RNA–Protein interactions for RNA: ENST00000429490.5

SGMS1-203, Transcript of sphingomyelin synthase 1, humanhuman

TSL 5 BASIC

Gene SGMS1, Length 3,634 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGMS1-203ENST00000429490 CALCBP10092 127 aa12.5□□□□□ -0.41
SGMS1-203ENST00000429490 HNRNPA2B1P22626 353 aaKnown RBP12.5□□□□□ -0.41
SGMS1-203ENST00000429490 SLC6A9P48067 706 aa12.5□□□□□ -0.41
SGMS1-203ENST00000429490 PLCXD2Q0VAA5 305 aa12.5□□□□□ -0.41
SGMS1-203ENST00000429490 PLA2G7Q13093 441 aa12.5□□□□□ -0.41
SGMS1-203ENST00000429490 NFATC4Q14934 902 aa12.5□□□□□ -0.41
SGMS1-203ENST00000429490 FAM199XQ6PEV8 388 aaPredicted RBP12.5□□□□□ -0.41
SGMS1-203ENST00000429490 DGAT2L6Q6ZPD8 337 aa12.5□□□□□ -0.41
SGMS1-203ENST00000429490 CDH26Q8IXH8 852 aa12.5□□□□□ -0.41
SGMS1-203ENST00000429490 TMED6Q8WW62 240 aa12.5□□□□□ -0.41
SGMS1-203ENST00000429490 ATOH1Q92858 354 aaPredicted RBP12.5□□□□□ -0.41
SGMS1-203ENST00000429490 WNT2BQ93097 391 aa12.5□□□□□ -0.41
SGMS1-203ENST00000429490 RPP25Q9BUL9 199 aaKnown RBP12.5□□□□□ -0.41
SGMS1-203ENST00000429490 EMC3Q9P0I2 261 aa12.5□□□□□ -0.41
SGMS1-203ENST00000429490 COPS7AQ9UBW8 275 aa12.5□□□□□ -0.41
SGMS1-203ENST00000429490 DTX4Q9Y2E6 619 aa12.5□□□□□ -0.41
SGMS1-203ENST00000429490 RPS10-NUDT3A0A1W2PQS6 291 aa12.5□□□□□ -0.41
SGMS1-203ENST00000429490 ZNF264O43296 627 aa12.5□□□□□ -0.41
SGMS1-203ENST00000429490 GALR3O60755 368 aaPredicted RBP12.5□□□□□ -0.41
SGMS1-203ENST00000429490 AKR7A3O95154 331 aa12.5□□□□□ -0.41
SGMS1-203ENST00000429490 ITGA5P08648 1049 aa12.5□□□□□ -0.41
SGMS1-203ENST00000429490 GABRA1P14867 456 aa12.5□□□□□ -0.41
SGMS1-203ENST00000429490 HSD11B1P28845 292 aa12.5□□□□□ -0.41
SGMS1-203ENST00000429490 TRAPPC6BQ86SZ2 158 aa12.5□□□□□ -0.41
SGMS1-203ENST00000429490 NPEPL1Q8NDH3 523 aa12.5□□□□□ -0.41
SGMS1-203ENST00000429490 OR13C9Q8NGT0 318 aa12.5□□□□□ -0.41
SGMS1-203ENST00000429490 PPP1R1CQ8WVI7 109 aa12.5□□□□□ -0.41
SGMS1-203ENST00000429490 SLC41A2Q96JW4 573 aa12.5□□□□□ -0.41
SGMS1-203ENST00000429490 C10orf90Q96M02 699 aa12.5□□□□□ -0.41
SGMS1-203ENST00000429490 MRI1Q9BV20 369 aa12.5□□□□□ -0.41
SGMS1-203ENST00000429490 HEXA-AS1Q9H8Q6 139 aa12.5□□□□□ -0.41
SGMS1-203ENST00000429490 UBQLN4Q9NRR5 601 aa12.5□□□□□ -0.41
SGMS1-203ENST00000429490 FRRS1LQ9P0K9 344 aa12.5□□□□□ -0.41
SGMS1-203ENST00000429490 CYP8B1Q9UNU6 501 aa12.5□□□□□ -0.41
SGMS1-203ENST00000429490 SNRPGP15A8MWD9 76 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 ZNF208O43345 1280 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 HOXB5P09067 269 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 PNMTP11086 282 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 SLC2A1P11166 492 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 TOMM20Q15388 145 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 AWAT2Q6E213 333 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 OR52W1Q6IF63 320 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 MDGA2Q7Z553 956 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 PXKQ7Z7A4 578 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 TMEM151BQ8IW70 566 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 OR5D18Q8NGL1 313 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 RLN3Q8WXF3 142 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 CMBLQ96DG6 245 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 FAM71F1Q96KD3 344 aaPredicted RBP12.49□□□□□ -0.41
SGMS1-203ENST00000429490 TCEAL2Q9H3H9 227 aaPredicted RBP12.49□□□□□ -0.41
SGMS1-203ENST00000429490 EVA1AQ9H8M9 152 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 KLHDC2Q9Y2U9 406 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 TRPM7Q96QT4 1865 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 CXorf51AA0A1B0GTR3 108 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 P2RY10O00398 339 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 DCTN6O00399 190 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 CBR1P16152 277 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 EPHA4P54764 986 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 H2BFSP57053 126 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 PSG6Q00889 435 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 PRICKLE4Q2TBC4 344 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 MAMDC2Q7Z304 686 aaPredicted RBP12.49□□□□□ -0.41
SGMS1-203ENST00000429490 CA13Q8N1Q1 262 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 PHYHIPQ92561 330 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 KTI12Q96EK9 354 aaPredicted RBP12.49□□□□□ -0.41
SGMS1-203ENST00000429490 FAM83CQ9BQN1 747 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 ADAT1Q9BUB4 502 aaKnown RBP12.49□□□□□ -0.41
SGMS1-203ENST00000429490 ST6GALNAC5Q9BVH7 336 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 NKX6-2Q9C056 277 aaPredicted RBP12.49□□□□□ -0.41
SGMS1-203ENST00000429490 OR11A1Q9GZK7 315 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 ZNF701Q9NV72 531 aaPredicted RBP12.49□□□□□ -0.41
SGMS1-203ENST00000429490 MRM2Q9UI43 246 aaKnown RBP12.49□□□□□ -0.41
SGMS1-203ENST00000429490 MSRAQ9UJ68 235 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 HHLA2Q9UM44 414 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 ETV7Q9Y603 341 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 LOC100289279A0A1B0GTE1 492 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 TCRBV21S2A2A0A5A6 115 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 H7C417 338 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 XRCC3O43542 346 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 ERGP11308 486 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 RAB38P57729 211 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 ZP2Q05996 745 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 SMCO1Q147U7 214 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 NSDHLQ15738 373 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 C2orf68Q2NKX9 166 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 C1QL3Q5VWW1 255 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 LRRTM1Q86UE6 522 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 BCORP1Q8N888 145 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 LHFPL5Q8TAF8 219 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 CCDC74AQ96AQ1 378 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 FOXRED1Q96CU9 486 aaPredicted RBP12.49□□□□□ -0.41
SGMS1-203ENST00000429490 LPAR4Q99677 370 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 MAP3K3Q99759 626 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 MTFP1Q9UDX5 166 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 SLC17A4Q9Y2C5 497 aa12.49□□□□□ -0.41
SGMS1-203ENST00000429490 KLF4O43474 513 aa12.48□□□□□ -0.41
SGMS1-203ENST00000429490 ADAM11O75078 769 aa12.48□□□□□ -0.41
SGMS1-203ENST00000429490 RPS27AP62979 156 aaKnown RBP12.48□□□□□ -0.41
SGMS1-203ENST00000429490 UBA52P62987 128 aaKnown RBP12.48□□□□□ -0.41
SGMS1-203ENST00000429490 EID2Q8N6I1 236 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms