RNA–Protein interactions for RNA: ENST00000428445.1

VARS-216, Transcript of valyl-tRNA synthetase, humanhuman

TSL 5

Gene VARS, Length 863 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-216ENST00000428445 RETREG3Q86VR2 466 aa14.05□□□□□ -0.16
VARS-216ENST00000428445 ZNF101Q8IZC7 436 aa14.05□□□□□ -0.16
VARS-216ENST00000428445 AKR7LQ8NHP1 331 aa14.05□□□□□ -0.16
VARS-216ENST00000428445 PFN4Q8NHR9 129 aa14.05□□□□□ -0.16
VARS-216ENST00000428445 HIST1H2ACQ93077 130 aa14.05□□□□□ -0.16
VARS-216ENST00000428445 TAMM41Q96BW9 452 aa14.05□□□□□ -0.16
VARS-216ENST00000428445 DUX5Q96PT3 197 aa14.05□□□□□ -0.16
VARS-216ENST00000428445 DCAF16Q9NXF7 216 aa14.05□□□□□ -0.16
VARS-216ENST00000428445 NKIRAS2Q9NYR9 191 aa14.05□□□□□ -0.16
VARS-216ENST00000428445 ZNF229Q9UJW7 825 aa14.05□□□□□ -0.16
VARS-216ENST00000428445 TRIM33Q9UPN9 1127 aa14.05□□□□□ -0.16
VARS-216ENST00000428445 NDUFAF1Q9Y375 327 aa14.05□□□□□ -0.16
VARS-216ENST00000428445 PPIAL4AQ9Y536 164 aa14.05□□□□□ -0.16
VARS-216ENST00000428445 LOC100509620A0A075B734 347 aa14.04□□□□□ -0.16
VARS-216ENST00000428445 A0A0G2JMP0 313 aa14.04□□□□□ -0.16
VARS-216ENST00000428445 A0A0X1KG70 313 aa14.04□□□□□ -0.16
VARS-216ENST00000428445 TRAPPC13A5PLN9 417 aa14.04□□□□□ -0.16
VARS-216ENST00000428445 CENPBD1B2RD01 187 aa14.04□□□□□ -0.16
VARS-216ENST00000428445 CLDN25C9JDP6 229 aa14.04□□□□□ -0.16
VARS-216ENST00000428445 SNAP29O95721 258 aa14.04□□□□□ -0.16
VARS-216ENST00000428445 IGHG1P01857 330 aa14.04□□□□□ -0.16
VARS-216ENST00000428445 FUT1P19526 365 aa14.04□□□□□ -0.16
VARS-216ENST00000428445 DRD4P21917 467 aa14.04□□□□□ -0.16
VARS-216ENST00000428445 APLNRP35414 380 aa14.04□□□□□ -0.16
VARS-216ENST00000428445 AQP2P41181 271 aa14.04□□□□□ -0.16
VARS-216ENST00000428445 ZNF81P51508 661 aa14.04□□□□□ -0.16
VARS-216ENST00000428445 HSF2Q03933 536 aa14.04□□□□□ -0.16
VARS-216ENST00000428445 PLP2Q04941 152 aa14.04□□□□□ -0.16
VARS-216ENST00000428445 FMODQ06828 376 aa14.04□□□□□ -0.16
VARS-216ENST00000428445 MOGQ16653 247 aa14.04□□□□□ -0.16
VARS-216ENST00000428445 HFEQ30201 348 aa14.04□□□□□ -0.16
VARS-216ENST00000428445 PCGF3Q3KNV8 242 aa14.04□□□□□ -0.16
VARS-216ENST00000428445 INTS11Q5TA45 600 aaKnown RBP14.04□□□□□ -0.16
VARS-216ENST00000428445 NKAIN4Q8IVV8 208 aa14.04□□□□□ -0.16
VARS-216ENST00000428445 OR4M2Q8NGB6 313 aa14.04□□□□□ -0.16
VARS-216ENST00000428445 MOSPD2Q8NHP6 518 aa14.04□□□□□ -0.16
VARS-216ENST00000428445 ASB10Q8WXI3 467 aa14.04□□□□□ -0.16
VARS-216ENST00000428445 NSMAFQ92636 917 aa14.04□□□□□ -0.16
VARS-216ENST00000428445 TAF15Q92804 592 aaKnown RBP eCLIP14.04□□□□□ -0.16
VARS-216ENST00000428445 RAB39BQ96DA2 213 aa14.04□□□□□ -0.16
VARS-216ENST00000428445 RBM4Q9BWF3 364 aaKnown RBP14.04□□□□□ -0.16
VARS-216ENST00000428445 MRPL13Q9BYD1 178 aaKnown RBP14.04□□□□□ -0.16
VARS-216ENST00000428445 BCL2L14Q9BZR8 327 aa14.04□□□□□ -0.16
VARS-216ENST00000428445 PCDHAC1Q9H158 963 aa14.04□□□□□ -0.16
VARS-216ENST00000428445 C7orf69Q9H7B7 122 aa14.04□□□□□ -0.16
VARS-216ENST00000428445 SAP30LQ9HAJ7 183 aa14.04□□□□□ -0.16
VARS-216ENST00000428445 UBAP1Q9NZ09 502 aa14.04□□□□□ -0.16
VARS-216ENST00000428445 PCDHGB1Q9Y5G3 927 aa14.04□□□□□ -0.16
VARS-216ENST00000428445 TRRAPQ9Y4A5 3859 aa14.04□□□□□ -0.16
VARS-216ENST00000428445 MEGF8Q7Z7M0 2845 aa14.03□□□□□ -0.16
VARS-216ENST00000428445 ISPDA4D126 451 aa14.03□□□□□ -0.16
VARS-216ENST00000428445 ZSCAN5BA6NJL1 495 aa14.03□□□□□ -0.16
VARS-216ENST00000428445 IGF2P01344 180 aa14.03□□□□□ -0.16
VARS-216ENST00000428445 IGHV3-13P01766 116 aa14.03□□□□□ -0.16
VARS-216ENST00000428445 ACADSP16219 412 aa14.03□□□□□ -0.16
VARS-216ENST00000428445 ZNF32P17041 273 aa14.03□□□□□ -0.16
VARS-216ENST00000428445 ZFP36P26651 326 aaKnown RBP14.03□□□□□ -0.16
VARS-216ENST00000428445 STOMP27105 288 aa14.03□□□□□ -0.16
VARS-216ENST00000428445 MMP15P51511 669 aa14.03□□□□□ -0.16
VARS-216ENST00000428445 ZNF84P51523 738 aa14.03□□□□□ -0.16
VARS-216ENST00000428445 CRYBA2P53672 197 aa14.03□□□□□ -0.16
VARS-216ENST00000428445 UGT2B15P54855 530 aa14.03□□□□□ -0.16
VARS-216ENST00000428445 TEKQ02763 1124 aa14.03□□□□□ -0.16
VARS-216ENST00000428445 LAPTM4AQ15012 233 aa14.03□□□□□ -0.16
VARS-216ENST00000428445 SGCAQ16586 387 aa14.03□□□□□ -0.16
VARS-216ENST00000428445 NANOGNBQ7Z5D8 188 aa14.03□□□□□ -0.16
VARS-216ENST00000428445 DHDDSQ86SQ9 333 aa14.03□□□□□ -0.16
VARS-216ENST00000428445 TEX29Q8N6K0 151 aa14.03□□□□□ -0.16
VARS-216ENST00000428445 CLDN22Q8N7P3 220 aa14.03□□□□□ -0.16
VARS-216ENST00000428445 NOXO1Q8NFA2 376 aa14.03□□□□□ -0.16
VARS-216ENST00000428445 OR1J2Q8NGS2 313 aa14.03□□□□□ -0.16
VARS-216ENST00000428445 NANPQ8TBE9 248 aa14.03□□□□□ -0.16
VARS-216ENST00000428445 SLC25A40Q8TBP6 338 aa14.03□□□□□ -0.16
VARS-216ENST00000428445 IPCEF1Q8WWN9 437 aaPredicted RBP14.03□□□□□ -0.16
VARS-216ENST00000428445 GEMIN6Q8WXD5 167 aaKnown RBP14.03□□□□□ -0.16
VARS-216ENST00000428445 HDAC2Q92769 488 aaKnown RBP14.03□□□□□ -0.16
VARS-216ENST00000428445 CGREF1Q99674 301 aa14.03□□□□□ -0.16
VARS-216ENST00000428445 GAL3ST1Q99999 423 aa14.03□□□□□ -0.16
VARS-216ENST00000428445 ZNF426Q9BUY5 554 aa14.03□□□□□ -0.16
VARS-216ENST00000428445 SUCNR1Q9BXA5 334 aa14.03□□□□□ -0.16
VARS-216ENST00000428445 C20orf141Q9NUB4 165 aa14.03□□□□□ -0.16
VARS-216ENST00000428445 UGT2A1Q9Y4X1 527 aa14.03□□□□□ -0.16
VARS-216ENST00000428445 PKD1L1Q8TDX9 2849 aa14.03□□□□□ -0.16
VARS-216ENST00000428445 C5orf49A4QMS7 147 aa14.02□□□□□ -0.17
VARS-216ENST00000428445 MCIDASD6RGH6 385 aa14.02□□□□□ -0.17
VARS-216ENST00000428445 UBOX5O94941 541 aa14.02□□□□□ -0.17
VARS-216ENST00000428445 PRSS23O95084 383 aa14.02□□□□□ -0.17
VARS-216ENST00000428445 NGFP01138 241 aa14.02□□□□□ -0.17
VARS-216ENST00000428445 ERVK-25P63136 954 aa14.02□□□□□ -0.17
VARS-216ENST00000428445 PSG4Q00888 419 aa14.02□□□□□ -0.17
VARS-216ENST00000428445 METTL21CQ5VZV1 264 aa14.02□□□□□ -0.17
VARS-216ENST00000428445 HDDC2Q7Z4H3 204 aa14.02□□□□□ -0.17
VARS-216ENST00000428445 BPIFB2Q8N4F0 458 aa14.02□□□□□ -0.17
VARS-216ENST00000428445 OR10A6Q8NH74 314 aa14.02□□□□□ -0.17
VARS-216ENST00000428445 SGMS2Q8NHU3 365 aa14.02□□□□□ -0.17
VARS-216ENST00000428445 TMEM255BQ8WV15 326 aa14.02□□□□□ -0.17
VARS-216ENST00000428445 RAB1CQ92928 201 aa14.02□□□□□ -0.17
VARS-216ENST00000428445 NABP1Q96AH0 204 aa14.02□□□□□ -0.17
VARS-216ENST00000428445 MARS2Q96GW9 593 aaKnown RBP14.02□□□□□ -0.17
VARS-216ENST00000428445 POM121L2Q96KW2 1035 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms