RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 FOXF1Q12946 379 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 GLYR1Q49A26 553 aaPredicted RBP7.74□□□□□ -1.17
SYNE1-211ENST00000413186 SLC35D3Q5M8T2 416 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 ZNF704Q6ZNC4 412 aaPredicted RBP7.74□□□□□ -1.17
SYNE1-211ENST00000413186 ZFP82Q8N141 532 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 TOMM5Q8N4H5 51 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 ZNF721Q8TF20 911 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 S100A16Q96FQ6 103 aaKnown RBP7.74□□□□□ -1.17
SYNE1-211ENST00000413186 GAL3ST1Q99999 423 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 PIMREGQ9BSJ6 248 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 OPA3Q9H6K4 179 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 AKIRIN1Q9H9L7 192 aaPredicted RBP7.74□□□□□ -1.17
SYNE1-211ENST00000413186 DNAJB12Q9NXW2 375 aaKnown RBP7.74□□□□□ -1.17
SYNE1-211ENST00000413186 PLEK2Q9NYT0 353 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 GVINP1Q7Z2Y8 2422 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 TRGV5A0A0B4J1U4 118 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 ZNF587BE7ETH6 402 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 GDF9O60383 454 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 PRKACBP22694 351 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 ZNF117Q03924 483 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 RSPO4Q2I0M5 234 aaPredicted RBP7.74□□□□□ -1.17
SYNE1-211ENST00000413186 Q5PR19 223 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 FAHD1Q6P587 224 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 ZNF620Q6ZNG0 422 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 CREB3L2Q70SY1 520 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 ARMC10Q8N2F6 343 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 OR2V1Q8NHB1 315 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 APH1AQ96BI3 265 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 NIPSNAP1Q9BPW8 284 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 DUSP21Q9H596 190 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 POU2F3Q9UKI9 436 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 SLC7A11Q9UPY5 501 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 FKBP7Q9Y680 259 aa7.74□□□□□ -1.17
SYNE1-211ENST00000413186 A0A0B4J2E0 115 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 A0A1B0GX12 115 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 L7N2F9 121 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 MAGEB4O15481 346 aaPredicted RBP7.73□□□□□ -1.17
SYNE1-211ENST00000413186 AKR7A3O95154 331 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 IL2RAP01589 272 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 MLF1P58340 268 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 RHOBP62745 196 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 C4orf17Q53FE4 359 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 OXGR1Q96P68 337 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 ALG8Q9BVK2 526 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 MFRPQ9BY79 579 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 KCNIP2Q9NS61 270 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 DHDHQ9UQ10 334 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 TPRP12270 2363 aaKnown RBP7.73□□□□□ -1.17
SYNE1-211ENST00000413186 KANTRA0A1W2PQU2 76 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 PMS2P1A4D2B8 440 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 NGFRP08138 427 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 CT45A8P0DMV1 189 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 CT45A9P0DMV2 189 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 CD79AP11912 226 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 ADH6P28332 368 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 MEOX1P50221 254 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 SLC35A2P78381 396 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 ZNF91Q05481 1191 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 SPOCK1Q08629 439 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 SHBQ15464 509 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 CT45A2Q5DJT8 189 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 UBE2UQ5VVX9 321 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 HACD4Q5VWC8 232 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 GLT8D1Q68CQ7 371 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 FIP1L1Q6UN15 594 aaKnown RBP7.73□□□□□ -1.17
SYNE1-211ENST00000413186 KLBQ86Z14 1044 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 ENTHD1Q8IYW4 607 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 CLDN22Q8N7P3 220 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 PFN4Q8NHR9 129 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 CPT1CQ8TCG5 803 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 CPNE4Q96A23 557 aaPredicted RBP7.73□□□□□ -1.17
SYNE1-211ENST00000413186 CREB3L1Q96BA8 519 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 SPSB2Q99619 263 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 GALNT9Q9HCQ5 603 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 DIMT1Q9UNQ2 313 aaKnown RBP7.73□□□□□ -1.17
SYNE1-211ENST00000413186 C2orf16Q68DN1 1984 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 PRR19A6NJB7 356 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 NKX6-1P78426 367 aaPredicted RBP7.73□□□□□ -1.17
SYNE1-211ENST00000413186 CAMK2DQ13557 499 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 BCL2L15Q5TBC7 163 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 PEAR1Q5VY43 1037 aaPredicted RBP7.73□□□□□ -1.17
SYNE1-211ENST00000413186 ZNF585AQ6P3V2 769 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 SLC16A14Q7RTX9 510 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 ELMOD2Q8IZ81 293 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 INO80EQ8NBZ0 244 aaPredicted RBP7.73□□□□□ -1.17
SYNE1-211ENST00000413186 OR6Q1Q8NGQ2 317 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 CCDC107Q8WV48 283 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 TXN2Q99757 166 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 ALG12Q9BV10 488 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 ACTR6Q9GZN1 396 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 NIPAL2Q9H841 368 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 CALHM2Q9HA72 323 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 COPZ2Q9P299 210 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 HS3ST3B1Q9Y662 390 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 A0A1W2PS29 197 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 FAM183AA6NL82 134 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 LRRN3E7EW58 273 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 TO15178 435 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 CXCL13O43927 109 aa7.73□□□□□ -1.17
SYNE1-211ENST00000413186 SCGB1A1P11684 91 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms