RNA–Protein interactions for RNA: ENST00000440083.6

TNFRSF1A-204, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 1,034 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-204ENST00000440083 ARL5BQ96KC2 179 aa12.96□□□□□ -0.33
TNFRSF1A-204ENST00000440083 C4orf36Q96KX1 117 aa12.96□□□□□ -0.33
TNFRSF1A-204ENST00000440083 ZNF649Q9BS31 505 aa12.96□□□□□ -0.33
TNFRSF1A-204ENST00000440083 RERGLQ9H628 205 aa12.96□□□□□ -0.33
TNFRSF1A-204ENST00000440083 TMEM185BQ9H7F4 350 aa12.96□□□□□ -0.33
TNFRSF1A-204ENST00000440083 BABAM2Q9NXR7 383 aa12.96□□□□□ -0.33
TNFRSF1A-204ENST00000440083 B3GALT5Q9Y2C3 310 aa12.96□□□□□ -0.33
TNFRSF1A-204ENST00000440083 GSTK1Q9Y2Q3 226 aa12.96□□□□□ -0.33
TNFRSF1A-204ENST00000440083 MEMO1Q9Y316 297 aa12.96□□□□□ -0.33
TNFRSF1A-204ENST00000440083 MRPS18CQ9Y3D5 142 aaKnown RBP12.96□□□□□ -0.33
TNFRSF1A-204ENST00000440083 HDGFL3Q9Y3E1 203 aa12.96□□□□□ -0.33
TNFRSF1A-204ENST00000440083 FAM215AQ9Y5M1 114 aa12.96□□□□□ -0.33
TNFRSF1A-204ENST00000440083 A0A1B0GUH1 482 aa12.95□□□□□ -0.34
TNFRSF1A-204ENST00000440083 A0A1W2PNV4 684 aa12.95□□□□□ -0.34
TNFRSF1A-204ENST00000440083 A0A1W2PQL4 384 aaPredicted RBP12.95□□□□□ -0.34
TNFRSF1A-204ENST00000440083 NPIPB13A6NJU9 1138 aa12.95□□□□□ -0.34
TNFRSF1A-204ENST00000440083 FAM171A2A8MVW0 826 aa12.95□□□□□ -0.34
TNFRSF1A-204ENST00000440083 NPIPB4C9JG80 1138 aa12.95□□□□□ -0.34
TNFRSF1A-204ENST00000440083 SELENOFO60613 162 aa12.95□□□□□ -0.34
TNFRSF1A-204ENST00000440083 ZG16O60844 167 aa12.95□□□□□ -0.34
TNFRSF1A-204ENST00000440083 ACTL6AO96019 429 aa12.95□□□□□ -0.34
TNFRSF1A-204ENST00000440083 TFP02787 698 aa12.95□□□□□ -0.34
TNFRSF1A-204ENST00000440083 POU3F2P20265 443 aaPredicted RBP12.95□□□□□ -0.34
TNFRSF1A-204ENST00000440083 SFTPDP35247 375 aa12.95□□□□□ -0.34
TNFRSF1A-204ENST00000440083 CENPAP49450 140 aa12.95□□□□□ -0.34
TNFRSF1A-204ENST00000440083 LHX2P50458 406 aa12.95□□□□□ -0.34
TNFRSF1A-204ENST00000440083 GBX2P52951 348 aaPredicted RBP12.95□□□□□ -0.34
TNFRSF1A-204ENST00000440083 BLVRAP53004 296 aa12.95□□□□□ -0.34
TNFRSF1A-204ENST00000440083 CLDN18P56856 261 aa12.95□□□□□ -0.34
TNFRSF1A-204ENST00000440083 ADORA2A-AS1P86434 159 aa12.95□□□□□ -0.34
TNFRSF1A-204ENST00000440083 DCTN2Q13561 401 aaKnown RBP12.95□□□□□ -0.34
TNFRSF1A-204ENST00000440083 MELKQ14680 651 aa12.95□□□□□ -0.34
TNFRSF1A-204ENST00000440083 TRAM1Q15629 374 aa12.95□□□□□ -0.34
TNFRSF1A-204ENST00000440083 GLYR1Q49A26 553 aaPredicted RBP12.95□□□□□ -0.34
TNFRSF1A-204ENST00000440083 SLC16A9Q7RTY1 509 aa12.95□□□□□ -0.34
TNFRSF1A-204ENST00000440083 UBQLNLQ8IYU4 475 aa12.95□□□□□ -0.34
TNFRSF1A-204ENST00000440083 SNX33Q8WV41 574 aa12.95□□□□□ -0.34
TNFRSF1A-204ENST00000440083 CCDC120Q96HB5 630 aa12.95□□□□□ -0.34
TNFRSF1A-204ENST00000440083 DMRTA2Q96SC8 542 aa12.95□□□□□ -0.34
TNFRSF1A-204ENST00000440083 COQ7Q99807 217 aa12.95□□□□□ -0.34
TNFRSF1A-204ENST00000440083 SYT4Q9H2B2 425 aa12.95□□□□□ -0.34
TNFRSF1A-204ENST00000440083 RNF167Q9H6Y7 350 aa12.95□□□□□ -0.34
TNFRSF1A-204ENST00000440083 ISG20L2Q9H9L3 353 aaKnown RBP12.95□□□□□ -0.34
TNFRSF1A-204ENST00000440083 PLGRKTQ9HBL7 147 aa12.95□□□□□ -0.34
TNFRSF1A-204ENST00000440083 SRA1Q9HD15 236 aaKnown RBP12.95□□□□□ -0.34
TNFRSF1A-204ENST00000440083 FKBP7Q9Y680 259 aa12.95□□□□□ -0.34
TNFRSF1A-204ENST00000440083 PRSS37A4D1T9 235 aa12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 METTL15A6NJ78 407 aa12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 GJE1A6NN92 205 aa12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 SEC14L5O43304 696 aa12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 RGS9O75916 674 aaPredicted RBP12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 AKR7A3O95154 331 aa12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 LALBAP00709 142 aa12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 HLA-DPB1P04440 258 aa12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 CELP19835 753 aa12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 SHC1P29353 583 aa12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 CRYBB2P43320 205 aa12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 CLDN20P56880 219 aa12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 SLC35A1P78382 337 aa12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 POU3F1Q03052 451 aaPredicted RBP12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 DBPQ10586 325 aaPredicted RBP12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 GPR50Q13585 617 aa12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 ZNF404Q494X3 552 aa12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 ACSF3Q4G176 576 aaPredicted RBP12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 C1orf185Q5T7R7 199 aa12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 LINC01590Q5TEZ4 76 aa12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 EEF1A1P5Q5VTE0 462 aa12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 RPTNQ6XPR3 784 aa12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 LINC00299Q6ZSB3 139 aa12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 VASH1Q7L8A9 365 aaPredicted RBP12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 HDDC2Q7Z4H3 204 aa12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 FAM220AQ7Z4H9 259 aa12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 UEVLDQ8IX04 471 aa12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 PM20D2Q8IYS1 436 aa12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 SYS1Q8N2H4 156 aa12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 S100ZQ8WXG8 99 aa12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 ASB10Q8WXI3 467 aa12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 TMEM203Q969S6 136 aa12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 KCTD7Q96MP8 289 aa12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 TSSK2Q96PF2 358 aa12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 INTS14Q96SY0 518 aa12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 MNTQ99583 582 aa12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 PIGQQ9BRB3 760 aa12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 TMED9Q9BVK6 235 aa12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 TTTY10Q9BZA0 68 aa12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 WDR12Q9GZL7 423 aaKnown RBP12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 PRDM14Q9GZV8 571 aa12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 TP63Q9H3D4 680 aaPredicted RBP12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 TXNL4BQ9NX01 149 aaKnown RBP12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 VSX1Q9NZR4 365 aaPredicted RBP12.94□□□□□ -0.34
TNFRSF1A-204ENST00000440083 TRDV1A0A1B0GX56 115 aa12.93□□□□□ -0.34
TNFRSF1A-204ENST00000440083 A0A1W2PNR3 127 aa12.93□□□□□ -0.34
TNFRSF1A-204ENST00000440083 FIGNL2A6NMB9 653 aa12.93□□□□□ -0.34
TNFRSF1A-204ENST00000440083 PHYHO14832 338 aa12.93□□□□□ -0.34
TNFRSF1A-204ENST00000440083 EFNA2O43921 213 aa12.93□□□□□ -0.34
TNFRSF1A-204ENST00000440083 HLA-DQA2P01906 255 aa12.93□□□□□ -0.34
TNFRSF1A-204ENST00000440083 GLI4P10075 376 aa12.93□□□□□ -0.34
TNFRSF1A-204ENST00000440083 ZNF708P17019 499 aa12.93□□□□□ -0.34
TNFRSF1A-204ENST00000440083 CD53P19397 219 aa12.93□□□□□ -0.34
TNFRSF1A-204ENST00000440083 CRABP1P29762 137 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms