RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 SLC18A1P54219 525 aa10.28□□□□□ -0.76
LIMS2-210ENST00000413578 SLC3A1Q07837 685 aa10.28□□□□□ -0.76
LIMS2-210ENST00000413578 PABPC1L2AQ5JQF8 200 aa10.28□□□□□ -0.76
LIMS2-210ENST00000413578 ENTPD8Q5MY95 495 aa10.28□□□□□ -0.76
LIMS2-210ENST00000413578 MBNL2Q5VZF2 373 aaKnown RBP10.28□□□□□ -0.76
LIMS2-210ENST00000413578 PTOV1Q86YD1 416 aa10.28□□□□□ -0.76
LIMS2-210ENST00000413578 SMYD1Q8NB12 490 aa10.28□□□□□ -0.76
LIMS2-210ENST00000413578 SYT14Q8NB59 555 aa10.28□□□□□ -0.76
LIMS2-210ENST00000413578 NOXO1Q8NFA2 376 aa10.28□□□□□ -0.76
LIMS2-210ENST00000413578 OR1J1Q8NGS3 322 aa10.28□□□□□ -0.76
LIMS2-210ENST00000413578 ADAMTS16Q8TE57 1224 aa10.28□□□□□ -0.76
LIMS2-210ENST00000413578 IPCEF1Q8WWN9 437 aaPredicted RBP10.28□□□□□ -0.76
LIMS2-210ENST00000413578 NABP1Q96AH0 204 aa10.28□□□□□ -0.76
LIMS2-210ENST00000413578 TRIM44Q96DX7 344 aaPredicted RBP10.28□□□□□ -0.76
LIMS2-210ENST00000413578 ZNF48Q96MX3 618 aaPredicted RBP10.28□□□□□ -0.76
LIMS2-210ENST00000413578 C1QTNF5Q9BXJ0 243 aa10.28□□□□□ -0.76
LIMS2-210ENST00000413578 SLC19A3Q9BZV2 496 aa10.28□□□□□ -0.76
LIMS2-210ENST00000413578 PCDHAC1Q9H158 963 aa10.28□□□□□ -0.76
LIMS2-210ENST00000413578 LRMDAQ9H2I8 198 aa10.28□□□□□ -0.76
LIMS2-210ENST00000413578 ZMAT3Q9HA38 289 aaKnown RBP10.28□□□□□ -0.76
LIMS2-210ENST00000413578 NANSQ9NR45 359 aa10.28□□□□□ -0.76
LIMS2-210ENST00000413578 DCAF16Q9NXF7 216 aa10.28□□□□□ -0.76
LIMS2-210ENST00000413578 ZNF69Q9UC07 566 aa10.28□□□□□ -0.76
LIMS2-210ENST00000413578 PURGQ9UJV8 347 aaKnown RBP10.28□□□□□ -0.76
LIMS2-210ENST00000413578 UGT2A1Q9Y4X1 527 aa10.28□□□□□ -0.76
LIMS2-210ENST00000413578 LOC100509620A0A075B734 347 aa10.27□□□□□ -0.77
LIMS2-210ENST00000413578 IGKV1D-43A0A0B4J1Z2 117 aa10.27□□□□□ -0.77
LIMS2-210ENST00000413578 A8MXK9 166 aa10.27□□□□□ -0.77
LIMS2-210ENST00000413578 TRAPPC2LH3BP13 241 aa10.27□□□□□ -0.77
LIMS2-210ENST00000413578 CLDN34H7C241 214 aa10.27□□□□□ -0.77
LIMS2-210ENST00000413578 TPD52L2O43399 206 aaKnown RBP10.27□□□□□ -0.77
LIMS2-210ENST00000413578 SPRY3O43610 288 aa10.27□□□□□ -0.77
LIMS2-210ENST00000413578 FOXH1O75593 365 aa10.27□□□□□ -0.77
LIMS2-210ENST00000413578 OR6A2O95222 327 aa10.27□□□□□ -0.77
LIMS2-210ENST00000413578 IGHV2-70P01814 119 aa10.27□□□□□ -0.77
LIMS2-210ENST00000413578 RNASE1P07998 156 aaKnown RBP10.27□□□□□ -0.77
LIMS2-210ENST00000413578 TSPAN19P0C672 248 aa10.27□□□□□ -0.77
LIMS2-210ENST00000413578 ZNF12P17014 697 aa10.27□□□□□ -0.77
LIMS2-210ENST00000413578 DRD4P21917 467 aa10.27□□□□□ -0.77
LIMS2-210ENST00000413578 APLNRP35414 380 aa10.27□□□□□ -0.77
LIMS2-210ENST00000413578 UGT2B15P54855 530 aa10.27□□□□□ -0.77
LIMS2-210ENST00000413578 MRPS34P82930 218 aaKnown RBP10.27□□□□□ -0.77
LIMS2-210ENST00000413578 DEFA6Q01524 100 aa10.27□□□□□ -0.77
LIMS2-210ENST00000413578 PLP2Q04941 152 aa10.27□□□□□ -0.77
LIMS2-210ENST00000413578 HNRNPA0Q13151 305 aaKnown RBP10.27□□□□□ -0.77
LIMS2-210ENST00000413578 SPATA46Q5T0L3 261 aa10.27□□□□□ -0.77
LIMS2-210ENST00000413578 THEM4Q5T1C6 240 aa10.27□□□□□ -0.77
LIMS2-210ENST00000413578 TREML4Q6UXN2 200 aa10.27□□□□□ -0.77
LIMS2-210ENST00000413578 DLEU7Q6UYE1 221 aa10.27□□□□□ -0.77
LIMS2-210ENST00000413578 RBM45Q8IUH3 476 aaKnown RBP10.27□□□□□ -0.77
LIMS2-210ENST00000413578 BCL6BQ8N143 479 aaPredicted RBP10.27□□□□□ -0.77
LIMS2-210ENST00000413578 ICA1LQ8NDH6 482 aa10.27□□□□□ -0.77
LIMS2-210ENST00000413578 SLC25A40Q8TBP6 338 aa10.27□□□□□ -0.77
LIMS2-210ENST00000413578 KLF14Q8TD94 323 aaPredicted RBP10.27□□□□□ -0.77
LIMS2-210ENST00000413578 ASB10Q8WXI3 467 aa10.27□□□□□ -0.77
LIMS2-210ENST00000413578 ZBTB9Q96C00 473 aa10.27□□□□□ -0.77
LIMS2-210ENST00000413578 SPDL1Q96EA4 605 aa10.27□□□□□ -0.77
LIMS2-210ENST00000413578 MPP4Q96JB8 637 aa10.27□□□□□ -0.77
LIMS2-210ENST00000413578 PRSS27Q9BQR3 290 aa10.27□□□□□ -0.77
LIMS2-210ENST00000413578 CPPED1Q9BRF8 314 aaPredicted RBP10.27□□□□□ -0.77
LIMS2-210ENST00000413578 CENPHQ9H3R5 247 aa10.27□□□□□ -0.77
LIMS2-210ENST00000413578 UNKLQ9H9P5 680 aaKnown RBP10.27□□□□□ -0.77
LIMS2-210ENST00000413578 SIAEQ9HAT2 523 aa10.27□□□□□ -0.77
LIMS2-210ENST00000413578 NPHS2Q9NP85 383 aa10.27□□□□□ -0.77
LIMS2-210ENST00000413578 MEPEQ9NQ76 525 aaPredicted RBP10.27□□□□□ -0.77
LIMS2-210ENST00000413578 PLEK2Q9NYT0 353 aa10.27□□□□□ -0.77
LIMS2-210ENST00000413578 SLC13A4Q9UKG4 626 aa10.27□□□□□ -0.77
LIMS2-210ENST00000413578 NUP50Q9UKX7 468 aa10.27□□□□□ -0.77
LIMS2-210ENST00000413578 USH1CQ9Y6N9 552 aa10.27□□□□□ -0.77
LIMS2-210ENST00000413578 ARHGAP32A7KAX9 2087 aa10.27□□□□□ -0.77
LIMS2-210ENST00000413578 NOTCH1P46531 2555 aa10.26□□□□□ -0.77
LIMS2-210ENST00000413578 VWFP04275 2813 aa10.26□□□□□ -0.77
LIMS2-210ENST00000413578 TRAPPC13A5PLN9 417 aa10.26□□□□□ -0.77
LIMS2-210ENST00000413578 CPSF4LA6NMK7 179 aaKnown RBP10.26□□□□□ -0.77
LIMS2-210ENST00000413578 POM121CA8CG34 1229 aa10.26□□□□□ -0.77
LIMS2-210ENST00000413578 H3BSA7 217 aa10.26□□□□□ -0.77
LIMS2-210ENST00000413578 TRMUO75648 421 aaKnown RBP10.26□□□□□ -0.77
LIMS2-210ENST00000413578 IGHMP01871 453 aa10.26□□□□□ -0.77
LIMS2-210ENST00000413578 OPN1SWP03999 348 aa10.26□□□□□ -0.77
LIMS2-210ENST00000413578 ZNF32P17041 273 aa10.26□□□□□ -0.77
LIMS2-210ENST00000413578 CD247P20963 164 aa10.26□□□□□ -0.77
LIMS2-210ENST00000413578 STOMP27105 288 aa10.26□□□□□ -0.77
LIMS2-210ENST00000413578 ATP4BP51164 291 aa10.26□□□□□ -0.77
LIMS2-210ENST00000413578 ZNF84P51523 738 aa10.26□□□□□ -0.77
LIMS2-210ENST00000413578 CLRN1P58418 232 aa10.26□□□□□ -0.77
LIMS2-210ENST00000413578 HSF2Q03933 536 aa10.26□□□□□ -0.77
LIMS2-210ENST00000413578 ZNF154Q13106 437 aa10.26□□□□□ -0.77
LIMS2-210ENST00000413578 OCLNQ16625 522 aa10.26□□□□□ -0.77
LIMS2-210ENST00000413578 ZNF718Q3SXZ3 478 aa10.26□□□□□ -0.77
LIMS2-210ENST00000413578 ARMC4Q5T2S8 1044 aa10.26□□□□□ -0.77
LIMS2-210ENST00000413578 TTC33Q6PID6 262 aaPredicted RBP10.26□□□□□ -0.77
LIMS2-210ENST00000413578 RFPL4BQ6ZWI9 263 aa10.26□□□□□ -0.77
LIMS2-210ENST00000413578 TREML1Q86YW5 311 aa10.26□□□□□ -0.77
LIMS2-210ENST00000413578 C1orf174Q8IYL3 243 aa10.26□□□□□ -0.77
LIMS2-210ENST00000413578 LRRC18Q8N456 261 aa10.26□□□□□ -0.77
LIMS2-210ENST00000413578 DUX5Q96PT3 197 aa10.26□□□□□ -0.77
LIMS2-210ENST00000413578 GPA33Q99795 319 aa10.26□□□□□ -0.77
LIMS2-210ENST00000413578 OR2J1Q9GZK6 312 aa10.26□□□□□ -0.77
LIMS2-210ENST00000413578 SLITRK2Q9H156 845 aa10.26□□□□□ -0.77
LIMS2-210ENST00000413578 SMURF2Q9HAU4 748 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms