RNA–Protein interactions for RNA: ENST00000432425.5

CLK1-204, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 1,682 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-204ENST00000432425 P2RY2P41231 377 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 SLC1A2P43004 574 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 CAPZBP47756 277 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 MRPL19P49406 292 aaKnown RBP2.11□□□□□ -2.07
CLK1-204ENST00000432425 SERPINB8P50452 374 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 KPNA2P52292 529 aaKnown RBP2.11□□□□□ -2.07
CLK1-204ENST00000432425 HSPA2P54652 639 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 CDH4P55283 916 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 HERVK_113P63132 956 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 ERVK-25P63136 954 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 PAX5Q02548 391 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 SCRN3Q0VDG4 424 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 TSPAN31Q12999 210 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 NME3Q13232 169 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 TRAM2Q15035 370 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 CHI3L2Q15782 390 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 CDKN3Q16667 212 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 GOLGA7BQ2TAP0 167 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 OR2B11Q5JQS5 317 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 DCST2Q5T1A1 773 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 DUPD1Q68J44 220 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 OR52W1Q6IF63 320 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 LRRC8BQ6P9F7 803 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 FAM151BQ6UXP7 276 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 ARCQ7LC44 396 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 DPY19L4Q7Z388 723 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 S100A7AQ86SG5 101 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 ZNF546Q86UE3 836 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 GPBP1Q86WP2 473 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 CLVS1Q8IUQ0 354 aaPredicted RBP2.11□□□□□ -2.07
CLK1-204ENST00000432425 GABRG1Q8N1C3 465 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 STXBP6Q8NFX7 210 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 OR9G4Q8NGQ1 327 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 OR10Z1Q8NGY1 313 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 ACTL9Q8TC94 416 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 ACOT11Q8WXI4 607 aaPredicted RBP2.11□□□□□ -2.07
CLK1-204ENST00000432425 CCDC124Q96CT7 223 aaKnown RBP2.11□□□□□ -2.07
CLK1-204ENST00000432425 AKR1E2Q96JD6 320 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 CEP170P1Q96L14 293 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 C9orf72Q96LT7 481 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 GLT1D1Q96MS3 346 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 IL4I1Q96RQ9 567 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 PLEKHF1Q96S99 279 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 OMDQ99983 421 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 ERVK-6Q9BXR3 956 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 BEX2Q9BXY8 128 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 LHX5Q9H2C1 402 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 LRRN3Q9H3W5 708 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 SLC38A10Q9HBR0 1119 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 MEPEQ9NQ76 525 aaPredicted RBP2.11□□□□□ -2.07
CLK1-204ENST00000432425 OR2S2Q9NQN1 319 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 POLE4Q9NR33 117 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 INIPQ9NRY2 104 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 SAMSN1Q9NSI8 373 aaKnown RBP2.11□□□□□ -2.07
CLK1-204ENST00000432425 ENOPH1Q9UHY7 261 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 RAB26Q9ULW5 256 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 TBL2Q9Y4P3 447 aaKnown RBP2.11□□□□□ -2.07
CLK1-204ENST00000432425 TSSC4Q9Y5U2 329 aaPredicted RBP2.11□□□□□ -2.07
CLK1-204ENST00000432425 TAF1LQ8IZX4 1826 aa2.11□□□□□ -2.07
CLK1-204ENST00000432425 IGKV6-21A0A0C4DH24 114 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 A0A1W2PPV9 198 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 LRRC30A6NM36 301 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 DHRS7CA6NNS2 312 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 NPIPA7E9PJI5 369 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 H3BMH7 237 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 MKRN2OSH3BPM6 223 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 M0QXV9 152 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 DYNC1I1O14576 645 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 IMPA2O14732 288 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 LIN7AO14910 233 aaPredicted RBP2.1□□□□□ -2.07
CLK1-204ENST00000432425 STX10O60499 249 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 GMDSO60547 372 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 LYPLA1O75608 230 aaPredicted RBP2.1□□□□□ -2.07
CLK1-204ENST00000432425 ANP32DO95626 131 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 TSPAN12O95859 305 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 HPNP05981 417 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 TFPTP0C1Z6 253 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 NPIPA8P0DM63 369 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 TSPAN8P19075 237 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 RAB4AP20338 218 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 PSMB5P28074 263 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 UQCRFS1P47985 274 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 CEBPGP53567 150 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 SPCS3P61009 180 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 ATP6V0D1P61421 351 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 TIMM10P62072 90 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 OC90Q02509 493 aaPredicted RBP2.1□□□□□ -2.07
CLK1-204ENST00000432425 MGAT3Q09327 533 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 C1orf61Q13536 156 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 PSG3Q16557 428 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 SYPL1Q16563 259 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 CYP51A1Q16850 503 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 C5orf64Q2M2E5 130 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 ZCWPW2Q504Y3 356 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 C5orf47Q569G3 176 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 YIF1BQ5BJH7 314 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 ZNF57Q68EA5 555 aaPredicted RBP2.1□□□□□ -2.07
CLK1-204ENST00000432425 TIGD3Q6B0B8 471 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 TMEM107Q6UX40 140 aa2.1□□□□□ -2.07
CLK1-204ENST00000432425 PLEKHG7Q6ZR37 379 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms