RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 ZNF570Q96NI8 536 aa11.78□□□□□ -0.52
SNX3-204ENST00000426155 FOXN4Q96NZ1 517 aa11.78□□□□□ -0.52
SNX3-204ENST00000426155 MOV10Q9HCE1 1003 aaKnown RBP11.78□□□□□ -0.52
SNX3-204ENST00000426155 IL1RAPQ9NPH3 570 aa11.78□□□□□ -0.52
SNX3-204ENST00000426155 AURKCQ9UQB9 309 aa11.78□□□□□ -0.52
SNX3-204ENST00000426155 A0A1W2PPL8 197 aa11.77□□□□□ -0.53
SNX3-204ENST00000426155 UNC119BA6NIH7 251 aa11.77□□□□□ -0.53
SNX3-204ENST00000426155 PTP4A3O75365 173 aa11.77□□□□□ -0.53
SNX3-204ENST00000426155 NDUFB2O95178 105 aa11.77□□□□□ -0.53
SNX3-204ENST00000426155 CD14P08571 375 aa11.77□□□□□ -0.53
SNX3-204ENST00000426155 MMP7P09237 267 aaPredicted RBP11.77□□□□□ -0.53
SNX3-204ENST00000426155 ZNF35P13682 527 aa11.77□□□□□ -0.53
SNX3-204ENST00000426155 PAX7P23759 505 aa11.77□□□□□ -0.53
SNX3-204ENST00000426155 NUDT6P53370 316 aa11.77□□□□□ -0.53
SNX3-204ENST00000426155 KRR1Q13601 381 aaKnown RBP11.77□□□□□ -0.53
SNX3-204ENST00000426155 DAG1Q14118 895 aa11.77□□□□□ -0.53
SNX3-204ENST00000426155 TRIM25Q14258 630 aaKnown RBP11.77□□□□□ -0.53
SNX3-204ENST00000426155 TAF11Q15544 211 aa11.77□□□□□ -0.53
SNX3-204ENST00000426155 ETFDHQ16134 617 aa11.77□□□□□ -0.53
SNX3-204ENST00000426155 SGCAQ16586 387 aa11.77□□□□□ -0.53
SNX3-204ENST00000426155 ANKDD1AQ495B1 522 aa11.77□□□□□ -0.53
SNX3-204ENST00000426155 DHFR2Q86XF0 187 aa11.77□□□□□ -0.53
SNX3-204ENST00000426155 SVOPLQ8N434 492 aa11.77□□□□□ -0.53
SNX3-204ENST00000426155 NUP37Q8NFH4 326 aa11.77□□□□□ -0.53
SNX3-204ENST00000426155 OR4F15Q8NGB8 312 aa11.77□□□□□ -0.53
SNX3-204ENST00000426155 THTPAQ9BU02 230 aa11.77□□□□□ -0.53
SNX3-204ENST00000426155 ALG12Q9BV10 488 aa11.77□□□□□ -0.53
SNX3-204ENST00000426155 OR51B6Q9H340 312 aa11.77□□□□□ -0.53
SNX3-204ENST00000426155 RNF121Q9H920 327 aa11.77□□□□□ -0.53
SNX3-204ENST00000426155 SMURF2Q9HAU4 748 aa11.77□□□□□ -0.53
SNX3-204ENST00000426155 VNN3Q9NY84 501 aa11.77□□□□□ -0.53
SNX3-204ENST00000426155 STX18Q9P2W9 335 aaKnown RBP11.77□□□□□ -0.53
SNX3-204ENST00000426155 GRHPRQ9UBQ7 328 aa11.77□□□□□ -0.53
SNX3-204ENST00000426155 PRPF19Q9UMS4 504 aaKnown RBP11.77□□□□□ -0.53
SNX3-204ENST00000426155 NSD1Q96L73 2696 aaPredicted RBP11.77□□□□□ -0.53
SNX3-204ENST00000426155 TLN2Q9Y4G6 2542 aa11.77□□□□□ -0.53
SNX3-204ENST00000426155 RTTNQ86VV8 2226 aa11.76□□□□□ -0.53
SNX3-204ENST00000426155 ANK3Q12955 4377 aaKnown RBP11.76□□□□□ -0.53
SNX3-204ENST00000426155 A6NIZ1 184 aa11.76□□□□□ -0.53
SNX3-204ENST00000426155 RNF223E7ERA6 249 aa11.76□□□□□ -0.53
SNX3-204ENST00000426155 H7C417 338 aa11.76□□□□□ -0.53
SNX3-204ENST00000426155 SOCS2O14508 198 aa11.76□□□□□ -0.53
SNX3-204ENST00000426155 OR10H3O60404 316 aa11.76□□□□□ -0.53
SNX3-204ENST00000426155 PPP1R3DO95685 299 aa11.76□□□□□ -0.53
SNX3-204ENST00000426155 SERPINA5P05154 406 aa11.76□□□□□ -0.53
SNX3-204ENST00000426155 SCG5P05408 212 aa11.76□□□□□ -0.53
SNX3-204ENST00000426155 FOSL1P15407 271 aa11.76□□□□□ -0.53
SNX3-204ENST00000426155 NR4A1P22736 598 aa11.76□□□□□ -0.53
SNX3-204ENST00000426155 SERPINF1P36955 418 aa11.76□□□□□ -0.53
SNX3-204ENST00000426155 MAGEA2P43356 314 aa11.76□□□□□ -0.53
SNX3-204ENST00000426155 RAP1BP61224 184 aa11.76□□□□□ -0.53
SNX3-204ENST00000426155 RAP1AP62834 184 aa11.76□□□□□ -0.53
SNX3-204ENST00000426155 MRPS34P82930 218 aaKnown RBP11.76□□□□□ -0.53
SNX3-204ENST00000426155 SLC36A2Q495M3 483 aa11.76□□□□□ -0.53
SNX3-204ENST00000426155 FAM205BPQ63HN1 556 aa11.76□□□□□ -0.53
SNX3-204ENST00000426155 DNM1P46Q6ZS02 220 aa11.76□□□□□ -0.53
SNX3-204ENST00000426155 PTCHD4Q6ZW05 846 aa11.76□□□□□ -0.53
SNX3-204ENST00000426155 ARHGAP24Q8N264 748 aa11.76□□□□□ -0.53
SNX3-204ENST00000426155 ZNF525Q8N782 197 aa11.76□□□□□ -0.53
SNX3-204ENST00000426155 OR9Q2Q8NGE9 314 aa11.76□□□□□ -0.53
SNX3-204ENST00000426155 FANK1Q8TC84 345 aa11.76□□□□□ -0.53
SNX3-204ENST00000426155 SORCS2Q96PQ0 1159 aa11.76□□□□□ -0.53
SNX3-204ENST00000426155 RBP7Q96R05 134 aa11.76□□□□□ -0.53
SNX3-204ENST00000426155 BDH2Q9BUT1 245 aa11.76□□□□□ -0.53
SNX3-204ENST00000426155 DENND2DQ9H6A0 471 aaPredicted RBP11.76□□□□□ -0.53
SNX3-204ENST00000426155 NRIP3Q9NQ35 241 aa11.76□□□□□ -0.53
SNX3-204ENST00000426155 FZR1Q9UM11 496 aa11.76□□□□□ -0.53
SNX3-204ENST00000426155 IER3IP1Q9Y5U9 82 aa11.76□□□□□ -0.53
SNX3-204ENST00000426155 LYVE1Q9Y5Y7 322 aa11.76□□□□□ -0.53
SNX3-204ENST00000426155 C2CD3Q4AC94 2353 aa11.76□□□□□ -0.53
SNX3-204ENST00000426155 IGHV4-30-2A0A087WSY4 118 aa11.75□□□□□ -0.53
SNX3-204ENST00000426155 SLC22A23A1A5C7 686 aa11.75□□□□□ -0.53
SNX3-204ENST00000426155 MGRN1O60291 552 aa11.75□□□□□ -0.53
SNX3-204ENST00000426155 FAM157BP0CG42 384 aa11.75□□□□□ -0.53
SNX3-204ENST00000426155 CTLA4P16410 223 aa11.75□□□□□ -0.53
SNX3-204ENST00000426155 ZNF32P17041 273 aa11.75□□□□□ -0.53
SNX3-204ENST00000426155 NPR2P20594 1047 aa11.75□□□□□ -0.53
SNX3-204ENST00000426155 LAP3P28838 519 aa11.75□□□□□ -0.53
SNX3-204ENST00000426155 SDHAP31040 664 aa11.75□□□□□ -0.53
SNX3-204ENST00000426155 SMIM11AP58511 58 aa11.75□□□□□ -0.53
SNX3-204ENST00000426155 ERVS71-1P61550 626 aa11.75□□□□□ -0.53
SNX3-204ENST00000426155 SNRPD2P62316 118 aaKnown RBP11.75□□□□□ -0.53
SNX3-204ENST00000426155 CHRNB3Q05901 458 aa11.75□□□□□ -0.53
SNX3-204ENST00000426155 RAB35Q15286 201 aa11.75□□□□□ -0.53
SNX3-204ENST00000426155 MTX3Q5HYI7 312 aa11.75□□□□□ -0.53
SNX3-204ENST00000426155 PABPC1L2AQ5JQF8 200 aa11.75□□□□□ -0.53
SNX3-204ENST00000426155 THEM4Q5T1C6 240 aa11.75□□□□□ -0.53
SNX3-204ENST00000426155 TMEM53Q6P2H8 277 aa11.75□□□□□ -0.53
SNX3-204ENST00000426155 PGBD2Q6P3X8 592 aa11.75□□□□□ -0.53
SNX3-204ENST00000426155 UGT2A3Q6UWM9 527 aa11.75□□□□□ -0.53
SNX3-204ENST00000426155 LRP11Q86VZ4 500 aa11.75□□□□□ -0.53
SNX3-204ENST00000426155 ZCCHC24Q8N2G6 241 aaKnown RBP11.75□□□□□ -0.53
SNX3-204ENST00000426155 CPEB3Q8NE35 698 aaKnown RBP11.75□□□□□ -0.53
SNX3-204ENST00000426155 SLC30A7Q8NEW0 376 aa11.75□□□□□ -0.53
SNX3-204ENST00000426155 AKR7LQ8NHP1 331 aa11.75□□□□□ -0.53
SNX3-204ENST00000426155 SLC7A6OSQ96CW6 309 aaPredicted RBP11.75□□□□□ -0.53
SNX3-204ENST00000426155 ASB9Q96DX5 294 aa11.75□□□□□ -0.53
SNX3-204ENST00000426155 GPX7Q96SL4 187 aaPredicted RBP11.75□□□□□ -0.53
SNX3-204ENST00000426155 BTBD10Q9BSF8 475 aa11.75□□□□□ -0.53
SNX3-204ENST00000426155 MRPL37Q9BZE1 423 aaKnown RBP11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms