RNA–Protein interactions for RNA: ENST00000413141.5

VPS41-204, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-204ENST00000413141 ACSM1Q08AH1 577 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 RNPS1Q15287 305 aaKnown RBP5.89□□□□□ -1.47
VPS41-204ENST00000413141 SSX1Q16384 188 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 TSTQ16762 297 aaKnown RBP5.89□□□□□ -1.47
VPS41-204ENST00000413141 MEP1BQ16820 701 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 CDONQ4KMG0 1287 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 ARMCX4Q5H9R4 360 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 PHYHD1Q5SRE7 291 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 C10orf128Q5T292 105 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 OTPQ5XKR4 325 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 FAM180AQ6UWF9 173 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 TMPRSS11AQ6ZMR5 421 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 SLC16A12Q6ZSM3 486 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 FOXL2NBQ6ZUU3 175 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 CHMP1BQ7LBR1 199 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 AAED1Q7RTV5 226 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 FGD2Q7Z6J4 655 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 ADGRE4PQ86SQ3 457 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 P2RY8Q86VZ1 359 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 C20orf196Q8IYI0 205 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 SYS1Q8N2H4 156 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 OR6N1Q8NGY5 312 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 OTOSQ8NHW6 89 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 GATAD2BQ8WXI9 593 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 NSMAFQ92636 917 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 MCHR2Q969V1 340 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 INTS12Q96CB8 462 aaKnown RBP5.89□□□□□ -1.47
VPS41-204ENST00000413141 C4orf36Q96KX1 117 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 GPR137Q96N19 417 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 DOK1Q99704 481 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 ARHGAP9Q9BRR9 750 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 PRRG4Q9BZD6 226 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 ULBP2Q9BZM5 246 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 YIPF3Q9GZM5 350 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 NAA50Q9GZZ1 169 aaKnown RBP5.89□□□□□ -1.47
VPS41-204ENST00000413141 ISG20L2Q9H9L3 353 aaKnown RBP5.89□□□□□ -1.47
VPS41-204ENST00000413141 RNF122Q9H9V4 155 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 BCO1Q9HAY6 547 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 ISYNA1Q9NPH2 558 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 ZNF71Q9NQZ8 489 aaPredicted RBP5.89□□□□□ -1.47
VPS41-204ENST00000413141 NDUFB11Q9NX14 153 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 GLTPQ9NZD2 209 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 EMC3Q9P0I2 261 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 CLCF1Q9UBD9 225 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 RSL24D1Q9UHA3 163 aaKnown RBP5.89□□□□□ -1.47
VPS41-204ENST00000413141 KCNG2Q9UJ96 466 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 UGT2A1Q9Y4X1 527 aa5.89□□□□□ -1.47
VPS41-204ENST00000413141 CACNA1GO43497 2377 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 BSNQ9UPA5 3926 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 H3BMQ9 156 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 ZNF593O00488 134 aaPredicted RBP5.88□□□□□ -1.47
VPS41-204ENST00000413141 ZNHIT1O43257 154 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 NOL3O60936 208 aaKnown RBP5.88□□□□□ -1.47
VPS41-204ENST00000413141 SS18L1O75177 396 aaPredicted RBP5.88□□□□□ -1.47
VPS41-204ENST00000413141 UPK3AO75631 287 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 MPZL1O95297 269 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 ABHD16AO95870 558 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 TGM6O95932 706 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 WNT11O96014 354 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 MT-ND5P03915 603 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 SPARCP09486 303 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 CPEP16870 476 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 ALOX5APP20292 161 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 EDNRAP25101 427 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 LAP3P28838 519 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 AGTR1P30556 359 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 RPS27P42677 84 aaKnown RBP5.88□□□□□ -1.47
VPS41-204ENST00000413141 GTF2A1P52655 376 aaPredicted RBP5.88□□□□□ -1.47
VPS41-204ENST00000413141 TMBIM6P55061 237 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 OR12D2P58182 307 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 EGR3Q06889 387 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 PCK2Q16822 640 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 ACSF3Q4G176 576 aaPredicted RBP5.88□□□□□ -1.47
VPS41-204ENST00000413141 TP53I3Q53FA7 332 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 TEX30Q5JUR7 227 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 ZNF684Q5T5D7 378 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 LIPKQ5VXJ0 399 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 ZNF324BQ6AW86 544 aaPredicted RBP5.88□□□□□ -1.47
VPS41-204ENST00000413141 SLC18B1Q6NT16 456 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 LRFN4Q6PJG9 635 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 C19orf48Q6RUI8 117 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 VASH1Q7L8A9 365 aaPredicted RBP5.88□□□□□ -1.47
VPS41-204ENST00000413141 DPY19L4Q7Z388 723 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.88□□□□□ -1.47
VPS41-204ENST00000413141 ATCAYQ86WG3 371 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 ANKRD13BQ86YJ7 626 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 KLBQ86Z14 1044 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 MCEMP1Q8IX19 187 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 TUSC5Q8IXB3 177 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 PHC2Q8IXK0 858 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 OR10H5Q8NGA6 315 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 RAB2BQ8WUD1 216 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 SNX33Q8WV41 574 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 ASB17Q8WXJ9 295 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 C11orf40Q8WZ69 217 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 UFD1Q92890 307 aa5.88□□□□□ -1.47
VPS41-204ENST00000413141 ZNF775Q96BV0 537 aaPredicted RBP5.88□□□□□ -1.47
VPS41-204ENST00000413141 C12orf43Q96C57 262 aaKnown RBP5.88□□□□□ -1.47
VPS41-204ENST00000413141 DGCR14Q96DF8 476 aaKnown RBP5.88□□□□□ -1.47
VPS41-204ENST00000413141 MRPL48Q96GC5 212 aaKnown RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms