RNA–Protein interactions for RNA: ENST00000445265.6

TCOF1-206, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,825 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-206ENST00000445265 HAO2Q9NYQ3 351 aa15.17■□□□□ 0.02
TCOF1-206ENST00000445265 PCM1Q15154 2024 aa15.16■□□□□ 0.02
TCOF1-206ENST00000445265 OPN1LWP04000 364 aa15.16■□□□□ 0.02
TCOF1-206ENST00000445265 FAM57BQ71RH2 274 aa15.16■□□□□ 0.02
TCOF1-206ENST00000445265 RNF32Q9H0A6 362 aa15.16■□□□□ 0.02
TCOF1-206ENST00000445265 ALKBH4Q9NXW9 302 aa15.16■□□□□ 0.02
TCOF1-206ENST00000445265 RFXAPO00287 272 aa15.16■□□□□ 0.02
TCOF1-206ENST00000445265 STK17BO94768 372 aa15.16■□□□□ 0.02
TCOF1-206ENST00000445265 SNAPINO95295 136 aa15.16■□□□□ 0.02
TCOF1-206ENST00000445265 THBS2P35442 1172 aa15.16■□□□□ 0.02
TCOF1-206ENST00000445265 P2RX3P56373 397 aa15.16■□□□□ 0.02
TCOF1-206ENST00000445265 PMPCAQ10713 525 aa15.16■□□□□ 0.02
TCOF1-206ENST00000445265 SLC9A3R2Q15599 337 aa15.16■□□□□ 0.02
TCOF1-206ENST00000445265 TEX19Q8NA77 164 aa15.16■□□□□ 0.02
TCOF1-206ENST00000445265 C17orf47Q8NEP4 570 aa15.16■□□□□ 0.02
TCOF1-206ENST00000445265 OR4N2Q8NGD1 307 aa15.16■□□□□ 0.02
TCOF1-206ENST00000445265 ORAI1Q96D31 301 aa15.16■□□□□ 0.02
TCOF1-206ENST00000445265 SPIN2AQ99865 258 aa15.16■□□□□ 0.02
TCOF1-206ENST00000445265 SPIN2BQ9BPZ2 258 aa15.16■□□□□ 0.02
TCOF1-206ENST00000445265 DSPPQ9NZW4 1301 aa15.16■□□□□ 0.02
TCOF1-206ENST00000445265 LOC107986453A0A1B0GWG9 222 aa15.16■□□□□ 0.02
TCOF1-206ENST00000445265 NUDT21O43809 227 aaKnown RBP15.16■□□□□ 0.02
TCOF1-206ENST00000445265 FADS1O60427 444 aa15.16■□□□□ 0.02
TCOF1-206ENST00000445265 MOSPD3O75425 235 aa15.16■□□□□ 0.02
TCOF1-206ENST00000445265 OR8U9P0C7N5 309 aa15.16■□□□□ 0.02
TCOF1-206ENST00000445265 SLC25A1P53007 311 aa15.16■□□□□ 0.02
TCOF1-206ENST00000445265 PRICKLE4Q2TBC4 344 aa15.16■□□□□ 0.02
TCOF1-206ENST00000445265 UNKLQ9H9P5 680 aaKnown RBP15.16■□□□□ 0.02
TCOF1-206ENST00000445265 RGS11O94810 467 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 CAPZBP47756 277 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 RGS19P49795 217 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 SLC26A5P58743 744 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 MALLQ13021 153 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 FIP1L1Q6UN15 594 aaKnown RBP15.15■□□□□ 0.02
TCOF1-206ENST00000445265 PGAP1Q75T13 922 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 FAM71CQ8NEG0 241 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 ABHD1Q96SE0 405 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 DNAJB12Q9NXW2 375 aaKnown RBP15.15■□□□□ 0.02
TCOF1-206ENST00000445265 TAS2R4Q9NYW5 299 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 B4GALT7Q9UBV7 327 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 TRIM64BA6NI03 449 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 SULT1C2O00338 296 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 XRCC3O43542 346 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 IL33O95760 270 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 IL5P05113 134 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 HOXC4P09017 264 aaPredicted RBP15.15■□□□□ 0.02
TCOF1-206ENST00000445265 CD27P26842 260 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 CD79BP40259 229 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 SSBP1Q04837 148 aaKnown RBP15.15■□□□□ 0.02
TCOF1-206ENST00000445265 SLC17A1Q14916 467 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 CNN3Q15417 329 aaKnown RBP15.15■□□□□ 0.02
TCOF1-206ENST00000445265 SMAD2Q15796 467 aaKnown RBP15.15■□□□□ 0.02
TCOF1-206ENST00000445265 FAAP20Q6NZ36 180 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 OR14L1PQ8NHC6 308 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 ANGPTL6Q8NI99 470 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 FGF14Q92915 247 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 GPA33Q99795 319 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 NXF5Q9H1B4 397 aaKnown RBP15.15■□□□□ 0.02
TCOF1-206ENST00000445265 A0A1B0GX78 115 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 POU2F2P09086 479 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 MSL3P1P0C860 447 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 FXYD4P59646 89 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 C14orf28Q4W4Y0 310 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 OPN5Q6U736 354 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 OR2AK2Q8NG84 335 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 MVB12AQ96EY5 273 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 A0A0A6YYH2 397 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 PRSS37A4D1T9 235 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 A6NJ64 397 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 IFNA5P01569 189 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 HOXB5P09067 269 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 SERPINA2P20848 420 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 C2orf76Q3KRA6 126 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 TMEM176BQ3YBM2 270 aaPredicted RBP15.15■□□□□ 0.02
TCOF1-206ENST00000445265 DMKNQ6E0U4 476 aaPredicted RBP15.15■□□□□ 0.02
TCOF1-206ENST00000445265 NLRC3Q7RTR2 1065 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 SCGB1C1Q8TD33 95 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 S1PR5Q9H228 398 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 QPCTLQ9NXS2 382 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 SLC23A1Q9UHI7 598 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 WDR81Q562E7 1941 aa15.15■□□□□ 0.02
TCOF1-206ENST00000445265 FITM1A5D6W6 292 aa15.14■□□□□ 0.01
TCOF1-206ENST00000445265 E9PI62 339 aa15.14■□□□□ 0.01
TCOF1-206ENST00000445265 DOK2O60496 412 aa15.14■□□□□ 0.01
TCOF1-206ENST00000445265 APEHP13798 732 aaKnown RBP15.14■□□□□ 0.01
TCOF1-206ENST00000445265 S100A2P29034 98 aa15.14■□□□□ 0.01
TCOF1-206ENST00000445265 RPS27P42677 84 aaKnown RBP15.14■□□□□ 0.01
TCOF1-206ENST00000445265 ZNF74Q16587 644 aa15.14■□□□□ 0.01
TCOF1-206ENST00000445265 LCN10Q6JVE6 187 aa15.14■□□□□ 0.01
TCOF1-206ENST00000445265 ASB13Q8WXK3 278 aa15.14■□□□□ 0.01
TCOF1-206ENST00000445265 DUSP23Q9BVJ7 150 aa15.14■□□□□ 0.01
TCOF1-206ENST00000445265 JAM3Q9BX67 310 aa15.14■□□□□ 0.01
TCOF1-206ENST00000445265 FBXO34Q9NWN3 711 aa15.14■□□□□ 0.01
TCOF1-206ENST00000445265 MEIKINA0A087WXM9 373 aa15.14■□□□□ 0.01
TCOF1-206ENST00000445265 BHLHE40O14503 412 aa15.14■□□□□ 0.01
TCOF1-206ENST00000445265 APOBEC1P41238 236 aaKnown RBP15.14■□□□□ 0.01
TCOF1-206ENST00000445265 LUMP51884 338 aaPredicted RBP15.14■□□□□ 0.01
TCOF1-206ENST00000445265 LSM11P83369 360 aaKnown RBP eCLIP15.14■□□□□ 0.01
TCOF1-206ENST00000445265 FAM122CQ6P4D5 195 aa15.14■□□□□ 0.01
TCOF1-206ENST00000445265 DND1Q8IYX4 353 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms