RNA–Protein interactions for RNA: ENST00000433541.1

TREX1-201, Transcript of three prime repair exonuclease 1, humanhuman

TSL 1 (best) BASIC

Gene TREX1, Length 1,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-201ENST00000433541 SEZ6L2Q6UXD5 910 aa13.54□□□□□ -0.24
TREX1-201ENST00000433541 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.54□□□□□ -0.24
TREX1-201ENST00000433541 ZDHHC13Q8IUH4 622 aa13.54□□□□□ -0.24
TREX1-201ENST00000433541 SKA3Q8IX90 412 aa13.54□□□□□ -0.24
TREX1-201ENST00000433541 OR2T33Q8NG76 320 aa13.54□□□□□ -0.24
TREX1-201ENST00000433541 AKAP1Q92667 903 aaKnown RBP eCLIP13.54□□□□□ -0.24
TREX1-201ENST00000433541 OTULINQ96BN8 352 aa13.54□□□□□ -0.24
TREX1-201ENST00000433541 DUS3LQ96G46 650 aaKnown RBP13.54□□□□□ -0.24
TREX1-201ENST00000433541 BOD1Q96IK1 185 aa13.54□□□□□ -0.24
TREX1-201ENST00000433541 NMNAT3Q96T66 252 aa13.54□□□□□ -0.24
TREX1-201ENST00000433541 IL20Q9NYY1 176 aa13.54□□□□□ -0.24
TREX1-201ENST00000433541 BAIAP2Q9UQB8 552 aa13.54□□□□□ -0.24
TREX1-201ENST00000433541 POLR1DQ9Y2S0 133 aa13.54□□□□□ -0.24
TREX1-201ENST00000433541 ATP23Q9Y6H3 246 aa13.54□□□□□ -0.24
TREX1-201ENST00000433541 IGKV1D-43A0A0B4J1Z2 117 aa13.53□□□□□ -0.24
TREX1-201ENST00000433541 IGHV1-18A0A0C4DH31 117 aa13.53□□□□□ -0.24
TREX1-201ENST00000433541 RIIAD1A6NNX1 92 aa13.53□□□□□ -0.24
TREX1-201ENST00000433541 CYSRT1A8MQ03 144 aa13.53□□□□□ -0.24
TREX1-201ENST00000433541 ARPC3O15145 178 aa13.53□□□□□ -0.24
TREX1-201ENST00000433541 KHDRBS3O75525 346 aaKnown RBP13.53□□□□□ -0.24
TREX1-201ENST00000433541 TXNDC12O95881 172 aa13.53□□□□□ -0.24
TREX1-201ENST00000433541 HLA-DQA2P01906 255 aa13.53□□□□□ -0.24
TREX1-201ENST00000433541 IGFBP1P08833 259 aaPredicted RBP13.53□□□□□ -0.24
TREX1-201ENST00000433541 PATE4P0C8F1 98 aa13.53□□□□□ -0.24
TREX1-201ENST00000433541 CBR1P16152 277 aa13.53□□□□□ -0.24
TREX1-201ENST00000433541 DNASE1P24855 282 aa13.53□□□□□ -0.24
TREX1-201ENST00000433541 CRABP1P29762 137 aa13.53□□□□□ -0.24
TREX1-201ENST00000433541 CDKN2AP42771 156 aaKnown RBP13.53□□□□□ -0.24
TREX1-201ENST00000433541 GIPRP48546 466 aa13.53□□□□□ -0.24
TREX1-201ENST00000433541 MRPS34P82930 218 aaKnown RBP13.53□□□□□ -0.24
TREX1-201ENST00000433541 HSF2Q03933 536 aa13.53□□□□□ -0.24
TREX1-201ENST00000433541 PLP2Q04941 152 aa13.53□□□□□ -0.24
TREX1-201ENST00000433541 PTCHD4Q6ZW05 846 aa13.53□□□□□ -0.24
TREX1-201ENST00000433541 ZNF627Q7L945 461 aa13.53□□□□□ -0.24
TREX1-201ENST00000433541 SVOPLQ8N434 492 aa13.53□□□□□ -0.24
TREX1-201ENST00000433541 OR8D4Q8NGM9 314 aa13.53□□□□□ -0.24
TREX1-201ENST00000433541 FBXW5Q969U6 566 aa13.53□□□□□ -0.24
TREX1-201ENST00000433541 NRBF2Q96F24 287 aa13.53□□□□□ -0.24
TREX1-201ENST00000433541 TEX12Q9BXU0 123 aa13.53□□□□□ -0.24
TREX1-201ENST00000433541 NUAK2Q9H093 628 aa13.53□□□□□ -0.24
TREX1-201ENST00000433541 LIME1Q9H400 295 aa13.53□□□□□ -0.24
TREX1-201ENST00000433541 FN3KQ9H479 309 aa13.53□□□□□ -0.24
TREX1-201ENST00000433541 SIAEQ9HAT2 523 aa13.53□□□□□ -0.24
TREX1-201ENST00000433541 NTN4Q9HB63 628 aa13.53□□□□□ -0.24
TREX1-201ENST00000433541 SRA1Q9HD15 236 aaKnown RBP13.53□□□□□ -0.24
TREX1-201ENST00000433541 RPRD1BQ9NQG5 326 aaKnown RBP13.53□□□□□ -0.24
TREX1-201ENST00000433541 PAPOLBQ9NRJ5 636 aaKnown RBP13.53□□□□□ -0.24
TREX1-201ENST00000433541 KRT84Q9NSB2 600 aa13.53□□□□□ -0.24
TREX1-201ENST00000433541 MOKQ9UQ07 419 aa13.53□□□□□ -0.24
TREX1-201ENST00000433541 PLEKHA6Q9Y2H5 1048 aa13.53□□□□□ -0.24
TREX1-201ENST00000433541 SPG11Q96JI7 2443 aa13.52□□□□□ -0.24
TREX1-201ENST00000433541 POLQO75417 2590 aa13.52□□□□□ -0.24
TREX1-201ENST00000433541 A0A1W2PPR1 153 aa13.52□□□□□ -0.25
TREX1-201ENST00000433541 ZNF503-AS2A6NEH8 195 aa13.52□□□□□ -0.25
TREX1-201ENST00000433541 SAC3D1A6NKF1 404 aa13.52□□□□□ -0.25
TREX1-201ENST00000433541 ATP6V1G2-DDX39BF2Z307 99 aa13.52□□□□□ -0.25
TREX1-201ENST00000433541 HS3ST1O14792 307 aa13.52□□□□□ -0.25
TREX1-201ENST00000433541 IFNGP01579 166 aa13.52□□□□□ -0.25
TREX1-201ENST00000433541 CELA3BP08861 270 aa13.52□□□□□ -0.25
TREX1-201ENST00000433541 CECR9P0C854 216 aa13.52□□□□□ -0.25
TREX1-201ENST00000433541 CTLA4P16410 223 aa13.52□□□□□ -0.25
TREX1-201ENST00000433541 MSR1P21757 451 aa13.52□□□□□ -0.25
TREX1-201ENST00000433541 ETFDHQ16134 617 aa13.52□□□□□ -0.25
TREX1-201ENST00000433541 DPPA2Q7Z7J5 298 aa13.52□□□□□ -0.25
TREX1-201ENST00000433541 IQCF1Q8N6M8 205 aa13.52□□□□□ -0.25
TREX1-201ENST00000433541 DNAJC9Q8WXX5 260 aa13.52□□□□□ -0.25
TREX1-201ENST00000433541 NEUROG1Q92886 237 aa13.52□□□□□ -0.25
TREX1-201ENST00000433541 CENPNQ96H22 339 aaPredicted RBP13.52□□□□□ -0.25
TREX1-201ENST00000433541 PLEKHA8Q96JA3 519 aa13.52□□□□□ -0.25
TREX1-201ENST00000433541 CCL19Q99731 98 aa13.52□□□□□ -0.25
TREX1-201ENST00000433541 PLEKHF2Q9H8W4 249 aa13.52□□□□□ -0.25
TREX1-201ENST00000433541 VSX1Q9NZR4 365 aaPredicted RBP13.52□□□□□ -0.25
TREX1-201ENST00000433541 ITGB1BP2Q9UKP3 347 aa13.52□□□□□ -0.25
TREX1-201ENST00000433541 FBXL3Q9UKT7 428 aa13.52□□□□□ -0.25
TREX1-201ENST00000433541 COA3Q9Y2R0 106 aaPredicted RBP13.52□□□□□ -0.25
TREX1-201ENST00000433541 IQCMA0A1B0GVH7 501 aa13.51□□□□□ -0.25
TREX1-201ENST00000433541 BHLHE40O14503 412 aa13.51□□□□□ -0.25
TREX1-201ENST00000433541 RAF1P04049 648 aa13.51□□□□□ -0.25
TREX1-201ENST00000433541 OSMP13725 252 aa13.51□□□□□ -0.25
TREX1-201ENST00000433541 LOXP28300 417 aaPredicted RBP13.51□□□□□ -0.25
TREX1-201ENST00000433541 LAP3P28838 519 aa13.51□□□□□ -0.25
TREX1-201ENST00000433541 ZNF133P52736 654 aaPredicted RBP13.51□□□□□ -0.25
TREX1-201ENST00000433541 GALK2Q01415 458 aa13.51□□□□□ -0.25
TREX1-201ENST00000433541 RAB39AQ14964 217 aa13.51□□□□□ -0.25
TREX1-201ENST00000433541 PGGHGQ32M88 737 aa13.51□□□□□ -0.25
TREX1-201ENST00000433541 NRN1LQ496H8 165 aa13.51□□□□□ -0.25
TREX1-201ENST00000433541 ZNF672Q499Z4 452 aaPredicted RBP13.51□□□□□ -0.25
TREX1-201ENST00000433541 SLC27A4Q6P1M0 643 aa13.51□□□□□ -0.25
TREX1-201ENST00000433541 PAMR1Q6UXH9 720 aa13.51□□□□□ -0.25
TREX1-201ENST00000433541 CD300LDQ6UXZ3 194 aa13.51□□□□□ -0.25
TREX1-201ENST00000433541 GLB1L2Q8IW92 636 aa13.51□□□□□ -0.25
TREX1-201ENST00000433541 CYB561A3Q8NBI2 242 aa13.51□□□□□ -0.25
TREX1-201ENST00000433541 PROKR2Q8NFJ6 384 aa13.51□□□□□ -0.25
TREX1-201ENST00000433541 OR10H5Q8NGA6 315 aa13.51□□□□□ -0.25
TREX1-201ENST00000433541 NMD3Q96D46 503 aaKnown RBP13.51□□□□□ -0.25
TREX1-201ENST00000433541 TSSK2Q96PF2 358 aa13.51□□□□□ -0.25
TREX1-201ENST00000433541 EMC7Q9NPA0 242 aa13.51□□□□□ -0.25
TREX1-201ENST00000433541 CISD1Q9NZ45 108 aaKnown RBP13.51□□□□□ -0.25
TREX1-201ENST00000433541 ST6GALNAC2Q9UJ37 374 aa13.51□□□□□ -0.25
TREX1-201ENST00000433541 KLHL21Q9UJP4 597 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms