RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 HRGP04196 525 aa18.25■□□□□ 0.51
CHD3-204ENST00000439235 GAAP10253 952 aa18.25■□□□□ 0.51
CHD3-204ENST00000439235 SLC35A2P78381 396 aa18.25■□□□□ 0.51
CHD3-204ENST00000439235 HSF2Q03933 536 aa18.25■□□□□ 0.51
CHD3-204ENST00000439235 FAPQ12884 760 aa18.25■□□□□ 0.51
CHD3-204ENST00000439235 B3GLCTQ6Y288 498 aa18.25■□□□□ 0.51
CHD3-204ENST00000439235 FOXL2NBQ6ZUU3 175 aa18.25■□□□□ 0.51
CHD3-204ENST00000439235 LINGO2Q7L985 606 aa18.25■□□□□ 0.51
CHD3-204ENST00000439235 STX19Q8N4C7 294 aa18.25■□□□□ 0.51
CHD3-204ENST00000439235 ZNF511Q8NB15 262 aa18.25■□□□□ 0.51
CHD3-204ENST00000439235 SLC26A10Q8NG04 563 aa18.25■□□□□ 0.51
CHD3-204ENST00000439235 OR10H5Q8NGA6 315 aa18.25■□□□□ 0.51
CHD3-204ENST00000439235 STARD4Q96DR4 205 aa18.25■□□□□ 0.51
CHD3-204ENST00000439235 COPS4Q9BT78 406 aa18.25■□□□□ 0.51
CHD3-204ENST00000439235 PIGMQ9H3S5 423 aa18.25■□□□□ 0.51
CHD3-204ENST00000439235 ZNF696Q9H7X3 374 aa18.25■□□□□ 0.51
CHD3-204ENST00000439235 MARCH7Q9H992 704 aa18.25■□□□□ 0.51
CHD3-204ENST00000439235 SEC61A2Q9H9S3 476 aa18.25■□□□□ 0.51
CHD3-204ENST00000439235 EXOGQ9Y2C4 368 aaKnown RBP18.25■□□□□ 0.51
CHD3-204ENST00000439235 UGT2A1Q9Y4X1 527 aa18.25■□□□□ 0.51
CHD3-204ENST00000439235 BSNQ9UPA5 3926 aa18.25■□□□□ 0.51
CHD3-204ENST00000439235 FLNBO75369 2602 aaKnown RBP18.24■□□□□ 0.51
CHD3-204ENST00000439235 A0A0G2JNJ9 132 aa18.24■□□□□ 0.51
CHD3-204ENST00000439235 TVP23AA6NH52 213 aa18.24■□□□□ 0.51
CHD3-204ENST00000439235 CCL21O00585 134 aa18.24■□□□□ 0.51
CHD3-204ENST00000439235 RAB36O95755 333 aa18.24■□□□□ 0.51
CHD3-204ENST00000439235 CGAP01215 116 aa18.24■□□□□ 0.51
CHD3-204ENST00000439235 MRPL3P09001 348 aaKnown RBP18.24■□□□□ 0.51
CHD3-204ENST00000439235 SBK2P0C263 348 aa18.24■□□□□ 0.51
CHD3-204ENST00000439235 NPR2P20594 1047 aa18.24■□□□□ 0.51
CHD3-204ENST00000439235 SH3BGRP55822 239 aaPredicted RBP18.24■□□□□ 0.51
CHD3-204ENST00000439235 MRPS34P82930 218 aaKnown RBP18.24■□□□□ 0.51
CHD3-204ENST00000439235 SLC16A9Q7RTY1 509 aa18.24■□□□□ 0.51
CHD3-204ENST00000439235 ERI1Q8IV48 349 aaKnown RBP18.24■□□□□ 0.51
CHD3-204ENST00000439235 FOXN4Q96NZ1 517 aa18.24■□□□□ 0.51
CHD3-204ENST00000439235 FOXB1Q99853 325 aa18.24■□□□□ 0.51
CHD3-204ENST00000439235 RHNO1Q9BSD3 238 aa18.24■□□□□ 0.51
CHD3-204ENST00000439235 NELFAQ9H3P2 528 aa18.24■□□□□ 0.51
CHD3-204ENST00000439235 DUSP21Q9H596 190 aa18.24■□□□□ 0.51
CHD3-204ENST00000439235 ADGRL4Q9HBW9 690 aa18.24■□□□□ 0.51
CHD3-204ENST00000439235 ZNF629Q9UEG4 869 aaPredicted RBP18.24■□□□□ 0.51
CHD3-204ENST00000439235 Q9UFV3 132 aa18.24■□□□□ 0.51
CHD3-204ENST00000439235 KCNG2Q9UJ96 466 aa18.24■□□□□ 0.51
CHD3-204ENST00000439235 COMMD3-BMI1R4GMX3 469 aa18.24■□□□□ 0.51
CHD3-204ENST00000439235 SHANK1Q9Y566 2161 aa18.24■□□□□ 0.51
CHD3-204ENST00000439235 A0A1B0GUH1 482 aa18.23■□□□□ 0.51
CHD3-204ENST00000439235 ZNF99A8MXY4 864 aaPredicted RBP18.23■□□□□ 0.51
CHD3-204ENST00000439235 RGS10O43665 173 aa18.23■□□□□ 0.51
CHD3-204ENST00000439235 MRPS14O60783 128 aaKnown RBP18.23■□□□□ 0.51
CHD3-204ENST00000439235 APOL3O95236 402 aa18.23■□□□□ 0.51
CHD3-204ENST00000439235 GPANK1O95872 356 aa18.23■□□□□ 0.51
CHD3-204ENST00000439235 PRB1P04280 392 aa18.23■□□□□ 0.51
CHD3-204ENST00000439235 LYNP07948 512 aa18.23■□□□□ 0.51
CHD3-204ENST00000439235 ZNF823P16415 610 aa18.23■□□□□ 0.51
CHD3-204ENST00000439235 MSR1P21757 451 aa18.23■□□□□ 0.51
CHD3-204ENST00000439235 DCKP27707 260 aa18.23■□□□□ 0.51
CHD3-204ENST00000439235 MPGP29372 298 aa18.23■□□□□ 0.51
CHD3-204ENST00000439235 NAA10P41227 235 aaPredicted RBP18.23■□□□□ 0.51
CHD3-204ENST00000439235 ENTPD1P49961 510 aa18.23■□□□□ 0.51
CHD3-204ENST00000439235 ACTC1P68032 377 aa18.23■□□□□ 0.51
CHD3-204ENST00000439235 ACTA1P68133 377 aa18.23■□□□□ 0.51
CHD3-204ENST00000439235 ADAM8P78325 824 aa18.23■□□□□ 0.51
CHD3-204ENST00000439235 ST3GAL4Q11206 333 aa18.23■□□□□ 0.51
CHD3-204ENST00000439235 KCNMB1Q16558 191 aa18.23■□□□□ 0.51
CHD3-204ENST00000439235 NRN1LQ496H8 165 aa18.23■□□□□ 0.51
CHD3-204ENST00000439235 LYPD4Q6UWN0 246 aa18.23■□□□□ 0.51
CHD3-204ENST00000439235 Q6ZT83 130 aa18.23■□□□□ 0.51
CHD3-204ENST00000439235 TIGD4Q8IY51 512 aa18.23■□□□□ 0.51
CHD3-204ENST00000439235 ZNF843Q8N446 348 aa18.23■□□□□ 0.51
CHD3-204ENST00000439235 OR52I1Q8NGK6 324 aa18.23■□□□□ 0.51
CHD3-204ENST00000439235 OR6N2Q8NGY6 317 aa18.23■□□□□ 0.51
CHD3-204ENST00000439235 C11orf40Q8WZ69 217 aa18.23■□□□□ 0.51
CHD3-204ENST00000439235 TMEM80Q96HE8 168 aa18.23■□□□□ 0.51
CHD3-204ENST00000439235 MNTQ99583 582 aa18.23■□□□□ 0.51
CHD3-204ENST00000439235 YIPF3Q9GZM5 350 aa18.23■□□□□ 0.51
CHD3-204ENST00000439235 FGF20Q9NP95 211 aaPredicted RBP18.23■□□□□ 0.51
CHD3-204ENST00000439235 POLE4Q9NR33 117 aa18.23■□□□□ 0.51
CHD3-204ENST00000439235 TMEM38BQ9NVV0 291 aa18.23■□□□□ 0.51
CHD3-204ENST00000439235 PAK1IP1Q9NWT1 392 aaPredicted RBP18.23■□□□□ 0.51
CHD3-204ENST00000439235 SMG1Q96Q15 3661 aaKnown RBP18.23■□□□□ 0.51
CHD3-204ENST00000439235 SPTA1P02549 2419 aa18.22■□□□□ 0.51
CHD3-204ENST00000439235 MAGEA13PA6NCF6 341 aa18.22■□□□□ 0.51
CHD3-204ENST00000439235 DVL2O14641 736 aa18.22■□□□□ 0.51
CHD3-204ENST00000439235 SELENOFO60613 162 aa18.22■□□□□ 0.51
CHD3-204ENST00000439235 TFP02787 698 aa18.22■□□□□ 0.51
CHD3-204ENST00000439235 CDK1P06493 297 aa18.22■□□□□ 0.51
CHD3-204ENST00000439235 RPSAP08865 295 aaKnown RBP18.22■□□□□ 0.51
CHD3-204ENST00000439235 CDAP32320 146 aa18.22■□□□□ 0.51
CHD3-204ENST00000439235 SGCAQ16586 387 aa18.22■□□□□ 0.51
CHD3-204ENST00000439235 MTFR2Q6P444 385 aa18.22■□□□□ 0.51
CHD3-204ENST00000439235 BEND4Q6ZU67 534 aa18.22■□□□□ 0.51
CHD3-204ENST00000439235 NCCRP1Q6ZVX7 275 aaPredicted RBP18.22■□□□□ 0.51
CHD3-204ENST00000439235 SHFQ7M4L6 423 aa18.22■□□□□ 0.51
CHD3-204ENST00000439235 SLC35F2Q8IXU6 374 aa18.22■□□□□ 0.51
CHD3-204ENST00000439235 OR4F15Q8NGB8 312 aa18.22■□□□□ 0.51
CHD3-204ENST00000439235 ZNF837Q96EG3 531 aaPredicted RBP18.22■□□□□ 0.51
CHD3-204ENST00000439235 MRPL22Q9NWU5 206 aaKnown RBP18.22■□□□□ 0.51
CHD3-204ENST00000439235 DIMT1Q9UNQ2 313 aaKnown RBP18.22■□□□□ 0.51
CHD3-204ENST00000439235 POLR1DQ9Y2S0 133 aa18.22■□□□□ 0.51
CHD3-204ENST00000439235 GTF3C1Q12789 2109 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms