RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 C12orf71A8MTZ7 269 aa12.32□□□□□ -0.44
SSBP3-208ENST00000444533 DEFB108AA8MXU0 73 aa12.32□□□□□ -0.44
SSBP3-208ENST00000444533 H0YHG0 523 aa12.32□□□□□ -0.44
SSBP3-208ENST00000444533 HLA-DQA2P01906 255 aa12.32□□□□□ -0.44
SSBP3-208ENST00000444533 CRYAAP02489 173 aa12.32□□□□□ -0.44
SSBP3-208ENST00000444533 HRGP04196 525 aa12.32□□□□□ -0.44
SSBP3-208ENST00000444533 CBR1P16152 277 aa12.32□□□□□ -0.44
SSBP3-208ENST00000444533 MSR1P21757 451 aa12.32□□□□□ -0.44
SSBP3-208ENST00000444533 LAP3P28838 519 aa12.32□□□□□ -0.44
SSBP3-208ENST00000444533 GRK5P34947 590 aa12.32□□□□□ -0.44
SSBP3-208ENST00000444533 CDKN2AP42771 156 aaKnown RBP12.32□□□□□ -0.44
SSBP3-208ENST00000444533 PTDSS1P48651 473 aaKnown RBP12.32□□□□□ -0.44
SSBP3-208ENST00000444533 RAB1AP62820 205 aa12.32□□□□□ -0.44
SSBP3-208ENST00000444533 HSF2Q03933 536 aa12.32□□□□□ -0.44
SSBP3-208ENST00000444533 PIGFQ07326 219 aa12.32□□□□□ -0.44
SSBP3-208ENST00000444533 BSPH1Q075Z2 132 aa12.32□□□□□ -0.44
SSBP3-208ENST00000444533 GINS1Q14691 196 aa12.32□□□□□ -0.44
SSBP3-208ENST00000444533 PGGHGQ32M88 737 aa12.32□□□□□ -0.44
SSBP3-208ENST00000444533 NCMAPQ5T1S8 102 aa12.32□□□□□ -0.44
SSBP3-208ENST00000444533 SLC22A25Q6T423 547 aa12.32□□□□□ -0.44
SSBP3-208ENST00000444533 C22orf34Q6ZV56 151 aa12.32□□□□□ -0.44
SSBP3-208ENST00000444533 WDFY1Q8IWB7 410 aa12.32□□□□□ -0.44
SSBP3-208ENST00000444533 ALDH16A1Q8IZ83 802 aa12.32□□□□□ -0.44
SSBP3-208ENST00000444533 PQLC1Q8N2U9 271 aa12.32□□□□□ -0.44
SSBP3-208ENST00000444533 OR10H5Q8NGA6 315 aa12.32□□□□□ -0.44
SSBP3-208ENST00000444533 EME1Q96AY2 570 aa12.32□□□□□ -0.44
SSBP3-208ENST00000444533 OTULINQ96BN8 352 aa12.32□□□□□ -0.44
SSBP3-208ENST00000444533 WACQ9BTA9 647 aa12.32□□□□□ -0.44
SSBP3-208ENST00000444533 PLA2G12AQ9BZM1 189 aa12.32□□□□□ -0.44
SSBP3-208ENST00000444533 GABARAPL1Q9H0R8 117 aa12.32□□□□□ -0.44
SSBP3-208ENST00000444533 C1orf198Q9H425 327 aa12.32□□□□□ -0.44
SSBP3-208ENST00000444533 SRA1Q9HD15 236 aaKnown RBP12.32□□□□□ -0.44
SSBP3-208ENST00000444533 RPRD1BQ9NQG5 326 aaKnown RBP12.32□□□□□ -0.44
SSBP3-208ENST00000444533 VSTM5A8MXK1 200 aa12.31□□□□□ -0.44
SSBP3-208ENST00000444533 ANKRD65E5RJM6 399 aa12.31□□□□□ -0.44
SSBP3-208ENST00000444533 H3BNX3 289 aa12.31□□□□□ -0.44
SSBP3-208ENST00000444533 ABCD4O14678 606 aa12.31□□□□□ -0.44
SSBP3-208ENST00000444533 HLA-HP01893 362 aa12.31□□□□□ -0.44
SSBP3-208ENST00000444533 CD40P25942 277 aa12.31□□□□□ -0.44
SSBP3-208ENST00000444533 CDAP32320 146 aa12.31□□□□□ -0.44
SSBP3-208ENST00000444533 GIPRP48546 466 aa12.31□□□□□ -0.44
SSBP3-208ENST00000444533 DAPP51397 102 aa12.31□□□□□ -0.44
SSBP3-208ENST00000444533 CRISP1P54107 249 aa12.31□□□□□ -0.44
SSBP3-208ENST00000444533 RAD23AP54725 363 aa12.31□□□□□ -0.44
SSBP3-208ENST00000444533 TUBA1BP68363 451 aa12.31□□□□□ -0.44
SSBP3-208ENST00000444533 TUBA4AP68366 448 aa12.31□□□□□ -0.44
SSBP3-208ENST00000444533 ZNF704Q6ZNC4 412 aaPredicted RBP12.31□□□□□ -0.44
SSBP3-208ENST00000444533 PTCHD4Q6ZW05 846 aa12.31□□□□□ -0.44
SSBP3-208ENST00000444533 TUBA1AQ71U36 451 aa12.31□□□□□ -0.44
SSBP3-208ENST00000444533 MDP1Q86V88 176 aa12.31□□□□□ -0.44
SSBP3-208ENST00000444533 CDC20BQ86Y33 519 aa12.31□□□□□ -0.44
SSBP3-208ENST00000444533 PROKR2Q8NFJ6 384 aa12.31□□□□□ -0.44
SSBP3-208ENST00000444533 OR8D4Q8NGM9 314 aa12.31□□□□□ -0.44
SSBP3-208ENST00000444533 NMD3Q96D46 503 aaKnown RBP12.31□□□□□ -0.44
SSBP3-208ENST00000444533 CIB1Q99828 191 aa12.31□□□□□ -0.44
SSBP3-208ENST00000444533 SH3GL3Q99963 347 aa12.31□□□□□ -0.44
SSBP3-208ENST00000444533 CDADC1Q9BWV3 514 aa12.31□□□□□ -0.44
SSBP3-208ENST00000444533 NUAK2Q9H093 628 aa12.31□□□□□ -0.44
SSBP3-208ENST00000444533 CMC2Q9NRP2 79 aa12.31□□□□□ -0.44
SSBP3-208ENST00000444533 REV1Q9UBZ9 1251 aa12.31□□□□□ -0.44
SSBP3-208ENST00000444533 SPEF1Q9Y4P9 236 aa12.31□□□□□ -0.44
SSBP3-208ENST00000444533 FKBP7Q9Y680 259 aa12.31□□□□□ -0.44
SSBP3-208ENST00000444533 ALPK2Q86TB3 2170 aa12.3□□□□□ -0.44
SSBP3-208ENST00000444533 FAM221AA4D161 298 aa12.3□□□□□ -0.44
SSBP3-208ENST00000444533 IGFBP1P08833 259 aaPredicted RBP12.3□□□□□ -0.44
SSBP3-208ENST00000444533 CST2P09228 141 aa12.3□□□□□ -0.44
SSBP3-208ENST00000444533 CTLA4P16410 223 aa12.3□□□□□ -0.44
SSBP3-208ENST00000444533 IDH3GP51553 393 aaPredicted RBP12.3□□□□□ -0.44
SSBP3-208ENST00000444533 BLVRAP53004 296 aa12.3□□□□□ -0.44
SSBP3-208ENST00000444533 FAM27BQ5VT28 67 aa12.3□□□□□ -0.44
SSBP3-208ENST00000444533 KDM4DQ6B0I6 523 aa12.3□□□□□ -0.44
SSBP3-208ENST00000444533 ZNF771Q7L3S4 317 aaPredicted RBP12.3□□□□□ -0.44
SSBP3-208ENST00000444533 SKA3Q8IX90 412 aa12.3□□□□□ -0.44
SSBP3-208ENST00000444533 OR1J2Q8NGS2 313 aa12.3□□□□□ -0.44
SSBP3-208ENST00000444533 RACGAP1Q9H0H5 632 aa12.3□□□□□ -0.44
SSBP3-208ENST00000444533 UBTD1Q9HAC8 227 aa12.3□□□□□ -0.44
SSBP3-208ENST00000444533 POLE4Q9NR33 117 aa12.3□□□□□ -0.44
SSBP3-208ENST00000444533 FAIMQ9NVQ4 179 aa12.3□□□□□ -0.44
SSBP3-208ENST00000444533 NPAP1Q9NZP6 1156 aa12.3□□□□□ -0.44
SSBP3-208ENST00000444533 COA3Q9Y2R0 106 aaPredicted RBP12.3□□□□□ -0.44
SSBP3-208ENST00000444533 TIMM10BQ9Y5J6 103 aa12.3□□□□□ -0.44
SSBP3-208ENST00000444533 ASH1LQ9NR48 2969 aaKnown RBP12.3□□□□□ -0.44
SSBP3-208ENST00000444533 FLNBO75369 2602 aaKnown RBP12.29□□□□□ -0.44
SSBP3-208ENST00000444533 DPRXA6NFQ7 191 aa12.29□□□□□ -0.44
SSBP3-208ENST00000444533 PRR23D1E9PI22 279 aaPredicted RBP12.29□□□□□ -0.44
SSBP3-208ENST00000444533 TMCC2O75069 709 aa12.29□□□□□ -0.44
SSBP3-208ENST00000444533 IGKV3-15P01624 115 aa12.29□□□□□ -0.44
SSBP3-208ENST00000444533 PRR23D2P0DMB1 279 aaPredicted RBP12.29□□□□□ -0.44
SSBP3-208ENST00000444533 PRF1P14222 555 aa12.29□□□□□ -0.44
SSBP3-208ENST00000444533 ZNF823P16415 610 aa12.29□□□□□ -0.44
SSBP3-208ENST00000444533 APLNRP35414 380 aa12.29□□□□□ -0.44
SSBP3-208ENST00000444533 LSM6P62312 80 aaKnown RBP12.29□□□□□ -0.44
SSBP3-208ENST00000444533 CDK5Q00535 292 aa12.29□□□□□ -0.44
SSBP3-208ENST00000444533 GALK2Q01415 458 aa12.29□□□□□ -0.44
SSBP3-208ENST00000444533 SCRN3Q0VDG4 424 aa12.29□□□□□ -0.44
SSBP3-208ENST00000444533 RCN1Q15293 331 aa12.29□□□□□ -0.44
SSBP3-208ENST00000444533 SNAPC1Q16533 368 aa12.29□□□□□ -0.44
SSBP3-208ENST00000444533 ADAM5Q6NVV9 412 aa12.29□□□□□ -0.44
SSBP3-208ENST00000444533 UNQ6126/PRO20091Q6UXV3 157 aa12.29□□□□□ -0.44
SSBP3-208ENST00000444533 ZBTB49Q6ZSB9 765 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms