RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 CRABP1P29762 137 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 SUB1P53999 127 aaKnown RBP eCLIP3.18□□□□□ -1.98e-10■■■■■ 50.2
TOP2A-201ENST00000423485 TMEM33P57088 247 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 CSNK2BP67870 215 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 SLC10A7Q0GE19 358 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 POU4F2Q12837 409 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 DHRS2Q13268 280 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 CDK10Q15131 360 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 TRMT12Q53H54 448 aaKnown RBP3.18□□□□□ -1.9
TOP2A-201ENST00000423485 C9orf66Q5T8R8 295 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 ANKRD16Q6P6B7 361 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 SHFQ7M4L6 423 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 CPNE9Q8IYJ1 553 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 MICU2Q8IYU8 434 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 MFSD4AQ8N468 514 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 STPG3Q8N7X2 389 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 OR52K1Q8NGK4 314 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 HMGCLL1Q8TB92 370 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 PHF21BQ96EK2 531 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 MARS2Q96GW9 593 aaKnown RBP3.18□□□□□ -1.9
TOP2A-201ENST00000423485 DUX5Q96PT3 197 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 PDCD1LG2Q9BQ51 273 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 ACSS3Q9H6R3 686 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 MAN2C1Q9NTJ4 1040 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 SLC17A6Q9P2U8 582 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 STUB1Q9UNE7 303 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 TESMINQ9Y4I5 508 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 MED13LQ71F56 2210 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 USF3Q68DE3 2245 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 PPIAL4EA0A075B759 164 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 ARPC4-TTLL3A0A0A6YYG9 625 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 TMEM202A6NGA9 273 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 HHLA1C9JL84 531 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 PPIAL4DF5H284 164 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 APOC4-APOC2K7ER74 178 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 FOXN3O00409 490 aaPredicted RBP3.18□□□□□ -1.9
TOP2A-201ENST00000423485 ZNF780AO75290 641 aaPredicted RBP3.18□□□□□ -1.9
TOP2A-201ENST00000423485 LYPLA1O75608 230 aaPredicted RBP3.18□□□□□ -1.9
TOP2A-201ENST00000423485 PIAS1O75925 651 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 APOC2P02655 101 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 OPN1LWP04000 364 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 FCER2P06734 321 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 FBXO45P0C2W1 286 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 PPIAL4FP0DN26 164 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 IFI30P13284 250 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 ZNF23P17027 643 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 HMGA1P17096 107 aaKnown RBP3.18□□□□□ -1.9
TOP2A-201ENST00000423485 SDC1P18827 310 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 CRHBPP24387 322 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 GP5P40197 560 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 MRPL19P49406 292 aaKnown RBP3.18□□□□□ -1.9
TOP2A-201ENST00000423485 DLX5P56178 289 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 GABARAPL2P60520 117 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 PITX1P78337 314 aaPredicted RBP3.18□□□□□ -1.9
TOP2A-201ENST00000423485 CRADDP78560 199 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 GTF2H2Q13888 395 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 CNPY1Q3B7I2 92 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 SMIM21Q3B7S5 101 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 UGT3A2Q3SY77 523 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 ZNF684Q5T5D7 378 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 GTF2H2CQ6P1K8 395 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 FIGNL1Q6PIW4 674 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 NKAIN4Q8IVV8 208 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 OR5D16Q8NGK9 328 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 OR4A5Q8NH83 315 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 RGP1Q92546 391 aaPredicted RBP3.18□□□□□ -1.9
TOP2A-201ENST00000423485 RNF157Q96PX1 679 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 S1PR3Q99500 378 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 FMO2Q99518 471 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 MED11Q9P086 117 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 ATPIF1Q9UII2 106 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 WIPI2Q9Y4P8 454 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 DOCK10Q96BY6 2186 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 COL27A1Q8IZC6 1860 aaPredicted RBP3.18□□□□□ -1.9
TOP2A-201ENST00000423485 MEGF8Q7Z7M0 2845 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 hADV38S2A0JD32 116 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 TMEM120BA0PK00 339 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 CCDC160A6NGH7 325 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 SYNGR3O43761 229 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 FMO6PO60774 539 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 SNCGO76070 127 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 CEACAM5P06731 702 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 CD22P20273 847 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 OMPP47874 163 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 RPL38P63173 70 aaKnown RBP3.18□□□□□ -1.9
TOP2A-201ENST00000423485 PIGFQ07326 219 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 ENTPD8Q5MY95 495 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 ATAD3CQ5T2N8 411 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 OR5M10Q6IEU7 315 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 FAM122CQ6P4D5 195 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 PCSK4Q6UW60 755 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 CYS1Q717R9 158 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 FAM214BQ7L5A3 538 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 B3GNT8Q7Z7M8 397 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 UMODL1-AS1Q8N2C9 162 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 PTGR2Q8N8N7 351 aaPredicted RBP3.18□□□□□ -1.9
TOP2A-201ENST00000423485 C1orf54Q8WWF1 131 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 STARD4Q96DR4 205 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 KIRREL1Q96J84 757 aa3.18□□□□□ -1.9
TOP2A-201ENST00000423485 RBM38Q9H0Z9 239 aaKnown RBP3.18□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms