RNA–Protein interactions for RNA: ENST00000416649.6

NCKIPSD-204, Transcript of NCK interacting protein with SH3 domain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NCKIPSD, Length 2,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-204ENST00000416649 SLC2A12Q8TD20 617 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 MEGF10Q96KG7 1140 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 MRGPRX3Q96LB0 322 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 SULT4A1Q9BR01 284 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 EDEM2Q9BV94 578 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 MTHFD2LQ9H903 347 aaPredicted RBP13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 HAO2Q9NYQ3 351 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 TCF20Q9UGU0 1960 aaKnown RBP13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 PRR32B1ATL7 298 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 SERPINA5P05154 406 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 C6P13671 934 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 TIMP2P16035 220 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 SLC6A6P31641 620 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 Q499Y3 187 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 RPL13AP3Q6NVV1 102 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 ZNF585AQ6P3V2 769 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 OR4N5Q8IXE1 308 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 DMRTC2Q8IXT2 367 aaPredicted RBP13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 TMEM106AQ96A25 262 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 S100PBPQ96BU1 408 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 FOXRED1Q96CU9 486 aaPredicted RBP13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 KXD1Q9BQD3 176 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 RPP25Q9BUL9 199 aaKnown RBP13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 RSPH9Q9H1X1 276 aaPredicted RBP13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 GTF2A1LQ9UNN4 478 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 LRRC72A6NJI9 287 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 CD79AP11912 226 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 RBM34P42696 430 aaKnown RBP13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 ID4P47928 161 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 ARHGAP11AQ6P4F7 1023 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 ZNF676Q8N7Q3 588 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 ACOT4Q8N9L9 421 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 OR4S1Q8NGB4 309 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 OR51A4Q8NGJ6 313 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 ZPLD1Q8TCW7 415 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 SFXN5Q8TD22 340 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 RNF122Q9H9V4 155 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 IL36AQ9UHA7 158 aa13.36□□□□□ -0.27
NCKIPSD-204ENST00000416649 A0A1B0GTI1 187 aa13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 C4orf51C9J302 202 aa13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 YIF1AO95070 293 aa13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 WNT11O96014 354 aa13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 CD74P04233 296 aa13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 FOLR2P14207 255 aa13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 AKR1C4P17516 323 aa13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 RPS27P42677 84 aaKnown RBP13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 IL13RA1P78552 427 aa13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 TDGQ13569 410 aa13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 EIF2B1Q14232 305 aaKnown RBP13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 SLC35F3Q8IY50 421 aa13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 FAM24BQ8N5W8 94 aa13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 OR10H5Q8NGA6 315 aa13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 ASB13Q8WXK3 278 aa13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 PHYHIPQ92561 330 aa13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 PTCHD1Q96NR3 888 aa13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 AICDAQ9GZX7 198 aa13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 PARP12Q9H0J9 701 aaKnown RBP13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 SEC61A2Q9H9S3 476 aa13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 FBXO34Q9NWN3 711 aa13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 DMRT1Q9Y5R6 373 aa13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 ZNF780BQ9Y6R6 833 aa13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 CELSR3Q9NYQ7 3312 aa13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 TMEM72A0PK05 275 aa13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 C2orf74A8MZ97 194 aa13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 ARG1P05089 322 aa13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 GPR1P46091 355 aa13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 PPP1R1AQ13522 171 aa13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 EXOSC6Q5RKV6 272 aaKnown RBP13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 PRAMEF8Q5VWM4 474 aa13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 PRAMEF7Q5VXH5 474 aa13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 ANKRD16Q6P6B7 361 aa13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 TMPPEQ6ZT21 453 aa13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 PARS2Q7L3T8 475 aaKnown RBP13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 ZDHHC12Q96GR4 267 aa13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 TOLLIPQ9H0E2 274 aa13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 CHMP1AQ9HD42 196 aaPredicted RBP13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 ADAP2Q9NPF8 381 aa13.35□□□□□ -0.27
NCKIPSD-204ENST00000416649 C9JQL5 133 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 MED6O75586 246 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 CYB5AP00167 134 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 P2RY4P51582 365 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 TAS2R19P59542 299 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 ADAM8P78325 824 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 DUSP5Q16690 384 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 FAM220AQ7Z4H9 259 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 BIVMQ86UB2 503 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 ZNF383Q8NA42 475 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 POMGNT2Q8NAT1 580 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 PHOSPHO2Q8TCD6 241 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 NKD1Q969G9 470 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 DNAJA3Q96EY1 480 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 IP6K3Q96PC2 410 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 TSSK2Q96PF2 358 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 MRI1Q9BV20 369 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 TGIF2Q9GZN2 237 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 ALX4Q9H161 411 aaPredicted RBP13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 TMPRSS5Q9H3S3 457 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 DEC1Q9P2X7 70 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 COL6A3P12111 3177 aa13.34□□□□□ -0.27
NCKIPSD-204ENST00000416649 ELOA3DA6NLF2 546 aaPredicted RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms