RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 STMN3Q9NZ72 180 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 CNIH4Q9P003 139 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 STX18Q9P2W9 335 aaKnown RBP4.83□□□□□ -1.64
C9orf3-205ENST00000427193 SEC14L3Q9UDX4 400 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 MRTO4Q9UKD2 239 aaKnown RBP4.83□□□□□ -1.64
C9orf3-205ENST00000427193 SLC35A3Q9Y2D2 325 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 OR10H1Q9Y4A9 318 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 AP4S1Q9Y587 144 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 ENPP4Q9Y6X5 453 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 EXPH5Q8NEV8 1989 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 CPAMD8Q8IZJ3 1885 aa4.83□□□□□ -1.64
C9orf3-205ENST00000427193 MED12Q93074 2177 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 HEATR5AQ86XA9 2040 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 TNRC6AQ8NDV7 1962 aaKnown RBP4.82□□□□□ -1.64
C9orf3-205ENST00000427193 IGKV1D-42A0A075B6H8 117 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 A0A0B4J2E0 115 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 A0A0G2JMM0 328 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 A0A1B0GX12 115 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 A0A1W2PPB8 328 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 A0A1W2PRQ8 180 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 A0A1W2PRS3 328 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 OR5H15A6NDH6 313 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 ANKUB1A6NFN9 424 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 ARGFXA6NJG6 315 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 KIR3DP1A8MWS1 328 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 C5orf58C9J3I9 102 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 DLGAP1O14490 977 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 NME2P1O60361 137 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 REM1O75628 298 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 CIB2O75838 187 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 SNX4O95219 450 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 OR5F1O95221 314 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 ZNF682O95780 498 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 ANGPTL1O95841 491 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 IGF2P01344 180 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 IL1AP01583 271 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 LINGO3P0C6S8 592 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 THRBP10828 461 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 CD99P14209 185 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 IL7RP16871 459 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 ZNF26P17031 533 aaPredicted RBP4.82□□□□□ -1.64
C9orf3-205ENST00000427193 ATP6V1C1P21283 382 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 SSTR2P30874 369 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 OR1E2P47887 323 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 CYB561P49447 251 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 TNFSF10P50591 281 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 HPCAP84074 193 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 ZNF117Q03924 483 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 DGCR6Q14129 220 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 GPR68Q15743 365 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 EIPR1Q53HC9 387 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 AGAP7PQ5VUJ5 663 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 TIGD3Q6B0B8 471 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 SLC30A6Q6NXT4 461 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 WDR88Q6ZMY6 472 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 RTL4Q6ZR62 310 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 Q6ZS92 163 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 TMEM179BQ7Z7N9 219 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 HMGN2P46Q86SG4 172 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 MARCH3Q86UD3 253 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 SPATA24Q86W54 205 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 EPHX4Q8IUS5 362 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 ZNF440Q8IYI8 595 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 C10orf67Q8IYJ2 551 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 OFCC1Q8IZS5 231 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 ZFP62Q8NB50 900 aaPredicted RBP4.82□□□□□ -1.64
C9orf3-205ENST00000427193 OR2M3Q8NG83 312 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 SVIPQ8NHG7 77 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 SLC7A13Q8TCU3 470 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 GPR119Q8TDV5 335 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 SLC26A7Q8TE54 656 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 PYDC1Q8WXC3 89 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 LZICQ8WZA0 190 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 FAM162AQ96A26 154 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 TMCO6Q96DC7 493 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 NRBF2Q96F24 287 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 CENPNQ96H22 339 aaPredicted RBP4.82□□□□□ -1.64
C9orf3-205ENST00000427193 AGAP4Q96P64 663 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 SIGLEC12Q96PQ1 595 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 BARD1Q99728 777 aaKnown RBP4.82□□□□□ -1.64
C9orf3-205ENST00000427193 PKP2Q99959 881 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 ARPC5LQ9BPX5 153 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 UGT2B28Q9BY64 529 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 MMP28Q9H239 520 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 ANKRD19PQ9H560 264 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 NMNAT1Q9HAN9 279 aaPredicted RBP4.82□□□□□ -1.64
C9orf3-205ENST00000427193 C12orf10Q9HB07 376 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 HHATLQ9HCP6 504 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 LRFN1Q9P244 771 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 DNAJB9Q9UBS3 223 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 TEKT2Q9UIF3 430 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 LRCH1Q9Y2L9 728 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 SH3GLB1Q9Y371 365 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 MRPS18CQ9Y3D5 142 aaKnown RBP4.82□□□□□ -1.64
C9orf3-205ENST00000427193 WIF1Q9Y5W5 379 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 LYVE1Q9Y5Y7 322 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 VPS13CQ709C8 3753 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 NINQ8N4C6 2090 aa4.82□□□□□ -1.64
C9orf3-205ENST00000427193 ALPK2Q86TB3 2170 aa4.81□□□□□ -1.64
C9orf3-205ENST00000427193 IGHV4OR15-8A0A075B7B6 117 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms