RNA–Protein interactions for RNA: ENST00000429629.6

GARNL3-204, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 5

Gene GARNL3, Length 694 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-204ENST00000429629 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.06□□□□□ -0.32
GARNL3-204ENST00000429629 PTGES3Q15185 160 aaKnown RBP13.06□□□□□ -0.32
GARNL3-204ENST00000429629 SLC36A2Q495M3 483 aa13.06□□□□□ -0.32
GARNL3-204ENST00000429629 SLC35F1Q5T1Q4 408 aa13.06□□□□□ -0.32
GARNL3-204ENST00000429629 NCMAPQ5T1S8 102 aa13.06□□□□□ -0.32
GARNL3-204ENST00000429629 ACSM5Q6NUN0 579 aa13.06□□□□□ -0.32
GARNL3-204ENST00000429629 LEG1Q6P5S2 330 aa13.06□□□□□ -0.32
GARNL3-204ENST00000429629 TMEM108Q6UXF1 575 aa13.06□□□□□ -0.32
GARNL3-204ENST00000429629 ZBTB49Q6ZSB9 765 aa13.06□□□□□ -0.32
GARNL3-204ENST00000429629 SKA3Q8IX90 412 aa13.06□□□□□ -0.32
GARNL3-204ENST00000429629 OR6V1Q8N148 313 aa13.06□□□□□ -0.32
GARNL3-204ENST00000429629 OR52E2Q8NGJ4 325 aa13.06□□□□□ -0.32
GARNL3-204ENST00000429629 OR2T4Q8NH00 348 aa13.06□□□□□ -0.32
GARNL3-204ENST00000429629 OR52N5Q8NH56 324 aa13.06□□□□□ -0.32
GARNL3-204ENST00000429629 NABP1Q96AH0 204 aa13.06□□□□□ -0.32
GARNL3-204ENST00000429629 RDH12Q96NR8 316 aa13.06□□□□□ -0.32
GARNL3-204ENST00000429629 CIB1Q99828 191 aa13.06□□□□□ -0.32
GARNL3-204ENST00000429629 TMEM204Q9BSN7 226 aa13.06□□□□□ -0.32
GARNL3-204ENST00000429629 GABARAPL3Q9BY60 117 aa13.06□□□□□ -0.32
GARNL3-204ENST00000429629 PRRG3Q9BZD7 231 aa13.06□□□□□ -0.32
GARNL3-204ENST00000429629 NMNAT2Q9BZQ4 307 aa13.06□□□□□ -0.32
GARNL3-204ENST00000429629 NUAK2Q9H093 628 aa13.06□□□□□ -0.32
GARNL3-204ENST00000429629 KCNN2Q9H2S1 579 aa13.06□□□□□ -0.32
GARNL3-204ENST00000429629 FN3KQ9H479 309 aa13.06□□□□□ -0.32
GARNL3-204ENST00000429629 HCFC1P51610 2035 aa13.05□□□□□ -0.32
GARNL3-204ENST00000429629 IGLV1-36A0A0B4J1U3 117 aa13.05□□□□□ -0.32
GARNL3-204ENST00000429629 ZAR1LA6NP61 321 aa13.05□□□□□ -0.32
GARNL3-204ENST00000429629 CST2P09228 141 aa13.05□□□□□ -0.32
GARNL3-204ENST00000429629 B4GALT1P15291 398 aa13.05□□□□□ -0.32
GARNL3-204ENST00000429629 ZNF3P17036 446 aa13.05□□□□□ -0.32
GARNL3-204ENST00000429629 POU1F1P28069 291 aa13.05□□□□□ -0.32
GARNL3-204ENST00000429629 LOXP28300 417 aaPredicted RBP13.05□□□□□ -0.32
GARNL3-204ENST00000429629 PCBD1P61457 104 aa13.05□□□□□ -0.32
GARNL3-204ENST00000429629 EFNB1P98172 346 aa13.05□□□□□ -0.32
GARNL3-204ENST00000429629 GLO1Q04760 184 aa13.05□□□□□ -0.32
GARNL3-204ENST00000429629 FMODQ06828 376 aa13.05□□□□□ -0.32
GARNL3-204ENST00000429629 NPRL3Q12980 569 aa13.05□□□□□ -0.32
GARNL3-204ENST00000429629 ADAM5Q6NVV9 412 aa13.05□□□□□ -0.32
GARNL3-204ENST00000429629 WFDC8Q8IUA0 241 aa13.05□□□□□ -0.32
GARNL3-204ENST00000429629 CBR4Q8N4T8 237 aa13.05□□□□□ -0.32
GARNL3-204ENST00000429629 PACRGLQ8N7B6 248 aa13.05□□□□□ -0.32
GARNL3-204ENST00000429629 SLC37A3Q8NCC5 494 aa13.05□□□□□ -0.32
GARNL3-204ENST00000429629 EME1Q96AY2 570 aa13.05□□□□□ -0.32
GARNL3-204ENST00000429629 ZNF75AQ96N20 296 aa13.05□□□□□ -0.32
GARNL3-204ENST00000429629 POLE4Q9NR33 117 aa13.05□□□□□ -0.32
GARNL3-204ENST00000429629 ZNF224Q9NZL3 707 aa13.05□□□□□ -0.32
GARNL3-204ENST00000429629 ORC6Q9Y5N6 252 aa13.05□□□□□ -0.32
GARNL3-204ENST00000429629 UNC79Q9P2D8 2635 aa13.05□□□□□ -0.32
GARNL3-204ENST00000429629 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.04□□□□□ -0.32
GARNL3-204ENST00000429629 DPRXA6NFQ7 191 aa13.04□□□□□ -0.32
GARNL3-204ENST00000429629 C12orf71A8MTZ7 269 aa13.04□□□□□ -0.32
GARNL3-204ENST00000429629 E9PQ18 207 aa13.04□□□□□ -0.32
GARNL3-204ENST00000429629 CASQ2O14958 399 aaPredicted RBP13.04□□□□□ -0.32
GARNL3-204ENST00000429629 SURF4O15260 269 aa13.04□□□□□ -0.32
GARNL3-204ENST00000429629 PTHP01270 115 aa13.04□□□□□ -0.32
GARNL3-204ENST00000429629 MSR1P21757 451 aa13.04□□□□□ -0.32
GARNL3-204ENST00000429629 PAICSP22234 425 aaKnown RBP13.04□□□□□ -0.32
GARNL3-204ENST00000429629 HSF2Q03933 536 aa13.04□□□□□ -0.32
GARNL3-204ENST00000429629 TLE4Q04727 773 aa13.04□□□□□ -0.32
GARNL3-204ENST00000429629 RCN1Q15293 331 aa13.04□□□□□ -0.32
GARNL3-204ENST00000429629 GSG1Q2KHT4 349 aa13.04□□□□□ -0.32
GARNL3-204ENST00000429629 SLX4IPQ5VYV7 408 aa13.04□□□□□ -0.32
GARNL3-204ENST00000429629 ZNF787Q6DD87 383 aa13.04□□□□□ -0.32
GARNL3-204ENST00000429629 SDR9C7Q8NEX9 313 aa13.04□□□□□ -0.32
GARNL3-204ENST00000429629 NSMAFQ92636 917 aa13.04□□□□□ -0.32
GARNL3-204ENST00000429629 PTP4A1Q93096 173 aa13.04□□□□□ -0.32
GARNL3-204ENST00000429629 ZC3HAV1LQ96H79 300 aaKnown RBP13.04□□□□□ -0.32
GARNL3-204ENST00000429629 SLC38A2Q96QD8 506 aa13.04□□□□□ -0.32
GARNL3-204ENST00000429629 C1orf198Q9H425 327 aa13.04□□□□□ -0.32
GARNL3-204ENST00000429629 KCNG2Q9UJ96 466 aa13.04□□□□□ -0.32
GARNL3-204ENST00000429629 MOKQ9UQ07 419 aa13.04□□□□□ -0.32
GARNL3-204ENST00000429629 COA3Q9Y2R0 106 aaPredicted RBP13.04□□□□□ -0.32
GARNL3-204ENST00000429629 FREM1Q5H8C1 2179 aa13.04□□□□□ -0.32
GARNL3-204ENST00000429629 H7C1C5 153 aa13.03□□□□□ -0.32
GARNL3-204ENST00000429629 EI24O14681 340 aa13.03□□□□□ -0.32
GARNL3-204ENST00000429629 SIAH2O43255 324 aa13.03□□□□□ -0.32
GARNL3-204ENST00000429629 RRP9O43818 475 aaKnown RBP13.03□□□□□ -0.32
GARNL3-204ENST00000429629 MITFO75030 526 aaPredicted RBP13.03□□□□□ -0.32
GARNL3-204ENST00000429629 SERPINA5P05154 406 aa13.03□□□□□ -0.32
GARNL3-204ENST00000429629 MMP7P09237 267 aaPredicted RBP13.03□□□□□ -0.32
GARNL3-204ENST00000429629 CD40P25942 277 aa13.03□□□□□ -0.32
GARNL3-204ENST00000429629 LCN6P62502 163 aa13.03□□□□□ -0.32
GARNL3-204ENST00000429629 RAB1AP62820 205 aa13.03□□□□□ -0.32
GARNL3-204ENST00000429629 CRMP1Q14194 572 aa13.03□□□□□ -0.32
GARNL3-204ENST00000429629 ETFDHQ16134 617 aa13.03□□□□□ -0.32
GARNL3-204ENST00000429629 SGCAQ16586 387 aa13.03□□□□□ -0.32
GARNL3-204ENST00000429629 C12orf73Q69YU5 71 aa13.03□□□□□ -0.32
GARNL3-204ENST00000429629 TMEM53Q6P2H8 277 aa13.03□□□□□ -0.32
GARNL3-204ENST00000429629 SLC16A14Q7RTX9 510 aa13.03□□□□□ -0.32
GARNL3-204ENST00000429629 TRUB1Q8WWH5 349 aaKnown RBP13.03□□□□□ -0.32
GARNL3-204ENST00000429629 PLPPR2Q96GM1 343 aa13.03□□□□□ -0.32
GARNL3-204ENST00000429629 GRIP2Q9C0E4 1043 aa13.03□□□□□ -0.32
GARNL3-204ENST00000429629 SEC61A2Q9H9S3 476 aa13.03□□□□□ -0.32
GARNL3-204ENST00000429629 SRA1Q9HD15 236 aaKnown RBP13.03□□□□□ -0.32
GARNL3-204ENST00000429629 RPRD1BQ9NQG5 326 aaKnown RBP13.03□□□□□ -0.32
GARNL3-204ENST00000429629 NPAP1Q9NZP6 1156 aa13.03□□□□□ -0.32
GARNL3-204ENST00000429629 TIMM10BQ9Y5J6 103 aa13.03□□□□□ -0.32
GARNL3-204ENST00000429629 DCTN6O00399 190 aa13.02□□□□□ -0.33
GARNL3-204ENST00000429629 HLA-HP01893 362 aa13.02□□□□□ -0.33
GARNL3-204ENST00000429629 CD3EP07766 207 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms