RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 RABIFP47224 123 aa17.23■□□□□ 0.35
SDCBP-204ENST00000447182 MEP1BQ16820 701 aa17.23■□□□□ 0.35
SDCBP-204ENST00000447182 ZNF679Q8IYX0 411 aa17.23■□□□□ 0.35
SDCBP-204ENST00000447182 RNF128Q8TEB7 428 aa17.23■□□□□ 0.35
SDCBP-204ENST00000447182 ATG5Q9H1Y0 275 aa17.23■□□□□ 0.35
SDCBP-204ENST00000447182 SCPEP1Q9HB40 452 aa17.23■□□□□ 0.35
SDCBP-204ENST00000447182 GMEB2Q9UKD1 530 aa17.23■□□□□ 0.35
SDCBP-204ENST00000447182 MEIS3P1A6NDR6 274 aa17.23■□□□□ 0.35
SDCBP-204ENST00000447182 H3BSH0 61 aa17.23■□□□□ 0.35
SDCBP-204ENST00000447182 UTS2O95399 124 aa17.23■□□□□ 0.35
SDCBP-204ENST00000447182 CD8AP01732 235 aa17.23■□□□□ 0.35
SDCBP-204ENST00000447182 OR4E1P0C645 316 aa17.23■□□□□ 0.35
SDCBP-204ENST00000447182 TPMTP51580 245 aa17.23■□□□□ 0.35
SDCBP-204ENST00000447182 TFF2Q03403 129 aa17.23■□□□□ 0.35
SDCBP-204ENST00000447182 SERTAD2Q14140 314 aa17.23■□□□□ 0.35
SDCBP-204ENST00000447182 LY6G6FQ5SQ64 297 aa17.23■□□□□ 0.35
SDCBP-204ENST00000447182 CLVS2Q5SYC1 327 aa17.23■□□□□ 0.35
SDCBP-204ENST00000447182 ARHGAP40Q5TG30 622 aa17.23■□□□□ 0.35
SDCBP-204ENST00000447182 C12orf45Q8N5I9 185 aaPredicted RBP17.23■□□□□ 0.35
SDCBP-204ENST00000447182 OR1J4Q8NGS1 313 aa17.23■□□□□ 0.35
SDCBP-204ENST00000447182 OR8S1Q8NH09 359 aa17.23■□□□□ 0.35
SDCBP-204ENST00000447182 DUSP19Q8WTR2 217 aa17.23■□□□□ 0.35
SDCBP-204ENST00000447182 DVL3Q92997 716 aaPredicted RBP17.23■□□□□ 0.35
SDCBP-204ENST00000447182 SEH1LQ96EE3 360 aa17.23■□□□□ 0.35
SDCBP-204ENST00000447182 KCNK15Q9H427 330 aa17.23■□□□□ 0.35
SDCBP-204ENST00000447182 TRAV14DV4A0A0A6YYC5 116 aa17.22■□□□□ 0.35
SDCBP-204ENST00000447182 TCRBV16S1A1N1A0A5B0 115 aa17.22■□□□□ 0.35
SDCBP-204ENST00000447182 TMEM82A0PJX8 343 aa17.22■□□□□ 0.35
SDCBP-204ENST00000447182 BGLAPP02818 100 aa17.22■□□□□ 0.35
SDCBP-204ENST00000447182 MGMTP16455 207 aa17.22■□□□□ 0.35
SDCBP-204ENST00000447182 AGTR1P30556 359 aa17.22■□□□□ 0.35
SDCBP-204ENST00000447182 PPICP45877 212 aa17.22■□□□□ 0.35
SDCBP-204ENST00000447182 ROM1Q03395 351 aa17.22■□□□□ 0.35
SDCBP-204ENST00000447182 BIKQ13323 160 aa17.22■□□□□ 0.35
SDCBP-204ENST00000447182 KCNAB1Q14722 419 aa17.22■□□□□ 0.35
SDCBP-204ENST00000447182 STPG2Q8N412 459 aa17.22■□□□□ 0.35
SDCBP-204ENST00000447182 ZNF563Q8TA94 476 aa17.22■□□□□ 0.35
SDCBP-204ENST00000447182 ATOH1Q92858 354 aaPredicted RBP17.22■□□□□ 0.35
SDCBP-204ENST00000447182 LAT2Q9GZY6 243 aa17.22■□□□□ 0.35
SDCBP-204ENST00000447182 SLCO5A1Q9H2Y9 848 aa17.22■□□□□ 0.35
SDCBP-204ENST00000447182 ZNF107Q9UII5 783 aaPredicted RBP17.22■□□□□ 0.35
SDCBP-204ENST00000447182 GPR160Q9UJ42 338 aa17.22■□□□□ 0.35
SDCBP-204ENST00000447182 CHURC1-FNTBB4DL54 471 aa17.21■□□□□ 0.35
SDCBP-204ENST00000447182 RAB3DO95716 219 aa17.21■□□□□ 0.35
SDCBP-204ENST00000447182 UBBP0CG47 229 aa17.21■□□□□ 0.35
SDCBP-204ENST00000447182 UBCP0CG48 685 aaKnown RBP17.21■□□□□ 0.35
SDCBP-204ENST00000447182 SLC6A8P48029 635 aa17.21■□□□□ 0.35
SDCBP-204ENST00000447182 CENPAP49450 140 aa17.21■□□□□ 0.35
SDCBP-204ENST00000447182 RPS27AP62979 156 aaKnown RBP17.21■□□□□ 0.35
SDCBP-204ENST00000447182 UBA52P62987 128 aaKnown RBP17.21■□□□□ 0.35
SDCBP-204ENST00000447182 SRSF4Q08170 494 aaKnown RBP17.21■□□□□ 0.35
SDCBP-204ENST00000447182 GLT8D1Q68CQ7 371 aa17.21■□□□□ 0.35
SDCBP-204ENST00000447182 TMEM225Q6GV28 225 aa17.21■□□□□ 0.35
SDCBP-204ENST00000447182 TMEM205Q6UW68 189 aa17.21■□□□□ 0.35
SDCBP-204ENST00000447182 MS4A7Q9GZW8 240 aaPredicted RBP17.21■□□□□ 0.35
SDCBP-204ENST00000447182 DNTTIP1Q9H147 329 aa17.21■□□□□ 0.35
SDCBP-204ENST00000447182 IGFLR1Q9H665 355 aa17.21■□□□□ 0.35
SDCBP-204ENST00000447182 B9D1Q9UPM9 204 aa17.21■□□□□ 0.35
SDCBP-204ENST00000447182 A0A0D9SG52 128 aa17.21■□□□□ 0.35
SDCBP-204ENST00000447182 A0A1B0GW55 424 aa17.21■□□□□ 0.35
SDCBP-204ENST00000447182 XKRYO14609 159 aa17.21■□□□□ 0.35
SDCBP-204ENST00000447182 TOR1AO14656 332 aa17.21■□□□□ 0.35
SDCBP-204ENST00000447182 PRKNO60260 465 aaPredicted RBP17.21■□□□□ 0.35
SDCBP-204ENST00000447182 SPDEFO95238 335 aa17.21■□□□□ 0.35
SDCBP-204ENST00000447182 WDPCPO95876 746 aa17.21■□□□□ 0.35
SDCBP-204ENST00000447182 RLN2P04090 185 aa17.21■□□□□ 0.35
SDCBP-204ENST00000447182 FBXO45P0C2W1 286 aa17.21■□□□□ 0.35
SDCBP-204ENST00000447182 DUX4L2P0CJ85 424 aa17.21■□□□□ 0.35
SDCBP-204ENST00000447182 DUX4L3P0CJ86 424 aa17.21■□□□□ 0.35
SDCBP-204ENST00000447182 DUX4L4P0CJ87 422 aa17.21■□□□□ 0.35
SDCBP-204ENST00000447182 DUX4L5P0CJ88 424 aa17.21■□□□□ 0.35
SDCBP-204ENST00000447182 DUX4L6P0CJ89 424 aa17.21■□□□□ 0.35
SDCBP-204ENST00000447182 DUX4L7P0CJ90 424 aa17.21■□□□□ 0.35
SDCBP-204ENST00000447182 MELKQ14680 651 aa17.21■□□□□ 0.35
SDCBP-204ENST00000447182 TMEM31Q5JXX7 168 aa17.21■□□□□ 0.35
SDCBP-204ENST00000447182 SLC18B1Q6NT16 456 aa17.21■□□□□ 0.35
SDCBP-204ENST00000447182 OR52H1Q8NGJ2 320 aa17.21■□□□□ 0.35
SDCBP-204ENST00000447182 ELF4Q99607 663 aaPredicted RBP17.21■□□□□ 0.35
SDCBP-204ENST00000447182 MTIF3Q9H2K0 278 aaKnown RBP17.21■□□□□ 0.35
SDCBP-204ENST00000447182 CERS4Q9HA82 394 aa17.21■□□□□ 0.35
SDCBP-204ENST00000447182 DUX4Q9UBX2 424 aa17.21■□□□□ 0.35
SDCBP-204ENST00000447182 FBXL2Q9UKC9 423 aa17.21■□□□□ 0.35
SDCBP-204ENST00000447182 DHDHQ9UQ10 334 aa17.21■□□□□ 0.35
SDCBP-204ENST00000447182 SLC22A13Q9Y226 551 aa17.21■□□□□ 0.35
SDCBP-204ENST00000447182 C10orf142B7Z368 130 aa17.2■□□□□ 0.34
SDCBP-204ENST00000447182 DOK2O60496 412 aa17.2■□□□□ 0.34
SDCBP-204ENST00000447182 TSPAN9O75954 239 aa17.2■□□□□ 0.34
SDCBP-204ENST00000447182 PNPP00491 289 aa17.2■□□□□ 0.34
SDCBP-204ENST00000447182 IGFBP3P17936 291 aaPredicted RBP17.2■□□□□ 0.34
SDCBP-204ENST00000447182 FSTP19883 344 aa17.2■□□□□ 0.34
SDCBP-204ENST00000447182 CTHP32929 405 aa17.2■□□□□ 0.34
SDCBP-204ENST00000447182 SLC37A1P57057 533 aa17.2■□□□□ 0.34
SDCBP-204ENST00000447182 FGL1Q08830 312 aa17.2■□□□□ 0.34
SDCBP-204ENST00000447182 PLPP7Q8NBV4 271 aa17.2■□□□□ 0.34
SDCBP-204ENST00000447182 STK35Q8TDR2 534 aa17.2■□□□□ 0.34
SDCBP-204ENST00000447182 ASB5Q8WWX0 329 aa17.2■□□□□ 0.34
SDCBP-204ENST00000447182 MRPS24Q96EL2 167 aaKnown RBP17.2■□□□□ 0.34
SDCBP-204ENST00000447182 SLC41A2Q96JW4 573 aa17.2■□□□□ 0.34
SDCBP-204ENST00000447182 ZNF285Q96NJ3 590 aa17.2■□□□□ 0.34
SDCBP-204ENST00000447182 CDCA3Q99618 268 aaPredicted RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms