RNA–Protein interactions for RNA: ENST00000426539.1

GACAT3-201, gastric cancer associated transcript 3, humanhuman

TSL 3 BASIC

Gene GACAT3, Length 1,096 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT3-201ENST00000426539 LOC100509620A0A075B734 347 aa8.55□□□□□ -1.04
GACAT3-201ENST00000426539 CENPBD1B2RD01 187 aa8.55□□□□□ -1.04
GACAT3-201ENST00000426539 MGRN1O60291 552 aa8.55□□□□□ -1.04
GACAT3-201ENST00000426539 EDF1O60869 148 aaKnown RBP8.55□□□□□ -1.04
GACAT3-201ENST00000426539 ENTPD5O75356 428 aa8.55□□□□□ -1.04
GACAT3-201ENST00000426539 WNT5AP41221 380 aa8.55□□□□□ -1.04
GACAT3-201ENST00000426539 RBM34P42696 430 aaKnown RBP8.55□□□□□ -1.04
GACAT3-201ENST00000426539 CRYBB2P43320 205 aa8.55□□□□□ -1.04
GACAT3-201ENST00000426539 RAD52P43351 418 aa8.55□□□□□ -1.04
GACAT3-201ENST00000426539 MRPS34P82930 218 aaKnown RBP8.55□□□□□ -1.04
GACAT3-201ENST00000426539 MVKQ03426 396 aa8.55□□□□□ -1.04
GACAT3-201ENST00000426539 GLO1Q04760 184 aa8.55□□□□□ -1.04
GACAT3-201ENST00000426539 FMODQ06828 376 aa8.55□□□□□ -1.04
GACAT3-201ENST00000426539 HNRNPA0Q13151 305 aaKnown RBP8.55□□□□□ -1.04
GACAT3-201ENST00000426539 PIN1Q13526 163 aaPredicted RBP8.55□□□□□ -1.04
GACAT3-201ENST00000426539 TBC1D28Q2M2D7 210 aa8.55□□□□□ -1.04
GACAT3-201ENST00000426539 PABPC1L2AQ5JQF8 200 aa8.55□□□□□ -1.04
GACAT3-201ENST00000426539 INTS11Q5TA45 600 aaKnown RBP8.55□□□□□ -1.04
GACAT3-201ENST00000426539 ZNF101Q8IZC7 436 aa8.55□□□□□ -1.04
GACAT3-201ENST00000426539 OR51F2Q8NH61 342 aa8.55□□□□□ -1.04
GACAT3-201ENST00000426539 SLC26A7Q8TE54 656 aa8.55□□□□□ -1.04
GACAT3-201ENST00000426539 LIPHQ8WWY8 451 aa8.55□□□□□ -1.04
GACAT3-201ENST00000426539 C11orf40Q8WZ69 217 aa8.55□□□□□ -1.04
GACAT3-201ENST00000426539 SGTBQ96EQ0 304 aa8.55□□□□□ -1.04
GACAT3-201ENST00000426539 POM121L2Q96KW2 1035 aa8.55□□□□□ -1.04
GACAT3-201ENST00000426539 MAGEB18Q96M61 343 aa8.55□□□□□ -1.04
GACAT3-201ENST00000426539 C1orf198Q9H425 327 aa8.55□□□□□ -1.04
GACAT3-201ENST00000426539 ZNF665Q9H7R5 613 aa8.55□□□□□ -1.04
GACAT3-201ENST00000426539 INIPQ9NRY2 104 aa8.55□□□□□ -1.04
GACAT3-201ENST00000426539 SLCO1C1Q9NYB5 712 aa8.55□□□□□ -1.04
GACAT3-201ENST00000426539 RIMS3Q9UJD0 308 aa8.55□□□□□ -1.04
GACAT3-201ENST00000426539 SH3GLB1Q9Y371 365 aa8.55□□□□□ -1.04
GACAT3-201ENST00000426539 GRIP1Q9Y3R0 1128 aa8.55□□□□□ -1.04
GACAT3-201ENST00000426539 LOC105371242A0A075B767 164 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 A0A0A6YYJ9 748 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 TRAV20A0A0B4J274 112 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 IGHV1-69-2A0A0G2JMI3 117 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 A0A0G2JND7 137 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 IQCMA0A1B0GVH7 501 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 A0A1W2PRG6 482 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 MCIDASD6RGH6 385 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 PLPP2O43688 288 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 PIP5K1CO60331 668 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 RGS9O75916 674 aaPredicted RBP8.54□□□□□ -1.04
GACAT3-201ENST00000426539 OR5F1O95221 314 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 IGF2P01344 180 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 IGHV1-46P01743 117 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 IGHV3-13P01766 116 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 ZNF32P17041 273 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 CFPP27918 469 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 MPV17P39210 176 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 OR1E2P47887 323 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 DAP3P51398 398 aaKnown RBP8.54□□□□□ -1.04
GACAT3-201ENST00000426539 MMP15P51511 669 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 ZNF84P51523 738 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 TAS2R41P59536 307 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 SELENOVP59797 346 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 PCGF3Q3KNV8 242 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 SPRNQ5BIV9 151 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 SPATA46Q5T0L3 261 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 METTL21CQ5VZV1 264 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 ACSM5Q6NUN0 579 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 FAHD2BQ6P2I3 314 aaPredicted RBP8.54□□□□□ -1.04
GACAT3-201ENST00000426539 TMEM154Q6P9G4 183 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 SLC25A47Q6Q0C1 308 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 USP51Q70EK9 711 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 LINC00528Q8N1L1 170 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 CLDN22Q8N7P3 220 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 LRRC75AQ8NAA5 344 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 ICA1LQ8NDH6 482 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 OR1J2Q8NGS2 313 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 OR1J1Q8NGS3 322 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 AKR7LQ8NHP1 331 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 TMEM239Q8WW34 195 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 RASSF5Q8WWW0 418 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 NSMAFQ92636 917 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 LRRC58Q96CX6 371 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 FAHD2AQ96GK7 314 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 MARS2Q96GW9 593 aaKnown RBP8.54□□□□□ -1.04
GACAT3-201ENST00000426539 ZNF583Q96ND8 569 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 TMPRSS13Q9BYE2 586 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 BCL2L14Q9BZR8 327 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 SIAEQ9HAT2 523 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 GPR160Q9UJ42 338 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 WIPI2Q9Y4P8 454 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 NBEAL1Q6ZS30 2694 aa8.54□□□□□ -1.04
GACAT3-201ENST00000426539 ZSCAN5BA6NJL1 495 aa8.53□□□□□ -1.04
GACAT3-201ENST00000426539 NPIPB13A6NJU9 1138 aa8.53□□□□□ -1.04
GACAT3-201ENST00000426539 HMGB1P1B2RPK0 211 aaPredicted RBP8.53□□□□□ -1.04
GACAT3-201ENST00000426539 NPIPB4C9JG80 1138 aa8.53□□□□□ -1.04
GACAT3-201ENST00000426539 MPZL1O95297 269 aa8.53□□□□□ -1.04
GACAT3-201ENST00000426539 PNPP00491 289 aa8.53□□□□□ -1.04
GACAT3-201ENST00000426539 PTHP01270 115 aa8.53□□□□□ -1.04
GACAT3-201ENST00000426539 IGHV2-5P01817 119 aa8.53□□□□□ -1.04
GACAT3-201ENST00000426539 MAKP20794 623 aa8.53□□□□□ -1.04
GACAT3-201ENST00000426539 CCNOP22674 350 aa8.53□□□□□ -1.04
GACAT3-201ENST00000426539 STOMP27105 288 aa8.53□□□□□ -1.04
GACAT3-201ENST00000426539 APLNRP35414 380 aa8.53□□□□□ -1.04
GACAT3-201ENST00000426539 RBMXP38159 391 aaKnown RBP8.53□□□□□ -1.04
GACAT3-201ENST00000426539 PSG4Q00888 419 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms