RNA–Protein interactions for RNA: ENST00000425413.5

UBR4-207, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 2,954 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-207ENST00000425413 TCTE3Q8IZS6 198 aa10.39□□□□□ -0.75
UBR4-207ENST00000425413 HAVCR2Q8TDQ0 301 aa10.39□□□□□ -0.75
UBR4-207ENST00000425413 ADAMTS14Q8WXS8 1223 aa10.39□□□□□ -0.75
UBR4-207ENST00000425413 WDR77Q9BQA1 342 aaPredicted RBP10.39□□□□□ -0.75
UBR4-207ENST00000425413 ZCCHC4Q9H5U6 513 aa10.39□□□□□ -0.75
UBR4-207ENST00000425413 C12orf10Q9HB07 376 aa10.39□□□□□ -0.75
UBR4-207ENST00000425413 PPP4R1LQ9P1A2 415 aa10.39□□□□□ -0.75
UBR4-207ENST00000425413 NPIPA1Q9UND3 350 aa10.39□□□□□ -0.75
UBR4-207ENST00000425413 TMEM14AQ9Y6G1 99 aa10.39□□□□□ -0.75
UBR4-207ENST00000425413 DHFRP00374 187 aa10.39□□□□□ -0.75
UBR4-207ENST00000425413 IGF2P01344 180 aa10.39□□□□□ -0.75
UBR4-207ENST00000425413 ZNF28P17035 718 aa10.39□□□□□ -0.75
UBR4-207ENST00000425413 SFTPDP35247 375 aa10.39□□□□□ -0.75
UBR4-207ENST00000425413 SLC26A5P58743 744 aa10.39□□□□□ -0.75
UBR4-207ENST00000425413 SLC17A1Q14916 467 aa10.39□□□□□ -0.75
UBR4-207ENST00000425413 CARD17Q5XLA6 110 aa10.39□□□□□ -0.75
UBR4-207ENST00000425413 SLC18B1Q6NT16 456 aa10.39□□□□□ -0.75
UBR4-207ENST00000425413 NDUFAF7Q7L592 441 aa10.39□□□□□ -0.75
UBR4-207ENST00000425413 ZFAND1Q8TCF1 268 aa10.39□□□□□ -0.75
UBR4-207ENST00000425413 TMEM234Q8WY98 164 aa10.39□□□□□ -0.75
UBR4-207ENST00000425413 S100A16Q96FQ6 103 aaKnown RBP10.39□□□□□ -0.75
UBR4-207ENST00000425413 DCBLD2Q96PD2 775 aa10.39□□□□□ -0.75
UBR4-207ENST00000425413 GTPBP2Q9BX10 602 aaKnown RBP10.39□□□□□ -0.75
UBR4-207ENST00000425413 IRF2BPLQ9H1B7 796 aa10.39□□□□□ -0.75
UBR4-207ENST00000425413 EMC9Q9Y3B6 208 aa10.39□□□□□ -0.75
UBR4-207ENST00000425413 A0A1B0GTQ1 180 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 MS4A18H0YCH9 400 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 TRIM3O75382 744 aaPredicted RBP10.38□□□□□ -0.75
UBR4-207ENST00000425413 CXCL3P19876 107 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 C17orf67Q0P5P2 114 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 MS4A18Q3C1V0 323 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 MAMSTRQ6ZN01 415 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 NUP54Q7Z3B4 507 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 CPEB2Q7Z5Q1 589 aaKnown RBP10.38□□□□□ -0.75
UBR4-207ENST00000425413 LRRTM1Q86UE6 522 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 SMIM4Q8WVI0 70 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 OR8B4Q96RC9 309 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 OR10A4Q9H209 315 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 URB1O60287 2271 aaKnown RBP10.38□□□□□ -0.75
UBR4-207ENST00000425413 AHCTF1Q8WYP5 2266 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 LOC101059948A0A1B0GTJ6 334 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 MEN1O00255 615 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 FABP7O15540 132 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 EFNA2O43921 213 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 ZNF780AO75290 641 aaPredicted RBP10.38□□□□□ -0.75
UBR4-207ENST00000425413 C1QBP02746 253 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 DCTDP32321 178 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 ART1P52961 327 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 DCXRQ7Z4W1 244 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 DND1Q8IYX4 353 aaKnown RBP10.38□□□□□ -0.75
UBR4-207ENST00000425413 GRPEL2Q8TAA5 225 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 RPS4Y2Q8TD47 263 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 SPSB2Q99619 263 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 DUSP23Q9BVJ7 150 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 TGIF2Q9GZN2 237 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 FBXL2Q9UKC9 423 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 FOXJ3Q9UPW0 622 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 RPH3AQ9Y2J0 694 aaPredicted RBP10.38□□□□□ -0.75
UBR4-207ENST00000425413 LRP12Q9Y561 859 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 TMEM212A6NML5 194 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 FTCDNL1E5RQL4 147 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 OR2T1O43869 369 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 LMX1BO60663 402 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 KDM4BO94953 1096 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 H2AFB2P0C5Z0 115 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 CCL4P13236 92 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 KLK2P20151 261 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 MAPK3P27361 379 aaPredicted RBP10.38□□□□□ -0.75
UBR4-207ENST00000425413 PTH2RP49190 550 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 GLO1Q04760 184 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 EGR3Q06889 387 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 KLF9Q13886 244 aaPredicted RBP10.38□□□□□ -0.75
UBR4-207ENST00000425413 ZNF679Q8IYX0 411 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 OR11H7Q8NGC8 314 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 IFI44Q8TCB0 444 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 GIMAP1Q8WWP7 306 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 DEFB126Q9BYW3 111 aa10.38□□□□□ -0.75
UBR4-207ENST00000425413 CGGBP1Q9UFW8 167 aaPredicted RBP10.38□□□□□ -0.75
UBR4-207ENST00000425413 RALGAPA1Q6GYQ0 2036 aa10.37□□□□□ -0.75
UBR4-207ENST00000425413 TRBV5-5A0A0J9YX44 114 aa10.37□□□□□ -0.75
UBR4-207ENST00000425413 DCDC2BA2VCK2 349 aa10.37□□□□□ -0.75
UBR4-207ENST00000425413 ERVH48-1M5A8F1 160 aa10.37□□□□□ -0.75
UBR4-207ENST00000425413 SSNA1O43805 119 aa10.37□□□□□ -0.75
UBR4-207ENST00000425413 CD1AP06126 327 aa10.37□□□□□ -0.75
UBR4-207ENST00000425413 ZNF823P16415 610 aa10.37□□□□□ -0.75
UBR4-207ENST00000425413 ZNF41P51814 821 aaPredicted RBP10.37□□□□□ -0.75
UBR4-207ENST00000425413 BIDP55957 195 aa10.37□□□□□ -0.75
UBR4-207ENST00000425413 OIT3Q8WWZ8 545 aa10.37□□□□□ -0.75
UBR4-207ENST00000425413 MYOTQ9UBF9 498 aa10.37□□□□□ -0.75
UBR4-207ENST00000425413 ANKUB1A6NFN9 424 aa10.37□□□□□ -0.75
UBR4-207ENST00000425413 VSTM2BA6NLU5 285 aa10.37□□□□□ -0.75
UBR4-207ENST00000425413 ZNF254O75437 659 aa10.37□□□□□ -0.75
UBR4-207ENST00000425413 KRT33AO76009 404 aa10.37□□□□□ -0.75
UBR4-207ENST00000425413 ITGA5P08648 1049 aa10.37□□□□□ -0.75
UBR4-207ENST00000425413 LCN1P31025 176 aa10.37□□□□□ -0.75
UBR4-207ENST00000425413 RIDAP52758 137 aaKnown RBP10.37□□□□□ -0.75
UBR4-207ENST00000425413 HSF1Q00613 529 aa10.37□□□□□ -0.75
UBR4-207ENST00000425413 GUCA2AQ02747 115 aa10.37□□□□□ -0.75
UBR4-207ENST00000425413 CAMK2DQ13557 499 aa10.37□□□□□ -0.75
UBR4-207ENST00000425413 PMS2CLQ68D20 193 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms