RNA–Protein interactions for RNA: ENST00000441438.2

SYNE2-206, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 3,084 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-206ENST00000441438 FAM189A1O60320 539 aa9.46□□□□□ -0.89
SYNE2-206ENST00000441438 TPST2O60704 377 aa9.46□□□□□ -0.89
SYNE2-206ENST00000441438 S1PR2O95136 353 aa9.46□□□□□ -0.89
SYNE2-206ENST00000441438 MPZL1O95297 269 aa9.46□□□□□ -0.89
SYNE2-206ENST00000441438 FUT3P21217 361 aa9.46□□□□□ -0.89
SYNE2-206ENST00000441438 PRLHRP49683 370 aa9.46□□□□□ -0.89
SYNE2-206ENST00000441438 CKS1BP61024 79 aa9.46□□□□□ -0.89
SYNE2-206ENST00000441438 EIPR1Q53HC9 387 aa9.46□□□□□ -0.89
SYNE2-206ENST00000441438 PDZD11Q5EBL8 140 aa9.46□□□□□ -0.89
SYNE2-206ENST00000441438 HIST2H2BCQ6DN03 193 aa9.46□□□□□ -0.89
SYNE2-206ENST00000441438 HIST2H2BDQ6DRA6 164 aa9.46□□□□□ -0.89
SYNE2-206ENST00000441438 ZNF529Q6P280 563 aa9.46□□□□□ -0.89
SYNE2-206ENST00000441438 DCUN1D2Q6PH85 259 aa9.46□□□□□ -0.89
SYNE2-206ENST00000441438 BTNL8Q6UX41 500 aa9.46□□□□□ -0.89
SYNE2-206ENST00000441438 B3GNT8Q7Z7M8 397 aa9.46□□□□□ -0.89
SYNE2-206ENST00000441438 KIR2DL5AQ8N109 375 aa9.46□□□□□ -0.89
SYNE2-206ENST00000441438 SLC26A10Q8NG04 563 aa9.46□□□□□ -0.89
SYNE2-206ENST00000441438 KIR2DL5BQ8NHK3 375 aa9.46□□□□□ -0.89
SYNE2-206ENST00000441438 ABHD5Q8WTS1 349 aa9.46□□□□□ -0.89
SYNE2-206ENST00000441438 SPRYD4Q8WW59 207 aaPredicted RBP9.46□□□□□ -0.89
SYNE2-206ENST00000441438 BPIFA2Q96DR5 249 aa9.46□□□□□ -0.89
SYNE2-206ENST00000441438 RASL10BQ96S79 203 aa9.46□□□□□ -0.89
SYNE2-206ENST00000441438 TTYH2Q9BSA4 534 aa9.46□□□□□ -0.89
SYNE2-206ENST00000441438 HCAR1Q9BXC0 346 aa9.46□□□□□ -0.89
SYNE2-206ENST00000441438 TMPRSS5Q9H3S3 457 aa9.46□□□□□ -0.89
SYNE2-206ENST00000441438 INPP5EQ9NRR6 644 aa9.46□□□□□ -0.89
SYNE2-206ENST00000441438 DNMT3BQ9UBC3 853 aaKnown RBP9.46□□□□□ -0.89
SYNE2-206ENST00000441438 PRSS21Q9Y6M0 314 aa9.46□□□□□ -0.89
SYNE2-206ENST00000441438 OR5H14A6NHG9 310 aa9.46□□□□□ -0.9
SYNE2-206ENST00000441438 SEC14L6B5MCN3 397 aa9.46□□□□□ -0.9
SYNE2-206ENST00000441438 GPR31O00270 319 aa9.46□□□□□ -0.9
SYNE2-206ENST00000441438 SSNA1O43805 119 aa9.46□□□□□ -0.9
SYNE2-206ENST00000441438 DEAF1O75398 565 aaPredicted RBP9.46□□□□□ -0.9
SYNE2-206ENST00000441438 SLC25A12O75746 678 aa9.46□□□□□ -0.9
SYNE2-206ENST00000441438 CNMDO75829 334 aa9.46□□□□□ -0.9
SYNE2-206ENST00000441438 KRT33AO76009 404 aa9.46□□□□□ -0.9
SYNE2-206ENST00000441438 HOXB2P14652 356 aa9.46□□□□□ -0.9
SYNE2-206ENST00000441438 HIST1H1BP16401 226 aaKnown RBP9.46□□□□□ -0.9
SYNE2-206ENST00000441438 BMP7P18075 431 aa9.46□□□□□ -0.9
SYNE2-206ENST00000441438 CAV2P51636 162 aa9.46□□□□□ -0.9
SYNE2-206ENST00000441438 RHOAP61586 193 aa9.46□□□□□ -0.9
SYNE2-206ENST00000441438 CXADRP78310 365 aa9.46□□□□□ -0.9
SYNE2-206ENST00000441438 C2orf80Q0P641 193 aa9.46□□□□□ -0.9
SYNE2-206ENST00000441438 ARL13AQ5H913 290 aaPredicted RBP9.46□□□□□ -0.9
SYNE2-206ENST00000441438 OLIG3Q7RTU3 272 aa9.46□□□□□ -0.9
SYNE2-206ENST00000441438 ZNF808Q8N4W9 903 aaPredicted RBP9.46□□□□□ -0.9
SYNE2-206ENST00000441438 LFNGQ8NES3 379 aa9.46□□□□□ -0.9
SYNE2-206ENST00000441438 TNFAIP8L1Q8WVP5 186 aa9.46□□□□□ -0.9
SYNE2-206ENST00000441438 UBIAD1Q9Y5Z9 338 aa9.46□□□□□ -0.9
SYNE2-206ENST00000441438 SMIM9A6NGZ8 99 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 ARPC1BO15143 372 aaKnown RBP9.45□□□□□ -0.9
SYNE2-206ENST00000441438 GGCTO75223 188 aaKnown RBP9.45□□□□□ -0.9
SYNE2-206ENST00000441438 CTGFP29279 349 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 EPHA2P29317 976 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 TNFRSF4P43489 277 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 RAP2BP61225 183 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 DYNLT1P63172 113 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 CCNIQ14094 377 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 SYPL1Q16563 259 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 GGTA1PQ4G0N0 100 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 GALNT10Q86SR1 603 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 MRPL52Q86TS9 123 aaKnown RBP9.45□□□□□ -0.9
SYNE2-206ENST00000441438 NPAS3Q8IXF0 933 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 MUC20Q8N307 709 aaPredicted RBP9.45□□□□□ -0.9
SYNE2-206ENST00000441438 OR4S2Q8NH73 311 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 NPRL2Q8WTW4 380 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 C10orf35Q96D05 121 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 EGLN3Q9H6Z9 239 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 ARMCX1Q9P291 453 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 SHISA7A6NL88 538 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 VENTXO95231 258 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 ZSCAN5DPP0CG00 497 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 EPHA3P29320 983 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 KIR2DL2P43627 348 aaPredicted RBP9.45□□□□□ -0.9
SYNE2-206ENST00000441438 RAE1P78406 368 aaKnown RBP9.45□□□□□ -0.9
SYNE2-206ENST00000441438 NEDD8Q15843 81 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 SMARCD3Q6STE5 483 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 MDGA2Q7Z553 956 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 OR10Q1Q8NGQ4 319 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 BAALCQ8WXS3 180 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 LGALS12Q96DT0 336 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 CCDC126Q96EE4 140 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 TGM7Q96PF1 710 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 EPYCQ99645 322 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 RNF39Q9H2S5 420 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 MFSD1Q9H3U5 465 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 TAS2R13Q9NYV9 303 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 SLC35A3Q9Y2D2 325 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 MTCH2Q9Y6C9 303 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 SIP14410 1827 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 MYH9P35579 1960 aaKnown RBP9.45□□□□□ -0.9
SYNE2-206ENST00000441438 ZCWPW2A0A1B0GU75 182 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 OR6C6A6NF89 314 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 YY2O15391 372 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 RGS14O43566 566 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 EDN1P05305 212 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 FOLR1P15328 257 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 CEACAM7Q14002 265 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 GABRA6Q16445 453 aa9.45□□□□□ -0.9
SYNE2-206ENST00000441438 Q5BKY6 102 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms