RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 CLDN6P56747 220 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 PEA15Q15121 130 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 RGNQ15493 299 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 OR1C1Q15619 314 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 ZNF404Q494X3 552 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 FOXB2Q5VYV0 432 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 ZNF529Q6P280 563 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 ZNF322Q6U7Q0 402 aaPredicted RBP5.27□□□□□ -1.57
HERC4-206ENST00000427635 RANBP10Q6VN20 620 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 MED25Q71SY5 747 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 MARCH3Q86UD3 253 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 LSRQ86X29 649 aaPredicted RBP5.27□□□□□ -1.57
HERC4-206ENST00000427635 PTOV1Q86YD1 416 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 SLC35F3Q8IY50 421 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 TTC9BQ8N6N2 239 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 OR1M1Q8NGA1 313 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 SLC35B2Q8TB61 432 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 APIPQ96GX9 242 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 SELENOIQ9C0D9 397 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 MRPS28Q9Y2Q9 187 aaKnown RBP5.27□□□□□ -1.57
HERC4-206ENST00000427635 A0A0D9SG52 128 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 C5orf49A4QMS7 147 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 NAP1L6A6NFF2 107 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 FAM72CH0Y354 149 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 MS4A18H0YCH9 400 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 F2RL2O00254 374 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 P2RX6O15547 441 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 GFRA3O60609 400 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 CD82P27701 267 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 SSTR4P31391 388 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 AQP4P55087 323 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 MS4A18Q3C1V0 323 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 FAM72AQ5TYM5 149 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 FAM72DQ6L9T8 149 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 DHRS13Q6UX07 377 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 ZNF788Q6ZQV5 615 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 FAM72BQ86X60 149 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 CPNE8Q86YQ8 564 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 CLECL1Q8IZS7 167 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 FITM2Q8N6M3 262 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 NEIL2Q969S2 332 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 CDX2Q99626 313 aaPredicted RBP5.27□□□□□ -1.57
HERC4-206ENST00000427635 P4HTMQ9NXG6 502 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 WNT16Q9UBV4 365 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 CACFD1Q9UGQ2 172 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 OR51B4Q9Y5P0 310 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 MROH6A6NGR9 719 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 CBY3A6NI87 242 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 ZNF716A6NP11 495 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 LINC01387J3KSC0 135 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 NUPL2O15504 423 aaKnown RBP5.27□□□□□ -1.57
HERC4-206ENST00000427635 CTNSO60931 367 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 MT-ND4P03905 459 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 STSP08842 583 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 FAM157BP0CG42 384 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 AVPR2P30518 371 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 BRS3P32247 399 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 PSMB10P40306 273 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 TAS2R45P59539 299 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 RABL3Q5HYI8 236 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 LILRA6Q6PI73 481 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 TRILQ7L0X0 811 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 TMEM139Q8IV31 216 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 OR4K5Q8NGD3 323 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 RPEQ96AT9 228 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 PINX1Q96BK5 328 aaKnown RBP5.27□□□□□ -1.57
HERC4-206ENST00000427635 C3orf30Q96M34 536 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 FAM173AQ9BQD7 235 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 OPN3Q9H1Y3 402 aaPredicted RBP5.27□□□□□ -1.57
HERC4-206ENST00000427635 GAL3ST2Q9H3Q3 398 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 TMEM181Q9P2C4 612 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 MSRB2Q9Y3D2 182 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 PCYT1BQ9Y5K3 369 aaPredicted RBP5.27□□□□□ -1.57
HERC4-206ENST00000427635 PUS1Q9Y606 427 aaKnown RBP eCLIP5.27□□□□□ -1.57
HERC4-206ENST00000427635 COL3A1P02461 1466 aaPredicted RBP5.27□□□□□ -1.57
HERC4-206ENST00000427635 CDHR4A6H8M9 788 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 OR8G3PP0DMU2 310 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 BCL6P41182 706 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 P2RX3P56373 397 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 PAFAH1B2P68402 229 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 DUSP2Q05923 314 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 ELAVL1Q15717 326 aaKnown RBP5.27□□□□□ -1.57
HERC4-206ENST00000427635 VMA21Q3ZAQ7 101 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 COX20Q5RI15 118 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 HES3Q5TGS1 186 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 ETV3LQ6ZN32 361 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 RFPL4BQ6ZWI9 263 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 OR52N5Q8NH56 324 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 ARL11Q969Q4 196 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 NSUN5Q96P11 429 aaKnown RBP5.27□□□□□ -1.57
HERC4-206ENST00000427635 BIN3Q9NQY0 253 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 SMOXQ9NWM0 555 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 GPR45Q9Y5Y3 372 aa5.27□□□□□ -1.57
HERC4-206ENST00000427635 ARHGEF28Q8N1W1 1705 aaKnown RBP5.27□□□□□ -1.57
HERC4-206ENST00000427635 TMEM212A6NML5 194 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 AIFM1O95831 613 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 PIPP12273 146 aaPredicted RBP5.26□□□□□ -1.57
HERC4-206ENST00000427635 PSMB5P28074 263 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 ADPRHP54922 357 aa5.26□□□□□ -1.57
HERC4-206ENST00000427635 MRPS10P82664 201 aaKnown RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 113.9 ms