RNA–Protein interactions for RNA: ENST00000439453.5

HPS4-206, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 3,936 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-206ENST00000439453 C10orf91Q5T1B1 145 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 RAB12Q6IQ22 244 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 C11orf87Q6NUJ2 197 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 LRRTM1Q86UE6 522 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 NRROSQ86YC3 692 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 XKR8Q9H6D3 395 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 KCNE5Q9UJ90 142 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 MKL2Q9ULH7 1088 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 CARHSP1Q9Y2V2 147 aaKnown RBP7.76□□□□□ -1.17
HPS4-206ENST00000439453 FRYQ5TBA9 3013 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 POM121BA6NF01 834 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 PEX12O00623 359 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 SLC25A4P12235 298 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 NID1P14543 1247 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 RPS4Y1P22090 263 aaKnown RBP7.76□□□□□ -1.17
HPS4-206ENST00000439453 GRPRP30550 384 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 DLSTP36957 453 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 CSNK1EP49674 416 aaKnown RBP7.76□□□□□ -1.17
HPS4-206ENST00000439453 RPS21P63220 83 aaKnown RBP7.76□□□□□ -1.17
HPS4-206ENST00000439453 TSC22D1Q15714 1073 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 Q499Y3 187 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 H3F3CQ6NXT2 135 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 OR2A1Q8NGT9 310 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 RXFP4Q8TDU9 374 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 RNF166Q96A37 237 aaPredicted RBP7.76□□□□□ -1.17
HPS4-206ENST00000439453 SLC17A9Q9BYT1 436 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 ZNF350Q9GZX5 532 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 TMEM27Q9HBJ8 222 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 COMMD9Q9P000 198 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 UPB1Q9UBR1 384 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 IER3IP1Q9Y5U9 82 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 SPTBN4Q9H254 2564 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 SCN3AQ9NY46 2000 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 TRAV20A0A0B4J274 112 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 A0A1B0GTI1 187 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 A0A1B0GVT2 93 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 TMEM82A0PJX8 343 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 GXYLT2A0PJZ3 443 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 RNF222A6NCQ9 220 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 PRR32B1ATL7 298 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 SGCEO43556 437 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 F12P00748 615 aaPredicted RBP7.76□□□□□ -1.17
HPS4-206ENST00000439453 ANXA2P07355 339 aaKnown RBP7.76□□□□□ -1.17
HPS4-206ENST00000439453 AK4P27144 223 aaPredicted RBP7.76□□□□□ -1.17
HPS4-206ENST00000439453 ATXN7L3Q14CW9 347 aaPredicted RBP7.76□□□□□ -1.17
HPS4-206ENST00000439453 IRF4Q15306 451 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 LRRC37A5PQ49AS3 106 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 NKAIN2Q5VXU1 208 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 STEAP1BQ6NZ63 245 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 TMEM71Q6P5X7 295 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 ANKRD16Q6P6B7 361 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 ACOT7LQ6ZUV0 252 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 ZNF227Q86WZ6 799 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 OR5M8Q8NGP6 311 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 ZNF559Q9BR84 538 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 CRB3Q9BUF7 120 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 LGR4Q9BXB1 951 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 SLC22A11Q9NSA0 550 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 FBXO34Q9NWN3 711 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 LHX6Q9UPM6 363 aa7.76□□□□□ -1.17
HPS4-206ENST00000439453 TRAV18A0A075B6X5 111 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 LOC105378220A0A1B0GUY1 285 aaPredicted RBP7.75□□□□□ -1.17
HPS4-206ENST00000439453 SULT1C2O00338 296 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 SMAD9O15198 467 aaKnown RBP7.75□□□□□ -1.17
HPS4-206ENST00000439453 CTAG2O75638 210 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 RPP14O95059 124 aaKnown RBP7.75□□□□□ -1.17
HPS4-206ENST00000439453 SNAPINO95295 136 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 NPBWR1P48145 328 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 EFNB2P52799 333 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 PSMD4P55036 377 aaKnown RBP7.75□□□□□ -1.17
HPS4-206ENST00000439453 NXPH1P58417 271 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 METRNLQ641Q3 311 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 ENPP7Q6UWV6 458 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 FAM122BQ7Z309 247 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 TMED4Q7Z7H5 227 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 LRRC25Q8N386 305 aaPredicted RBP7.75□□□□□ -1.17
HPS4-206ENST00000439453 OR6K6Q8NGW6 343 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 LRFN5Q96NI6 719 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 TLNRD1Q9H1K6 362 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 SPHK1Q9NYA1 384 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 APOBEC3BQ9UH17 382 aaKnown RBP7.75□□□□□ -1.17
HPS4-206ENST00000439453 LAMA5O15230 3695 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 AKAP13Q12802 2813 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 PTPRZ1P23471 2315 aaPredicted RBP7.75□□□□□ -1.17
HPS4-206ENST00000439453 MEX3AA1L020 520 aaKnown RBP7.75□□□□□ -1.17
HPS4-206ENST00000439453 OR6C76A6NM76 312 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 IMPA2O14732 288 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 MAS1P04201 325 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 CSRP1P21291 193 aaKnown RBP7.75□□□□□ -1.17
HPS4-206ENST00000439453 AFF3P51826 1226 aaKnown RBP7.75□□□□□ -1.17
HPS4-206ENST00000439453 DPTQ07507 201 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 SRSF4Q08170 494 aaKnown RBP7.75□□□□□ -1.17
HPS4-206ENST00000439453 SLC6A19Q695T7 634 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 DBX2Q6ZNG2 339 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 SLC43A2Q8N370 569 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 OR13H1Q8NG92 308 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 OR1J4Q8NGS1 313 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 STEAP1Q9UHE8 339 aa7.75□□□□□ -1.17
HPS4-206ENST00000439453 NOSIPQ9Y314 301 aaKnown RBP7.75□□□□□ -1.17
HPS4-206ENST00000439453 SNRNP200O75643 2136 aaKnown RBP7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms