RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 IQSEC2Q5JU85 1478 aa2.36□□□□□ -2.03
TRAPPC13-204ENST00000438419 URB2Q14146 1524 aaKnown RBP2.36□□□□□ -2.03
TRAPPC13-204ENST00000438419 CEMIPQ8WUJ3 1361 aa2.36□□□□□ -2.03
TRAPPC13-204ENST00000438419 A0A0B4J2A0 478 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 ZNF816-ZNF321PA0A0X1KG74 233 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 PRSS37A4D1T9 235 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 LAD1O00515 517 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 KMOO15229 486 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 SLC25A27O95847 323 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 IGHV3-43DP0DP04 118 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 SFTPCP11686 197 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 ZNF250P15622 560 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 GALP22466 123 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 GTF2E2P29084 291 aaKnown RBP2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 RFX3P48380 749 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 NMUP48645 174 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 LHX2P50458 406 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 SSR4P51571 173 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 KRTAP10-1P60331 282 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 NUTF2P61970 127 aaKnown RBP2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 TWF1Q12792 350 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 MERTKQ12866 999 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 SELENBP1Q13228 472 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 EIF4EBP2Q13542 120 aaPredicted RBP2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 CLINT1Q14677 625 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 ZSCAN26Q16670 478 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 Q6P435 159 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 TMEM179Q6ZVK1 233 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 CAMK2N1Q7Z7J9 78 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 LUZP2Q86TE4 346 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 MREGQ8N565 214 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 ARIH2OSQ8N7S6 290 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 FBXL13Q8NEE6 735 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 SRSF12Q8WXF0 261 aaKnown RBP2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 ASB9Q96DX5 294 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 PIK3IP1Q96FE7 263 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 RNF185Q96GF1 192 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 P2RX4Q99571 388 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 GEMIN7Q9H840 131 aaKnown RBP2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 KCNJ16Q9NPI9 418 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 ZNF226Q9NYT6 803 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 UXTQ9UBK9 157 aaPredicted RBP2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 SHPKQ9UHJ6 478 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 PRG3Q9Y2Y8 225 aaPredicted RBP2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 GOLT1BQ9Y3E0 138 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 F11RQ9Y624 299 aaKnown RBP2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 LRP4O75096 1905 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 IFT140Q96RY7 1462 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 NFASCO94856 1347 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 SETBP1Q9Y6X0 1596 aa2.35□□□□□ -2.03
TRAPPC13-204ENST00000438419 KIF21BO75037 1637 aa2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 TRBV6-6A0A0A6YYG2 114 aa2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 TRBV11-1A0A0K0K1C0 115 aa2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 GLYATL1P3A0A0U1RQE8 302 aa2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 SERTM2A0A1B0GWG4 89 aa2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 FAM166BA8MTA8 275 aa2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 WRBO00258 174 aa2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 CLPXO76031 633 aa2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 UTS2O95399 124 aa2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 AIFM1O95831 613 aa2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 SERPINA5P05154 406 aa2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 PCCAP05165 728 aaPredicted RBP2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 ZNF30P17039 623 aa2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 FOXN2P32314 431 aa2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 SLC1A1P43005 524 aa2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 CCR6P51684 374 aa2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 RAB10P61026 200 aa2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 PRPSAP1Q14558 356 aa2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 CHRNA6Q15825 494 aa2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 KCTD19Q17RG1 926 aaPredicted RBP2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 VAX1Q5SQQ9 334 aa2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 AGBL2Q5U5Z8 902 aa2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 C22orf42Q6IC83 251 aa2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 REEP3Q6NUK4 255 aa2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 BZW1Q7L1Q6 419 aaKnown RBP2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 C6orf120Q7Z4R8 191 aa2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 CMTM1Q8IZ96 169 aa2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 OFCC1Q8IZS5 231 aa2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 OR4C5Q8NGB2 326 aa2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 OR10R2Q8NGX6 335 aa2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 FAM210BQ96KR6 192 aa2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 SH3GL3Q99963 347 aa2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 C11orf70Q9BRQ4 267 aa2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 RACGAP1Q9H0H5 632 aa2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 CDC42EP4Q9H3Q1 356 aaKnown RBP2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 EXO5Q9H790 373 aa2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 RAB26Q9ULW5 256 aa2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 MAP3K15Q6ZN16 1313 aa2.34□□□□□ -2.03
TRAPPC13-204ENST00000438419 AQRO60306 1485 aaKnown RBP eCLIP2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 FANCD2Q9BXW9 1451 aa2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 BAZ1BQ9UIG0 1483 aaKnown RBP2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 NKX2-6A6NCS4 301 aa2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 TEX46H3BTG2 121 aa2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 PES1O00541 588 aaKnown RBP2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 DPM1O60762 260 aa2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 PRB2P02812 416 aaPredicted RBP2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 FGF4P08620 206 aa2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 ACSM4P0C7M7 580 aa2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 ANXA8P13928 327 aa2.34□□□□□ -2.04
TRAPPC13-204ENST00000438419 DCKP27707 260 aa2.34□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 69.5 ms