RNA–Protein interactions for RNA: ENST00000439487.5

SEMA3B-206, Transcript of semaphorin 3B, humanhuman

TSL 3

Gene SEMA3B, Length 594 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-206ENST00000439487 RAB1AP62820 205 aa16.94■□□□□ 0.3
SEMA3B-206ENST00000439487 MRPS34P82930 218 aaKnown RBP16.94■□□□□ 0.3
SEMA3B-206ENST00000439487 ZNF672Q499Z4 452 aaPredicted RBP16.94■□□□□ 0.3
SEMA3B-206ENST00000439487 LEG1Q6P5S2 330 aa16.94■□□□□ 0.3
SEMA3B-206ENST00000439487 SHQ1Q6PI26 577 aaKnown RBP16.94■□□□□ 0.3
SEMA3B-206ENST00000439487 SLC22A25Q6T423 547 aa16.94■□□□□ 0.3
SEMA3B-206ENST00000439487 CD300LDQ6UXZ3 194 aa16.94■□□□□ 0.3
SEMA3B-206ENST00000439487 SLC16A14Q7RTX9 510 aa16.94■□□□□ 0.3
SEMA3B-206ENST00000439487 YTHDF3Q7Z739 585 aaKnown RBP16.94■□□□□ 0.3
SEMA3B-206ENST00000439487 ADCK1Q86TW2 530 aa16.94■□□□□ 0.3
SEMA3B-206ENST00000439487 JAZF1Q86VZ6 243 aa16.94■□□□□ 0.3
SEMA3B-206ENST00000439487 FAM169BQ8N8A8 192 aa16.94■□□□□ 0.3
SEMA3B-206ENST00000439487 OR4K13Q8NH42 304 aa16.94■□□□□ 0.3
SEMA3B-206ENST00000439487 PYDC1Q8WXC3 89 aa16.94■□□□□ 0.3
SEMA3B-206ENST00000439487 LRTOMTQ8WZ04 291 aa16.94■□□□□ 0.3
SEMA3B-206ENST00000439487 NABP1Q96AH0 204 aa16.94■□□□□ 0.3
SEMA3B-206ENST00000439487 FOXN4Q96NZ1 517 aa16.94■□□□□ 0.3
SEMA3B-206ENST00000439487 TSSK6Q9BXA6 273 aa16.94■□□□□ 0.3
SEMA3B-206ENST00000439487 SYT4Q9H2B2 425 aa16.94■□□□□ 0.3
SEMA3B-206ENST00000439487 RERGLQ9H628 205 aa16.94■□□□□ 0.3
SEMA3B-206ENST00000439487 SIAEQ9HAT2 523 aa16.94■□□□□ 0.3
SEMA3B-206ENST00000439487 BHLHE40O14503 412 aa16.93■□□□□ 0.3
SEMA3B-206ENST00000439487 IDH3BO43837 385 aa16.93■□□□□ 0.3
SEMA3B-206ENST00000439487 SLC16A7O60669 478 aa16.93■□□□□ 0.3
SEMA3B-206ENST00000439487 ENTPD5O75356 428 aa16.93■□□□□ 0.3
SEMA3B-206ENST00000439487 RAF1P04049 648 aa16.93■□□□□ 0.3
SEMA3B-206ENST00000439487 CTLA4P16410 223 aa16.93■□□□□ 0.3
SEMA3B-206ENST00000439487 NPR2P20594 1047 aa16.93■□□□□ 0.3
SEMA3B-206ENST00000439487 GIPRP48546 466 aa16.93■□□□□ 0.3
SEMA3B-206ENST00000439487 PTDSS1P48651 473 aaKnown RBP16.93■□□□□ 0.3
SEMA3B-206ENST00000439487 ARHGDIAP52565 204 aa16.93■□□□□ 0.3
SEMA3B-206ENST00000439487 CDH11P55287 796 aa16.93■□□□□ 0.3
SEMA3B-206ENST00000439487 COX10Q12887 443 aa16.93■□□□□ 0.3
SEMA3B-206ENST00000439487 C3orf36Q3SXR2 165 aa16.93■□□□□ 0.3
SEMA3B-206ENST00000439487 NRN1LQ496H8 165 aa16.93■□□□□ 0.3
SEMA3B-206ENST00000439487 DEPDC4Q8N2C3 294 aa16.93■□□□□ 0.3
SEMA3B-206ENST00000439487 OR4Q3Q8NH05 313 aa16.93■□□□□ 0.3
SEMA3B-206ENST00000439487 OR5K1Q8NHB7 308 aa16.93■□□□□ 0.3
SEMA3B-206ENST00000439487 NRBF2Q96F24 287 aa16.93■□□□□ 0.3
SEMA3B-206ENST00000439487 RADILQ96JH8 1075 aa16.93■□□□□ 0.3
SEMA3B-206ENST00000439487 ZNF75AQ96N20 296 aa16.93■□□□□ 0.3
SEMA3B-206ENST00000439487 RAB3IPQ96QF0 476 aaPredicted RBP16.93■□□□□ 0.3
SEMA3B-206ENST00000439487 NMNAT3Q96T66 252 aa16.93■□□□□ 0.3
SEMA3B-206ENST00000439487 RNF121Q9H920 327 aa16.93■□□□□ 0.3
SEMA3B-206ENST00000439487 MOV10Q9HCE1 1003 aaKnown RBP16.93■□□□□ 0.3
SEMA3B-206ENST00000439487 REV1Q9UBZ9 1251 aa16.93■□□□□ 0.3
SEMA3B-206ENST00000439487 POU2F3Q9UKI9 436 aa16.93■□□□□ 0.3
SEMA3B-206ENST00000439487 MOKQ9UQ07 419 aa16.93■□□□□ 0.3
SEMA3B-206ENST00000439487 ATP23Q9Y6H3 246 aa16.93■□□□□ 0.3
SEMA3B-206ENST00000439487 AKAP9Q99996 3911 aa16.93■□□□□ 0.3
SEMA3B-206ENST00000439487 PRRC2AP48634 2157 aaKnown RBP16.92■□□□□ 0.3
SEMA3B-206ENST00000439487 ATP6V1G2-DDX39BF2Z307 99 aa16.92■□□□□ 0.3
SEMA3B-206ENST00000439487 ATE1O95260 518 aa16.92■□□□□ 0.3
SEMA3B-206ENST00000439487 RAB36O95755 333 aa16.92■□□□□ 0.3
SEMA3B-206ENST00000439487 SCG5P05408 212 aa16.92■□□□□ 0.3
SEMA3B-206ENST00000439487 FCGR1AP12314 374 aa16.92■□□□□ 0.3
SEMA3B-206ENST00000439487 ANXA8P13928 327 aa16.92■□□□□ 0.3
SEMA3B-206ENST00000439487 DNASE1P24855 282 aa16.92■□□□□ 0.3
SEMA3B-206ENST00000439487 NAAAQ02083 359 aa16.92■□□□□ 0.3
SEMA3B-206ENST00000439487 KEAP1Q14145 624 aa16.92■□□□□ 0.3
SEMA3B-206ENST00000439487 RAB39AQ14964 217 aa16.92■□□□□ 0.3
SEMA3B-206ENST00000439487 B3GLCTQ6Y288 498 aa16.92■□□□□ 0.3
SEMA3B-206ENST00000439487 FOXL2NBQ6ZUU3 175 aa16.92■□□□□ 0.3
SEMA3B-206ENST00000439487 ZNF611Q8N823 705 aa16.92■□□□□ 0.3
SEMA3B-206ENST00000439487 SDR9C7Q8NEX9 313 aa16.92■□□□□ 0.3
SEMA3B-206ENST00000439487 OR52E2Q8NGJ4 325 aa16.92■□□□□ 0.3
SEMA3B-206ENST00000439487 FBXW5Q969U6 566 aa16.92■□□□□ 0.3
SEMA3B-206ENST00000439487 MS4A3Q96HJ5 214 aa16.92■□□□□ 0.3
SEMA3B-206ENST00000439487 TSSK2Q96PF2 358 aa16.92■□□□□ 0.3
SEMA3B-206ENST00000439487 KCNS3Q9BQ31 491 aa16.92■□□□□ 0.3
SEMA3B-206ENST00000439487 BDH2Q9BUT1 245 aa16.92■□□□□ 0.3
SEMA3B-206ENST00000439487 NUAK2Q9H093 628 aa16.92■□□□□ 0.3
SEMA3B-206ENST00000439487 ZNF556Q9HAH1 456 aa16.92■□□□□ 0.3
SEMA3B-206ENST00000439487 CISD1Q9NZ45 108 aaKnown RBP16.92■□□□□ 0.3
SEMA3B-206ENST00000439487 ITGB1BP2Q9UKP3 347 aa16.92■□□□□ 0.3
SEMA3B-206ENST00000439487 EDARQ9UNE0 448 aa16.92■□□□□ 0.3
SEMA3B-206ENST00000439487 COA3Q9Y2R0 106 aaPredicted RBP16.92■□□□□ 0.3
SEMA3B-206ENST00000439487 ARFGEF3Q5TH69 2177 aa16.91■□□□□ 0.3
SEMA3B-206ENST00000439487 MAP1AP78559 2803 aaPredicted RBP16.91■□□□□ 0.3
SEMA3B-206ENST00000439487 E7EQL1 145 aa16.91■□□□□ 0.3
SEMA3B-206ENST00000439487 H3BN98 237 aa16.91■□□□□ 0.3
SEMA3B-206ENST00000439487 KHDRBS3O75525 346 aaKnown RBP16.91■□□□□ 0.3
SEMA3B-206ENST00000439487 RENP00797 406 aa16.91■□□□□ 0.3
SEMA3B-206ENST00000439487 ZNF14P17017 642 aaPredicted RBP16.91■□□□□ 0.3
SEMA3B-206ENST00000439487 CD53P19397 219 aa16.91■□□□□ 0.3
SEMA3B-206ENST00000439487 LAP3P28838 519 aa16.91■□□□□ 0.3
SEMA3B-206ENST00000439487 CALCRP30988 508 aa16.91■□□□□ 0.3
SEMA3B-206ENST00000439487 GUCA1AP43080 201 aaPredicted RBP16.91■□□□□ 0.3
SEMA3B-206ENST00000439487 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.91■□□□□ 0.3
SEMA3B-206ENST00000439487 DBPQ10586 325 aaPredicted RBP16.91■□□□□ 0.3
SEMA3B-206ENST00000439487 SLC36A2Q495M3 483 aa16.91■□□□□ 0.3
SEMA3B-206ENST00000439487 SLC36A3Q495N2 470 aa16.91■□□□□ 0.3
SEMA3B-206ENST00000439487 TMEM53Q6P2H8 277 aa16.91■□□□□ 0.3
SEMA3B-206ENST00000439487 C20orf204Q6ZNR8 217 aa16.91■□□□□ 0.3
SEMA3B-206ENST00000439487 ATG16L2Q8NAA4 619 aa16.91■□□□□ 0.3
SEMA3B-206ENST00000439487 NINJ1Q92982 152 aa16.91■□□□□ 0.3
SEMA3B-206ENST00000439487 SEMA6AQ9H2E6 1030 aa16.91■□□□□ 0.3
SEMA3B-206ENST00000439487 KCNN2Q9H2S1 579 aa16.91■□□□□ 0.3
SEMA3B-206ENST00000439487 FN3KQ9H479 309 aa16.91■□□□□ 0.3
SEMA3B-206ENST00000439487 SRA1Q9HD15 236 aaKnown RBP16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms