RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 FIGLAQ6QHK4 219 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 TFAP2EQ6VUC0 442 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 NECAP1Q8NC96 275 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 OR10D4PQ8NGN7 298 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 PDLIM5Q96HC4 596 aaKnown RBP10.66□□□□□ -0.7
PTCH1-209ENST00000437951 FYTTD1Q96QD9 318 aaKnown RBP10.66□□□□□ -0.7
PTCH1-209ENST00000437951 CDCA4Q9BXL8 241 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 RHOFQ9HBH0 211 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 GNG12Q9UBI6 72 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 GALR3O60755 368 aaPredicted RBP10.66□□□□□ -0.7
PTCH1-209ENST00000437951 BCL6P41182 706 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 Q6ZVL8 140 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 OBP2BQ9NPH6 170 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 CRYM-AS1A6NIL9 109 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 GABRR3A8MPY1 467 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 LEFTY2O00292 366 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 SIGLEC6O43699 453 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 SMIM17P0DL12 118 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 RABIFP47224 123 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 GZMKP49863 264 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 ELLP55199 621 aaPredicted RBP10.66□□□□□ -0.7
PTCH1-209ENST00000437951 PJVKQ0ZLH3 352 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 OR2G6Q5TZ20 316 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 PSAPL1Q6NUJ1 521 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 LSRQ86X29 649 aaPredicted RBP10.66□□□□□ -0.7
PTCH1-209ENST00000437951 TMEM38AQ9H6F2 299 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 RARRES3Q9UL19 164 aa10.66□□□□□ -0.7
PTCH1-209ENST00000437951 PXDNQ92626 1479 aa10.65□□□□□ -0.7
PTCH1-209ENST00000437951 LIMS3P0CW19 117 aa10.65□□□□□ -0.7
PTCH1-209ENST00000437951 LIMS4P0CW20 117 aa10.65□□□□□ -0.7
PTCH1-209ENST00000437951 ZNF26P17031 533 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-209ENST00000437951 MPGP29372 298 aa10.65□□□□□ -0.7
PTCH1-209ENST00000437951 SLC6A11P48066 632 aa10.65□□□□□ -0.7
PTCH1-209ENST00000437951 OR7E24Q6IFN5 339 aa10.65□□□□□ -0.7
PTCH1-209ENST00000437951 ACVR1CQ8NER5 493 aa10.65□□□□□ -0.7
PTCH1-209ENST00000437951 MACROD1Q9BQ69 325 aa10.65□□□□□ -0.7
PTCH1-209ENST00000437951 DLL4Q9NR61 685 aa10.65□□□□□ -0.7
PTCH1-209ENST00000437951 SIX1Q15475 284 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-209ENST00000437951 LHX4Q969G2 390 aa10.65□□□□□ -0.7
PTCH1-209ENST00000437951 PEX11GQ96HA9 241 aa10.65□□□□□ -0.7
PTCH1-209ENST00000437951 PCDHGA9Q9Y5G4 932 aaKnown RBP10.65□□□□□ -0.7
PTCH1-209ENST00000437951 TRBV4-1A0A0J9YWV2 114 aa10.65□□□□□ -0.7
PTCH1-209ENST00000437951 CYC1P08574 325 aa10.65□□□□□ -0.7
PTCH1-209ENST00000437951 CFHP08603 1231 aa10.65□□□□□ -0.7
PTCH1-209ENST00000437951 ZNF888P0CJ79 500 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-209ENST00000437951 AREGP15514 252 aa10.65□□□□□ -0.7
PTCH1-209ENST00000437951 SHC1P29353 583 aa10.65□□□□□ -0.7
PTCH1-209ENST00000437951 CDC20BQ86Y33 519 aa10.65□□□□□ -0.7
PTCH1-209ENST00000437951 RAB24Q969Q5 203 aa10.65□□□□□ -0.7
PTCH1-209ENST00000437951 MAP6Q96JE9 813 aa10.65□□□□□ -0.7
PTCH1-209ENST00000437951 C2orf50Q96LR7 162 aa10.65□□□□□ -0.7
PTCH1-209ENST00000437951 MS4A10Q96PG2 267 aa10.65□□□□□ -0.7
PTCH1-209ENST00000437951 TMEM184BQ9Y519 407 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-209ENST00000437951 GALR1P47211 349 aa10.65□□□□□ -0.7
PTCH1-209ENST00000437951 RACK1P63244 317 aaKnown RBP10.65□□□□□ -0.7
PTCH1-209ENST00000437951 NNATQ16517 81 aa10.65□□□□□ -0.7
PTCH1-209ENST00000437951 DHRS4L2Q6PKH6 230 aa10.65□□□□□ -0.7
PTCH1-209ENST00000437951 CPPED1Q9BRF8 314 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-209ENST00000437951 PIRO00625 290 aa10.65□□□□□ -0.7
PTCH1-209ENST00000437951 IL5P05113 134 aa10.65□□□□□ -0.7
PTCH1-209ENST00000437951 ATXN1LP0C7T5 689 aaKnown RBP10.65□□□□□ -0.7
PTCH1-209ENST00000437951 SDHAP31040 664 aa10.65□□□□□ -0.7
PTCH1-209ENST00000437951 NPY4RP50391 375 aa10.65□□□□□ -0.7
PTCH1-209ENST00000437951 HLXQ14774 488 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-209ENST00000437951 STUMQ69YW2 141 aa10.65□□□□□ -0.7
PTCH1-209ENST00000437951 PM20D1Q6GTS8 502 aa10.65□□□□□ -0.7
PTCH1-209ENST00000437951 THNSL2Q86YJ6 484 aa10.65□□□□□ -0.7
PTCH1-209ENST00000437951 MFSD4AQ8N468 514 aa10.65□□□□□ -0.7
PTCH1-209ENST00000437951 SHARPINQ9H0F6 387 aa10.65□□□□□ -0.7
PTCH1-209ENST00000437951 MARCH4Q9P2E8 410 aaPredicted RBP10.65□□□□□ -0.7
PTCH1-209ENST00000437951 ZCWPW2A0A1B0GU75 182 aa10.65□□□□□ -0.71
PTCH1-209ENST00000437951 A0A1W2PPQ1 181 aa10.65□□□□□ -0.71
PTCH1-209ENST00000437951 CHRM4P08173 479 aa10.65□□□□□ -0.71
PTCH1-209ENST00000437951 PNRC1Q12796 327 aaPredicted RBP10.65□□□□□ -0.71
PTCH1-209ENST00000437951 GLYATL3Q5SZD4 288 aa10.65□□□□□ -0.71
PTCH1-209ENST00000437951 CMTM8Q8IZV2 173 aa10.65□□□□□ -0.71
PTCH1-209ENST00000437951 DEFB119Q8N690 84 aa10.65□□□□□ -0.71
PTCH1-209ENST00000437951 PNPLA1Q8N8W4 532 aa10.65□□□□□ -0.71
PTCH1-209ENST00000437951 OR10P1Q8NGE3 313 aa10.65□□□□□ -0.71
PTCH1-209ENST00000437951 LKAAEAR1Q8TD35 194 aa10.65□□□□□ -0.71
PTCH1-209ENST00000437951 PCNPQ8WW12 178 aaKnown RBP10.65□□□□□ -0.71
PTCH1-209ENST00000437951 UCN3Q969E3 161 aa10.65□□□□□ -0.71
PTCH1-209ENST00000437951 OR10C1Q96KK4 312 aa10.65□□□□□ -0.71
PTCH1-209ENST00000437951 GPR78Q96P69 363 aa10.65□□□□□ -0.71
PTCH1-209ENST00000437951 BARHL1Q9BZE3 327 aa10.65□□□□□ -0.71
PTCH1-209ENST00000437951 RIMS4Q9H426 269 aaPredicted RBP10.65□□□□□ -0.71
PTCH1-209ENST00000437951 BOLA1Q9Y3E2 137 aa10.65□□□□□ -0.71
PTCH1-209ENST00000437951 NKX6-3A6NJ46 265 aa10.64□□□□□ -0.71
PTCH1-209ENST00000437951 C17orf105B2RV13 164 aa10.64□□□□□ -0.71
PTCH1-209ENST00000437951 B4DEV8 164 aa10.64□□□□□ -0.71
PTCH1-209ENST00000437951 SELEP16581 610 aa10.64□□□□□ -0.71
PTCH1-209ENST00000437951 UBE2MP61081 183 aaKnown RBP10.64□□□□□ -0.71
PTCH1-209ENST00000437951 CTU2Q2VPK5 515 aaKnown RBP10.64□□□□□ -0.71
PTCH1-209ENST00000437951 TMEM88Q6PEY1 159 aa10.64□□□□□ -0.71
PTCH1-209ENST00000437951 LYG2Q86SG7 212 aa10.64□□□□□ -0.71
PTCH1-209ENST00000437951 LSMEM1Q8N8F7 131 aa10.64□□□□□ -0.71
PTCH1-209ENST00000437951 ZFP62Q8NB50 900 aaPredicted RBP10.64□□□□□ -0.71
PTCH1-209ENST00000437951 CCNL2Q96S94 520 aaPredicted RBP10.64□□□□□ -0.71
PTCH1-209ENST00000437951 SMPD1P17405 629 aa10.64□□□□□ -0.71
PTCH1-209ENST00000437951 CNN1P51911 297 aaKnown RBP10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms