RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 C11orf40Q8WZ69 217 aa21.74■■□□□ 1.07
VEGFA-208ENST00000417285 C1orf159Q96HA4 380 aa21.74■■□□□ 1.07
VEGFA-208ENST00000417285 KCTD14Q9BQ13 255 aaPredicted RBP21.74■■□□□ 1.07
VEGFA-208ENST00000417285 TXNIPQ9H3M7 391 aa21.74■■□□□ 1.07
VEGFA-208ENST00000417285 RHCGQ9UBD6 479 aa21.74■■□□□ 1.07
VEGFA-208ENST00000417285 SNX13Q9Y5W8 968 aa21.74■■□□□ 1.07
VEGFA-208ENST00000417285 A0A1W2PPW3 197 aa21.73■■□□□ 1.07
VEGFA-208ENST00000417285 GMNCA6NCL1 334 aa21.73■■□□□ 1.07
VEGFA-208ENST00000417285 LYNX1G3V0Z9 82 aa21.73■■□□□ 1.07
VEGFA-208ENST00000417285 J3KTA2 159 aa21.73■■□□□ 1.07
VEGFA-208ENST00000417285 SERPINA1P01009 418 aa21.73■■□□□ 1.07
VEGFA-208ENST00000417285 LYNX1P0DP58 116 aa21.73■■□□□ 1.07
VEGFA-208ENST00000417285 SAGP10523 405 aaPredicted RBP21.73■■□□□ 1.07
VEGFA-208ENST00000417285 SEC24CP53992 1094 aa21.73■■□□□ 1.07
VEGFA-208ENST00000417285 MRPS34P82930 218 aaKnown RBP21.73■■□□□ 1.07
VEGFA-208ENST00000417285 MOGQ16653 247 aa21.73■■□□□ 1.07
VEGFA-208ENST00000417285 ZNF519Q8TB69 540 aa21.73■■□□□ 1.07
VEGFA-208ENST00000417285 FAM162AQ96A26 154 aa21.73■■□□□ 1.07
VEGFA-208ENST00000417285 HSH2DQ96JZ2 352 aa21.73■■□□□ 1.07
VEGFA-208ENST00000417285 SNX18Q96RF0 628 aa21.73■■□□□ 1.07
VEGFA-208ENST00000417285 BCL2L14Q9BZR8 327 aa21.73■■□□□ 1.07
VEGFA-208ENST00000417285 NSRP1Q9H0G5 558 aaKnown RBP21.73■■□□□ 1.07
VEGFA-208ENST00000417285 SLCO1C1Q9NYB5 712 aa21.73■■□□□ 1.07
VEGFA-208ENST00000417285 FZR1Q9UM11 496 aa21.73■■□□□ 1.07
VEGFA-208ENST00000417285 ZNF250P15622 560 aa21.72■■□□□ 1.07
VEGFA-208ENST00000417285 TCN1P20061 433 aaPredicted RBP21.72■■□□□ 1.07
VEGFA-208ENST00000417285 ACHEP22303 614 aa21.72■■□□□ 1.07
VEGFA-208ENST00000417285 UCP2P55851 309 aa21.72■■□□□ 1.07
VEGFA-208ENST00000417285 CD47Q08722 323 aa21.72■■□□□ 1.07
VEGFA-208ENST00000417285 TOP3AQ13472 1001 aaPredicted RBP21.72■■□□□ 1.07
VEGFA-208ENST00000417285 ANKDD1AQ495B1 522 aa21.72■■□□□ 1.07
VEGFA-208ENST00000417285 ELFN2Q5R3F8 820 aa21.72■■□□□ 1.07
VEGFA-208ENST00000417285 CYP4Z1Q86W10 505 aa21.72■■□□□ 1.07
VEGFA-208ENST00000417285 PHC2Q8IXK0 858 aa21.72■■□□□ 1.07
VEGFA-208ENST00000417285 NRMQ8IXM6 262 aa21.72■■□□□ 1.07
VEGFA-208ENST00000417285 RNF113BQ8IZP6 322 aaKnown RBP21.72■■□□□ 1.07
VEGFA-208ENST00000417285 SYNPRQ8TBG9 265 aa21.72■■□□□ 1.07
VEGFA-208ENST00000417285 FNDC8Q8TC99 324 aa21.72■■□□□ 1.07
VEGFA-208ENST00000417285 SOX7Q9BT81 388 aa21.72■■□□□ 1.07
VEGFA-208ENST00000417285 FAM107BQ9H098 131 aa21.72■■□□□ 1.07
VEGFA-208ENST00000417285 MYLK2Q9H1R3 596 aa21.72■■□□□ 1.07
VEGFA-208ENST00000417285 MAN2C1Q9NTJ4 1040 aa21.72■■□□□ 1.07
VEGFA-208ENST00000417285 ABCD2Q9UBJ2 740 aa21.72■■□□□ 1.07
VEGFA-208ENST00000417285 HPXP02790 462 aa21.71■■□□□ 1.07
VEGFA-208ENST00000417285 MMP7P09237 267 aaPredicted RBP21.71■■□□□ 1.07
VEGFA-208ENST00000417285 FAM157BP0CG42 384 aa21.71■■□□□ 1.07
VEGFA-208ENST00000417285 MAKP20794 623 aa21.71■■□□□ 1.07
VEGFA-208ENST00000417285 COL8A2P25067 703 aa21.71■■□□□ 1.07
VEGFA-208ENST00000417285 PRDX6P30041 224 aa21.71■■□□□ 1.07
VEGFA-208ENST00000417285 KLF3P57682 345 aaPredicted RBP21.71■■□□□ 1.07
VEGFA-208ENST00000417285 PSME3P61289 254 aa21.71■■□□□ 1.07
VEGFA-208ENST00000417285 PRKCDQ05655 676 aa21.71■■□□□ 1.07
VEGFA-208ENST00000417285 MAD2L1BPQ15013 274 aaPredicted RBP21.71■■□□□ 1.07
VEGFA-208ENST00000417285 NKPD1Q17RQ9 610 aa21.71■■□□□ 1.07
VEGFA-208ENST00000417285 ZNF730Q6ZMV8 503 aa21.71■■□□□ 1.07
VEGFA-208ENST00000417285 LRRC18Q8N456 261 aa21.71■■□□□ 1.07
VEGFA-208ENST00000417285 ACOT11Q8WXI4 607 aaPredicted RBP21.71■■□□□ 1.07
VEGFA-208ENST00000417285 HDAC2Q92769 488 aaKnown RBP21.71■■□□□ 1.07
VEGFA-208ENST00000417285 RBP7Q96R05 134 aa21.71■■□□□ 1.07
VEGFA-208ENST00000417285 ALG12Q9BV10 488 aa21.71■■□□□ 1.07
VEGFA-208ENST00000417285 MYEF2Q9P2K5 600 aaKnown RBP21.71■■□□□ 1.07
VEGFA-208ENST00000417285 TMEFF2Q9UIK5 374 aaPredicted RBP21.71■■□□□ 1.07
VEGFA-208ENST00000417285 RPS6KA6Q9UK32 745 aa21.71■■□□□ 1.07
VEGFA-208ENST00000417285 IGLV3-9A0A075B6K5 115 aa21.7■■□□□ 1.06
VEGFA-208ENST00000417285 EFCAB9A8MZ26 197 aa21.7■■□□□ 1.06
VEGFA-208ENST00000417285 FFAR1O14842 300 aa21.7■■□□□ 1.06
VEGFA-208ENST00000417285 SLC2A10O95528 541 aa21.7■■□□□ 1.06
VEGFA-208ENST00000417285 IGHMP01871 453 aa21.7■■□□□ 1.06
VEGFA-208ENST00000417285 LCKP06239 509 aa21.7■■□□□ 1.06
VEGFA-208ENST00000417285 CCL2P13500 99 aa21.7■■□□□ 1.06
VEGFA-208ENST00000417285 PCMT1P22061 227 aa21.7■■□□□ 1.06
VEGFA-208ENST00000417285 IL2RGP31785 369 aa21.7■■□□□ 1.06
VEGFA-208ENST00000417285 APLNRP35414 380 aa21.7■■□□□ 1.06
VEGFA-208ENST00000417285 GPR6P46095 362 aaPredicted RBP21.7■■□□□ 1.06
VEGFA-208ENST00000417285 SLC9A3P48764 834 aa21.7■■□□□ 1.06
VEGFA-208ENST00000417285 CDH15P55291 814 aa21.7■■□□□ 1.06
VEGFA-208ENST00000417285 CTXN1P60606 82 aa21.7■■□□□ 1.06
VEGFA-208ENST00000417285 RPL27P61353 136 aaKnown RBP21.7■■□□□ 1.06
VEGFA-208ENST00000417285 HSF2Q03933 536 aa21.7■■□□□ 1.06
VEGFA-208ENST00000417285 CR1LQ2VPA4 569 aa21.7■■□□□ 1.06
VEGFA-208ENST00000417285 PCGF3Q3KNV8 242 aa21.7■■□□□ 1.06
VEGFA-208ENST00000417285 THEM4Q5T1C6 240 aa21.7■■□□□ 1.06
VEGFA-208ENST00000417285 FAM205BPQ63HN1 556 aa21.7■■□□□ 1.06
VEGFA-208ENST00000417285 TMEM154Q6P9G4 183 aa21.7■■□□□ 1.06
VEGFA-208ENST00000417285 OAFQ86UD1 273 aa21.7■■□□□ 1.06
VEGFA-208ENST00000417285 PAQR4Q8N4S7 273 aaPredicted RBP21.7■■□□□ 1.06
VEGFA-208ENST00000417285 NMD3Q96D46 503 aaKnown RBP21.7■■□□□ 1.06
VEGFA-208ENST00000417285 REPIN1Q9BWE0 567 aaKnown RBP21.7■■□□□ 1.06
VEGFA-208ENST00000417285 CCNB1IP1Q9NPC3 277 aa21.7■■□□□ 1.06
VEGFA-208ENST00000417285 SPAG4Q9NPE6 437 aa21.7■■□□□ 1.06
VEGFA-208ENST00000417285 HINT3Q9NQE9 182 aaKnown RBP21.7■■□□□ 1.06
VEGFA-208ENST00000417285 TAAR3PQ9P1P4 343 aa21.7■■□□□ 1.06
VEGFA-208ENST00000417285 NAT2P11245 290 aa21.69■■□□□ 1.06
VEGFA-208ENST00000417285 FUT4P22083 530 aa21.69■■□□□ 1.06
VEGFA-208ENST00000417285 GUCA1AP43080 201 aaPredicted RBP21.69■■□□□ 1.06
VEGFA-208ENST00000417285 TRIP10Q15642 601 aa21.69■■□□□ 1.06
VEGFA-208ENST00000417285 UNQ6126/PRO20091Q6UXV3 157 aa21.69■■□□□ 1.06
VEGFA-208ENST00000417285 MBOAT2Q6ZWT7 520 aa21.69■■□□□ 1.06
VEGFA-208ENST00000417285 RRM2BQ7LG56 351 aa21.69■■□□□ 1.06
VEGFA-208ENST00000417285 CPLX4Q7Z7G2 160 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms