RNA–Protein interactions for RNA: ENST00000447024.5

SMARCE1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-206ENST00000447024 COMTD1Q86VU5 262 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 EPHX4Q8IUS5 362 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 MICU2Q8IYU8 434 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 OR5J2Q8NH18 312 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 ADAMTS16Q8TE57 1224 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 TMEM171Q8WVE6 324 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 LIPHQ8WWY8 451 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 IGFBPL1Q8WX77 278 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 NRGNQ92686 78 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 TAMM41Q96BW9 452 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 SLC25A36Q96CQ1 311 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 RCN3Q96D15 328 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 CCL19Q99731 98 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 MYLK2Q9H1R3 596 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 LIME1Q9H400 295 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 DENND2DQ9H6A0 471 aaPredicted RBP6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 B3GAT2Q9NPZ5 323 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 SLC17A5Q9NRA2 495 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 ZNF701Q9NV72 531 aaPredicted RBP6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 B3GAT1Q9P2W7 334 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 STX18Q9P2W9 335 aaKnown RBP6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 FBXO9Q9UK97 447 aaPredicted RBP6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 SLC25A15Q9Y619 301 aa6.77□□□□□ -1.33
SMARCE1-206ENST00000447024 ARPC4-TTLL3A0A0A6YYG9 625 aa6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 NPIPB13A6NJU9 1138 aa6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 FAM171A2A8MVW0 826 aa6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 CENPBD1B2RD01 187 aa6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 NPIPB4C9JG80 1138 aa6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 M0R3H8 397 aa6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 PLPP3O14495 311 aa6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 RAD51DO75771 328 aa6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 DCTN3O75935 186 aa6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 BGLAPP02818 100 aa6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 OPN1SWP03999 348 aa6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 HIST1H2ABP04908 130 aa6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 NQO1P15559 274 aaKnown RBP6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 MNAT1P51948 309 aa6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 CRYBA2P53672 197 aa6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 SELENOWP63302 87 aa6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 BSPH1Q075Z2 132 aa6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 ST3GAL3Q11203 375 aa6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 PMS2P3Q13401 168 aa6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 ANKDD1AQ495B1 522 aa6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 ZNF672Q499Z4 452 aaPredicted RBP6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 CYBRD1Q53TN4 286 aa6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 HMBOX1Q6NT76 420 aa6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 C8orf82Q6P1X6 216 aaPredicted RBP6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 ANKRD16Q6P6B7 361 aa6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 HIST3H2AQ7L7L0 130 aa6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 CARM1Q86X55 608 aa6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 P3H2Q8IVL5 708 aa6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 UEVLDQ8IX04 471 aa6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 SLC15A3Q8IY34 581 aa6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 IL17RDQ8NFM7 739 aa6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 TBC1D15Q8TC07 691 aa6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 AKAP1Q92667 903 aaKnown RBP eCLIP6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 HIST1H2ACQ93077 130 aa6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 TRMT61AQ96FX7 289 aaKnown RBP6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 ADAD1Q96M93 576 aaKnown RBP6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 ZNF385AQ96PM9 386 aaKnown RBP6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 ELAC2Q9BQ52 826 aaKnown RBP6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 UBTD1Q9HAC8 227 aa6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 NANSQ9NR45 359 aa6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 NDE1Q9NXR1 346 aa6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 ARMCX1Q9P291 453 aa6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 ZNF229Q9UJW7 825 aa6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 SH3GLB1Q9Y371 365 aa6.76□□□□□ -1.33
SMARCE1-206ENST00000447024 DPRXA6NFQ7 191 aa6.75□□□□□ -1.33
SMARCE1-206ENST00000447024 CPSF4LA6NMK7 179 aaKnown RBP6.75□□□□□ -1.33
SMARCE1-206ENST00000447024 MS4A18H0YCH9 400 aa6.75□□□□□ -1.33
SMARCE1-206ENST00000447024 TRAF3IP2O43734 574 aaPredicted RBP6.75□□□□□ -1.33
SMARCE1-206ENST00000447024 GMNNO75496 209 aa6.75□□□□□ -1.33
SMARCE1-206ENST00000447024 OR6A2O95222 327 aa6.75□□□□□ -1.33
SMARCE1-206ENST00000447024 LYPD3O95274 346 aa6.75□□□□□ -1.33
SMARCE1-206ENST00000447024 IGHV3-9P01782 118 aa6.75□□□□□ -1.33
SMARCE1-206ENST00000447024 MT-ND1P03886 318 aa6.75□□□□□ -1.33
SMARCE1-206ENST00000447024 NR2C1P13056 603 aa6.75□□□□□ -1.33
SMARCE1-206ENST00000447024 CD99P14209 185 aa6.75□□□□□ -1.33
SMARCE1-206ENST00000447024 DRD4P21917 467 aa6.75□□□□□ -1.33
SMARCE1-206ENST00000447024 EDNRAP25101 427 aa6.75□□□□□ -1.33
SMARCE1-206ENST00000447024 CLDN17P56750 224 aa6.75□□□□□ -1.33
SMARCE1-206ENST00000447024 UBE2NP61088 152 aaKnown RBP6.75□□□□□ -1.33
SMARCE1-206ENST00000447024 RPS4XP62701 263 aaKnown RBP6.75□□□□□ -1.33
SMARCE1-206ENST00000447024 NKX6-1P78426 367 aaPredicted RBP6.75□□□□□ -1.33
SMARCE1-206ENST00000447024 LIPEQ05469 1076 aa6.75□□□□□ -1.33
SMARCE1-206ENST00000447024 TAF11Q15544 211 aa6.75□□□□□ -1.33
SMARCE1-206ENST00000447024 TSC22D1Q15714 1073 aa6.75□□□□□ -1.33
SMARCE1-206ENST00000447024 ZNF74Q16587 644 aa6.75□□□□□ -1.33
SMARCE1-206ENST00000447024 MS4A18Q3C1V0 323 aa6.75□□□□□ -1.33
SMARCE1-206ENST00000447024 ZNF544Q6NX49 715 aa6.75□□□□□ -1.33
SMARCE1-206ENST00000447024 NIPAL3Q6P499 406 aa6.75□□□□□ -1.33
SMARCE1-206ENST00000447024 NHLRC1Q6VVB1 395 aa6.75□□□□□ -1.33
SMARCE1-206ENST00000447024 DPPA2Q7Z7J5 298 aa6.75□□□□□ -1.33
SMARCE1-206ENST00000447024 DTX2Q86UW9 622 aa6.75□□□□□ -1.33
SMARCE1-206ENST00000447024 RNF113BQ8IZP6 322 aaKnown RBP6.75□□□□□ -1.33
SMARCE1-206ENST00000447024 TMEM123Q8N131 208 aa6.75□□□□□ -1.33
SMARCE1-206ENST00000447024 GPR137CQ8N3F9 429 aa6.75□□□□□ -1.33
SMARCE1-206ENST00000447024 C10orf53Q8N6V4 93 aa6.75□□□□□ -1.33
SMARCE1-206ENST00000447024 WDR31Q8NA23 367 aa6.75□□□□□ -1.33
SMARCE1-206ENST00000447024 OR6X1Q8NH79 312 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms