF40A-203ENST00000448428 MESTQ5EB52 335 aa10.98□□□□□ -0.65
PRPF40A-203ENST00000448428 PABPC1L2AQ5JQF8 200 aa10.98□□□□□ -0.65
PRPF40A-203ENST00000448428 CLEC2AQ6UVW9 174 aa10.98□□□□□ -0.65
PRPF40A-203ENST00000448428 FOXL2NBQ6ZUU3 175 aa10.98□□□□□ -0.65
PRPF40A-203ENST00000448428 DHFR2Q86XF0 187 aa10.98□□□□□ -0.65
PRPF40A-203ENST00000448428 ZCCHC24Q8N2G6 241 aaKnown RBP10.98□□□□□ -0.65
PRPF40A-203ENST00000448428 CPEB3Q8NE35 698 aaKnown RBP10.98□□□□□ -0.65
PRPF40A-203ENST00000448428 BCAS4Q8TDM0 211 aa10.98□□□□□ -0.65
PRPF40A-203ENST00000448428 RASD2Q96D21 266 aa10.98□□□□□ -0.65
PRPF40A-203ENST00000448428 ZNF570Q96NI8 536 aa10.98□□□□□ -0.65
PRPF40A-203ENST00000448428 KCNN2Q9H2S1 579 aa10.98□□□□□ -0.65
PRPF40A-203ENST00000448428 KRCC1Q9NPI7 259 aaPredicted RBP10.98□□□□□ -0.65
PRPF40A-203ENST00000448428 NRIP3Q9NQ35 241 aa10.98□□□□□ -0.65
PRPF40A-203ENST00000448428 IER3IP1Q9Y5U9 82 aa10.98□□□□□ -0.65
PRPF40A-203ENST00000448428 IQCMA0A1B0GVH7 501 aa10.97□□□□□ -0.65
PRPF40A-203ENST00000448428 A0A1W2PPL8 197 aa10.97□□□□□ -0.65
PRPF40A-203ENST00000448428 PRSS37A4D1T9 235 aa10.97□□□□□ -0.65
PRPF40A-203ENST00000448428 XKRYO14609 159 aa10.97□□□□□ -0.65
PRPF40A-203ENST00000448428 AHCYL1O43865 530 aa10.97□□□□□ -0.65
PRPF40A-203ENST00000448428 OR10H3O60404 316 aa10.97□□□□□ -0.65
PRPF40A-203ENST00000448428 PTHP01270 115 aa10.97□□□□□ -0.65
PRPF40A-203ENST00000448428 SCG5P05408 212 aa10.97□□□□□ -0.65
PRPF40A-203ENST00000448428 CST2P09228 141 aa10.97□□□□□ -0.65
PRPF40A-203ENST00000448428 HOXB4P17483 251 aaPredicted RBP10.97□□□□□ -0.65
PRPF40A-203ENST00000448428 PPOXP50336 477 aa10.97□□□□□ -0.65
PRPF40A-203ENST00000448428 HMGA2P52926 109 aa10.97□□□□□ -0.65
PRPF40A-203ENST00000448428 TBC1D28Q2M2D7 210 aa10.97□□□□□ -0.65
PRPF40A-203ENST00000448428 MTX3Q5HYI7 312 aa10.97□□□□□ -0.65
PRPF40A-203ENST00000448428 GPR139Q6DWJ6 353 aa10.97□□□□□ -0.65
PRPF40A-203ENST00000448428 LCN8Q6JVE9 175 aa10.97□□□□□ -0.65
PRPF40A-203ENST00000448428 SMARCD3Q6STE5 483 aa10.97□□□□□ -0.65
PRPF40A-203ENST00000448428 DPY19L2P2Q6ZN68 376 aa10.97□□□□□ -0.65
PRPF40A-203ENST00000448428 TRPM8Q7Z2W7 1104 aa10.97□□□□□ -0.65
PRPF40A-203ENST00000448428 LRP11Q86VZ4 500 aa10.97□□□□□ -0.65
PRPF40A-203ENST00000448428 OR1J2Q8NGS2 313 aa10.97□□□□□ -0.65
PRPF40A-203ENST00000448428 AKR7LQ8NHP1 331 aa10.97□□□□□ -0.65
PRPF40A-203ENST00000448428 FAM168AQ92567 244 aa10.97□□□□□ -0.65
PRPF40A-203ENST00000448428 MRPL24Q96A35 216 aaKnown RBP10.97□□□□□ -0.65
PRPF40A-203ENST00000448428 CLPTM1LQ96KA5 538 aa10.97□□□□□ -0.65
PRPF40A-203ENST00000448428 GPX7Q96SL4 187 aaPredicted RBP10.97□□□□□ -0.65
PRPF40A-203ENST00000448428 MRPL37Q9BZE1 423 aaKnown RBP10.97□□□□□ -0.65
PRPF40A-203ENST00000448428 NDEL1Q9GZM8 345 aa10.97□□□□□ -0.65
PRPF40A-203ENST00000448428 RAB1BQ9H0U4 201 aa10.97□□□□□ -0.65
PRPF40A-203ENST00000448428 C1orf21Q9H246 121 aa10.97□□□□□ -0.65
PRPF40A-203ENST00000448428 MUC13Q9H3R2 512 aa10.97□□□□□ -0.65
PRPF40A-203ENST00000448428 C1orf198Q9H425 327 aa10.97□□□□□ -0.65
PRPF40A-203ENST00000448428 CDH20Q9HBT6 801 aa10.97□□□□□ -0.65
PRPF40A-203ENST00000448428 CCNB1IP1Q9NPC3 277 aa10.97□□□□□ -0.65
PRPF40A-203ENST00000448428 SLC7A8Q9UHI5 535 aa10.97□□□□□ -0.65
PRPF40A-203ENST00000448428 FBXO9Q9UK97 447 aaPredicted RBP10.97□□□□□ -0.65
PRPF40A-203ENST00000448428 TMCC3Q9ULS5 477 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms