RNA–Protein interactions for RNA: ENST00000423982.6

MSH5-206, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 2,706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-206ENST00000423982 ARF3P61204 181 aaPredicted RBP12.97□□□□□ -0.33
MSH5-206ENST00000423982 PARGQ86W56 976 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 MAML2Q8IZL2 1156 aaPredicted RBP12.97□□□□□ -0.33
MSH5-206ENST00000423982 ZNF676Q8N7Q3 588 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 OR4C3Q8NH37 302 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 NUP210LQ5VU65 1888 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 DOK2O60496 412 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 ABHD16AO95870 558 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 CSN2P05814 226 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 RPA2P15927 270 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 FAUP35544 74 aaKnown RBP12.97□□□□□ -0.33
MSH5-206ENST00000423982 RPL35P42766 123 aaKnown RBP12.97□□□□□ -0.33
MSH5-206ENST00000423982 LSSP48449 732 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 GMFBP60983 142 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 NR0B2Q15466 257 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 SHEQ5VZ18 495 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 LIN54Q6MZP7 749 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 DPY19L4Q7Z388 723 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 FAM220AQ7Z4H9 259 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 PRSS35Q8N3Z0 413 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 EIF4E3Q8N5X7 224 aaKnown RBP12.97□□□□□ -0.33
MSH5-206ENST00000423982 KLHDC3Q9BQ90 382 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 TINAGL1Q9GZM7 467 aaPredicted RBP12.97□□□□□ -0.33
MSH5-206ENST00000423982 KIR3DX1Q9H7L2 352 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 SLC6A5Q9Y345 797 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 ETV7Q9Y603 341 aa12.97□□□□□ -0.33
MSH5-206ENST00000423982 A0A087WV62 115 aa12.96□□□□□ -0.33
MSH5-206ENST00000423982 OR4C45A6NMZ5 311 aa12.96□□□□□ -0.33
MSH5-206ENST00000423982 GPR31O00270 319 aa12.96□□□□□ -0.33
MSH5-206ENST00000423982 GMFGO60234 142 aa12.96□□□□□ -0.33
MSH5-206ENST00000423982 EIF4E2O60573 245 aaKnown RBP12.96□□□□□ -0.33
MSH5-206ENST00000423982 ALOX12BO75342 701 aa12.96□□□□□ -0.33
MSH5-206ENST00000423982 AQP8O94778 261 aa12.96□□□□□ -0.33
MSH5-206ENST00000423982 NKX2-2O95096 273 aa12.96□□□□□ -0.33
MSH5-206ENST00000423982 AKR7A3O95154 331 aa12.96□□□□□ -0.33
MSH5-206ENST00000423982 PPM1FP49593 454 aaPredicted RBP12.96□□□□□ -0.33
MSH5-206ENST00000423982 PDSS1Q5T2R2 415 aa12.96□□□□□ -0.33
MSH5-206ENST00000423982 ZNF227Q86WZ6 799 aa12.96□□□□□ -0.33
MSH5-206ENST00000423982 GALNT16Q8N428 558 aa12.96□□□□□ -0.33
MSH5-206ENST00000423982 PLPP7Q8NBV4 271 aa12.96□□□□□ -0.33
MSH5-206ENST00000423982 OR1J2Q8NGS2 313 aa12.96□□□□□ -0.33
MSH5-206ENST00000423982 OR6N2Q8NGY6 317 aa12.96□□□□□ -0.33
MSH5-206ENST00000423982 LMX1AQ8TE12 382 aa12.96□□□□□ -0.33
MSH5-206ENST00000423982 SCARF2Q96GP6 870 aaPredicted RBP12.96□□□□□ -0.33
MSH5-206ENST00000423982 ELF4Q99607 663 aaPredicted RBP12.96□□□□□ -0.33
MSH5-206ENST00000423982 PELOQ9BRX2 385 aaKnown RBP12.96□□□□□ -0.33
MSH5-206ENST00000423982 LRRC61Q9BV99 259 aa12.96□□□□□ -0.33
MSH5-206ENST00000423982 PLCL2Q9UPR0 1127 aa12.96□□□□□ -0.33
MSH5-206ENST00000423982 OR10H1Q9Y4A9 318 aa12.96□□□□□ -0.33
MSH5-206ENST00000423982 PI4KAP42356 2102 aa12.96□□□□□ -0.33
MSH5-206ENST00000423982 LOC100509620A0A075B734 347 aa12.96□□□□□ -0.34
MSH5-206ENST00000423982 TRBV5-5A0A0J9YX44 114 aa12.96□□□□□ -0.34
MSH5-206ENST00000423982 RFPL4AA6NLU0 287 aa12.96□□□□□ -0.34
MSH5-206ENST00000423982 RFPL4AL1F8VTS6 287 aa12.96□□□□□ -0.34
MSH5-206ENST00000423982 LDOC1O95751 146 aaPredicted RBP12.96□□□□□ -0.34
MSH5-206ENST00000423982 OR4E1P0C645 316 aa12.96□□□□□ -0.34
MSH5-206ENST00000423982 AKAIN1P0CW23 69 aa12.96□□□□□ -0.34
MSH5-206ENST00000423982 RAB3AP20336 220 aa12.96□□□□□ -0.34
MSH5-206ENST00000423982 STEAP1BQ6NZ63 245 aa12.96□□□□□ -0.34
MSH5-206ENST00000423982 ANKRD16Q6P6B7 361 aa12.96□□□□□ -0.34
MSH5-206ENST00000423982 FIGLAQ6QHK4 219 aa12.96□□□□□ -0.34
MSH5-206ENST00000423982 RCBTB1Q8NDN9 531 aa12.96□□□□□ -0.34
MSH5-206ENST00000423982 TMEM185AQ8NFB2 350 aa12.96□□□□□ -0.34
MSH5-206ENST00000423982 CADM4Q8NFZ8 388 aa12.96□□□□□ -0.34
MSH5-206ENST00000423982 OR2G2Q8NGZ5 317 aa12.96□□□□□ -0.34
MSH5-206ENST00000423982 ANKRD9Q96BM1 317 aaPredicted RBP12.96□□□□□ -0.34
MSH5-206ENST00000423982 ZNF524Q96C55 264 aa12.96□□□□□ -0.34
MSH5-206ENST00000423982 NKX6-2Q9C056 277 aaPredicted RBP12.96□□□□□ -0.34
MSH5-206ENST00000423982 SLC7A5P2Q9GIP4 190 aa12.96□□□□□ -0.34
MSH5-206ENST00000423982 RASL12Q9NYN1 266 aa12.96□□□□□ -0.34
MSH5-206ENST00000423982 GTF2A1LQ9UNN4 478 aa12.96□□□□□ -0.34
MSH5-206ENST00000423982 COLEC10Q9Y6Z7 277 aa12.96□□□□□ -0.34
MSH5-206ENST00000423982 IGKV1D-42A0A075B6H8 117 aa12.95□□□□□ -0.34
MSH5-206ENST00000423982 C10orf142B7Z368 130 aa12.95□□□□□ -0.34
MSH5-206ENST00000423982 BCAT2O15382 392 aaPredicted RBP12.95□□□□□ -0.34
MSH5-206ENST00000423982 CSF1P09603 554 aa12.95□□□□□ -0.34
MSH5-206ENST00000423982 AKR1D1P51857 326 aa12.95□□□□□ -0.34
MSH5-206ENST00000423982 C2orf76Q3KRA6 126 aa12.95□□□□□ -0.34
MSH5-206ENST00000423982 ARHGAP40Q5TG30 622 aa12.95□□□□□ -0.34
MSH5-206ENST00000423982 SLC6A19Q695T7 634 aa12.95□□□□□ -0.34
MSH5-206ENST00000423982 BEST3Q8N1M1 668 aa12.95□□□□□ -0.34
MSH5-206ENST00000423982 CLEC1AQ8NC01 280 aa12.95□□□□□ -0.34
MSH5-206ENST00000423982 STEAP2Q8NFT2 490 aa12.95□□□□□ -0.34
MSH5-206ENST00000423982 CTHRC1Q96CG8 243 aa12.95□□□□□ -0.34
MSH5-206ENST00000423982 A0A087WUJ7 227 aa12.95□□□□□ -0.34
MSH5-206ENST00000423982 OR10H2O60403 315 aa12.95□□□□□ -0.34
MSH5-206ENST00000423982 RDH16O75452 317 aa12.95□□□□□ -0.34
MSH5-206ENST00000423982 MNDAP41218 407 aa12.95□□□□□ -0.34
MSH5-206ENST00000423982 STARP49675 285 aa12.95□□□□□ -0.34
MSH5-206ENST00000423982 PPP1CAP62136 330 aa12.95□□□□□ -0.34
MSH5-206ENST00000423982 DEFB133Q30KQ1 61 aa12.95□□□□□ -0.34
MSH5-206ENST00000423982 DEFB110Q30KQ9 67 aa12.95□□□□□ -0.34
MSH5-206ENST00000423982 SLC35D3Q5M8T2 416 aa12.95□□□□□ -0.34
MSH5-206ENST00000423982 ASPHD2Q6ICH7 369 aa12.95□□□□□ -0.34
MSH5-206ENST00000423982 NPSR1Q6W5P4 371 aa12.95□□□□□ -0.34
MSH5-206ENST00000423982 KRT77Q7Z794 578 aa12.95□□□□□ -0.34
MSH5-206ENST00000423982 JAZF1Q86VZ6 243 aa12.95□□□□□ -0.34
MSH5-206ENST00000423982 ATG5Q9H1Y0 275 aa12.95□□□□□ -0.34
MSH5-206ENST00000423982 CEP192Q8TEP8 1941 aa12.94□□□□□ -0.34
MSH5-206ENST00000423982 A0A1W2PR77 199 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms