RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 SHISA6Q6ZSJ9 500 aa16.72■□□□□ 0.27
CLK1-205ENST00000434813 GLB1L2Q8IW92 636 aa16.72■□□□□ 0.27
CLK1-205ENST00000434813 OR8K3Q8NH51 312 aa16.72■□□□□ 0.27
CLK1-205ENST00000434813 FOXN4Q96NZ1 517 aa16.72■□□□□ 0.27
CLK1-205ENST00000434813 NKIRAS2Q9NYR9 191 aa16.72■□□□□ 0.27
CLK1-205ENST00000434813 ASXL3Q9C0F0 2248 aa16.72■□□□□ 0.27
CLK1-205ENST00000434813 EXPH5Q8NEV8 1989 aa16.72■□□□□ 0.27
CLK1-205ENST00000434813 H0YC42 278 aa16.72■□□□□ 0.27
CLK1-205ENST00000434813 TOX3O15405 576 aaPredicted RBP16.72■□□□□ 0.27
CLK1-205ENST00000434813 XRCC3O43542 346 aa16.72■□□□□ 0.27
CLK1-205ENST00000434813 TMIGD3P0DMS9 266 aaPredicted RBP16.72■□□□□ 0.27
CLK1-205ENST00000434813 VEGFCP49767 419 aa16.72■□□□□ 0.27
CLK1-205ENST00000434813 GNG2P59768 71 aa16.72■□□□□ 0.27
CLK1-205ENST00000434813 ZP1P60852 638 aa16.72■□□□□ 0.27
CLK1-205ENST00000434813 ADAM8P78325 824 aa16.72■□□□□ 0.27
CLK1-205ENST00000434813 OTPQ5XKR4 325 aa16.72■□□□□ 0.27
CLK1-205ENST00000434813 PIAS4Q8N2W9 510 aaPredicted RBP16.72■□□□□ 0.27
CLK1-205ENST00000434813 APCDD1LQ8NCL9 501 aa16.72■□□□□ 0.27
CLK1-205ENST00000434813 STT3BQ8TCJ2 826 aa16.72■□□□□ 0.27
CLK1-205ENST00000434813 ST8SIA1Q92185 356 aa16.72■□□□□ 0.27
CLK1-205ENST00000434813 FBXL3Q9UKT7 428 aa16.72■□□□□ 0.27
CLK1-205ENST00000434813 FLVCR2Q9UPI3 526 aa16.72■□□□□ 0.27
CLK1-205ENST00000434813 IGHV3-20A0A0C4DH32 117 aa16.71■□□□□ 0.27
CLK1-205ENST00000434813 ANKUB1A6NFN9 424 aa16.71■□□□□ 0.27
CLK1-205ENST00000434813 LAMTOR5O43504 91 aa16.71■□□□□ 0.27
CLK1-205ENST00000434813 HPXP02790 462 aa16.71■□□□□ 0.27
CLK1-205ENST00000434813 CRABP1P29762 137 aa16.71■□□□□ 0.27
CLK1-205ENST00000434813 CCKBRP32239 447 aa16.71■□□□□ 0.27
CLK1-205ENST00000434813 MELKQ14680 651 aa16.71■□□□□ 0.27
CLK1-205ENST00000434813 METTL11BQ5VVY1 283 aa16.71■□□□□ 0.27
CLK1-205ENST00000434813 ZNF454Q8N9F8 522 aa16.71■□□□□ 0.27
CLK1-205ENST00000434813 OR11H4Q8NGC9 324 aa16.71■□□□□ 0.27
CLK1-205ENST00000434813 SLC23A1Q9UHI7 598 aa16.71■□□□□ 0.27
CLK1-205ENST00000434813 PTHLHP12272 177 aa16.7■□□□□ 0.26
CLK1-205ENST00000434813 SUMO3P55854 103 aaPredicted RBP16.7■□□□□ 0.26
CLK1-205ENST00000434813 FOXL2P58012 376 aa16.7■□□□□ 0.26
CLK1-205ENST00000434813 GLO1Q04760 184 aa16.7■□□□□ 0.26
CLK1-205ENST00000434813 PLA2G7Q13093 441 aa16.7■□□□□ 0.26
CLK1-205ENST00000434813 ETFDHQ16134 617 aa16.7■□□□□ 0.26
CLK1-205ENST00000434813 ANKRD16Q6P6B7 361 aa16.7■□□□□ 0.26
CLK1-205ENST00000434813 RABEPKQ7Z6M1 372 aa16.7■□□□□ 0.26
CLK1-205ENST00000434813 KRT77Q7Z794 578 aa16.7■□□□□ 0.26
CLK1-205ENST00000434813 WDR5BQ86VZ2 330 aa16.7■□□□□ 0.26
CLK1-205ENST00000434813 UTP23Q9BRU9 249 aaKnown RBP16.7■□□□□ 0.26
CLK1-205ENST00000434813 BEX1Q9HBH7 125 aa16.7■□□□□ 0.26
CLK1-205ENST00000434813 DLL4Q9NR61 685 aa16.7■□□□□ 0.26
CLK1-205ENST00000434813 SCP2D1Q9UJQ7 156 aa16.7■□□□□ 0.26
CLK1-205ENST00000434813 H3BSH0 61 aa16.7■□□□□ 0.26
CLK1-205ENST00000434813 ARPC1BO15143 372 aaKnown RBP16.7■□□□□ 0.26
CLK1-205ENST00000434813 PNPP00491 289 aa16.7■□□□□ 0.26
CLK1-205ENST00000434813 DCTDP32321 178 aa16.7■□□□□ 0.26
CLK1-205ENST00000434813 RIDAP52758 137 aaKnown RBP16.7■□□□□ 0.26
CLK1-205ENST00000434813 PUDPQ08623 228 aa16.7■□□□□ 0.26
CLK1-205ENST00000434813 SIGLEC14Q08ET2 396 aa16.7■□□□□ 0.26
CLK1-205ENST00000434813 CAMK2DQ13557 499 aa16.7■□□□□ 0.26
CLK1-205ENST00000434813 EIF2B1Q14232 305 aaKnown RBP16.7■□□□□ 0.26
CLK1-205ENST00000434813 PMS2CLQ68D20 193 aa16.7■□□□□ 0.26
CLK1-205ENST00000434813 ANKRD37Q7Z713 158 aa16.7■□□□□ 0.26
CLK1-205ENST00000434813 ZSCAN2Q7Z7L9 614 aaPredicted RBP16.7■□□□□ 0.26
CLK1-205ENST00000434813 NFAM1Q8NET5 270 aaPredicted RBP16.7■□□□□ 0.26
CLK1-205ENST00000434813 OR52N5Q8NH56 324 aa16.7■□□□□ 0.26
CLK1-205ENST00000434813 NXPE2Q96DL1 559 aa16.7■□□□□ 0.26
CLK1-205ENST00000434813 ABHD6Q9BV23 337 aa16.7■□□□□ 0.26
CLK1-205ENST00000434813 SLC7A5P2Q9GIP4 190 aa16.7■□□□□ 0.26
CLK1-205ENST00000434813 OR10A4Q9H209 315 aa16.7■□□□□ 0.26
CLK1-205ENST00000434813 PCNX3Q9H6A9 2034 aa16.7■□□□□ 0.26
CLK1-205ENST00000434813 SUSD2Q9UGT4 822 aa16.7■□□□□ 0.26
CLK1-205ENST00000434813 SLC22A13Q9Y226 551 aa16.7■□□□□ 0.26
CLK1-205ENST00000434813 UNC13CQ8NB66 2214 aa16.69■□□□□ 0.26
CLK1-205ENST00000434813 A6NIZ1 184 aa16.69■□□□□ 0.26
CLK1-205ENST00000434813 DLX5P56178 289 aa16.69■□□□□ 0.26
CLK1-205ENST00000434813 RAP1BP61224 184 aa16.69■□□□□ 0.26
CLK1-205ENST00000434813 RAP1AP62834 184 aa16.69■□□□□ 0.26
CLK1-205ENST00000434813 MFGE8Q08431 387 aaPredicted RBP16.69■□□□□ 0.26
CLK1-205ENST00000434813 ZP4Q12836 540 aa16.69■□□□□ 0.26
CLK1-205ENST00000434813 MFSD13AQ14CX5 517 aa16.69■□□□□ 0.26
CLK1-205ENST00000434813 SHBQ15464 509 aa16.69■□□□□ 0.26
CLK1-205ENST00000434813 LINC00303Q3SY05 128 aa16.69■□□□□ 0.26
CLK1-205ENST00000434813 THOC7Q6I9Y2 204 aaKnown RBP16.69■□□□□ 0.26
CLK1-205ENST00000434813 ASPHD2Q6ICH7 369 aa16.69■□□□□ 0.26
CLK1-205ENST00000434813 OR7E24Q6IFN5 339 aa16.69■□□□□ 0.26
CLK1-205ENST00000434813 CATSPERDQ86XM0 798 aa16.69■□□□□ 0.26
CLK1-205ENST00000434813 NUBPLQ8TB37 319 aa16.69■□□□□ 0.26
CLK1-205ENST00000434813 ZNF436Q9C0F3 470 aaPredicted RBP16.69■□□□□ 0.26
CLK1-205ENST00000434813 NOX3Q9HBY0 568 aa16.69■□□□□ 0.26
CLK1-205ENST00000434813 PRMT8Q9NR22 394 aaPredicted RBP16.69■□□□□ 0.26
CLK1-205ENST00000434813 LRP12Q9Y561 859 aa16.69■□□□□ 0.26
CLK1-205ENST00000434813 NCOR1O75376 2440 aa16.69■□□□□ 0.26
CLK1-205ENST00000434813 MUC3AQ02505 3323 aa16.69■□□□□ 0.26
CLK1-205ENST00000434813 GGT3PA6NGU5 568 aa16.69■□□□□ 0.26
CLK1-205ENST00000434813 NPIPB13A6NJU9 1138 aa16.69■□□□□ 0.26
CLK1-205ENST00000434813 NPIPB4C9JG80 1138 aa16.69■□□□□ 0.26
CLK1-205ENST00000434813 H7C417 338 aa16.69■□□□□ 0.26
CLK1-205ENST00000434813 SLC17A2O00624 439 aa16.69■□□□□ 0.26
CLK1-205ENST00000434813 CTAG2O75638 210 aa16.69■□□□□ 0.26
CLK1-205ENST00000434813 WNT11O96014 354 aa16.69■□□□□ 0.26
CLK1-205ENST00000434813 TPOP07202 933 aa16.69■□□□□ 0.26
CLK1-205ENST00000434813 ITGA5P08648 1049 aa16.69■□□□□ 0.26
CLK1-205ENST00000434813 IL11P20809 199 aa16.69■□□□□ 0.26
CLK1-205ENST00000434813 MECP2P51608 486 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms