RNA–Protein interactions for RNA: ENST00000412640.6

SOX9-AS1-201, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 635 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-201ENST00000412640 ERGIC3Q9Y282 383 aa8.43□□□□□ -1.06
SOX9-AS1-201ENST00000412640 EXOSC1Q9Y3B2 195 aaKnown RBP8.43□□□□□ -1.06
SOX9-AS1-201ENST00000412640 A0A087WZY1 265 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 FTCDNL1E5RQL4 147 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 PRR23D1E9PI22 279 aaPredicted RBP8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 SLC22A1O15245 554 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 OR2T1O43869 369 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 SCG5P05408 212 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 CD14P08571 375 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 PRR23D2P0DMB1 279 aaPredicted RBP8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 TMIGD3P0DMS9 266 aaPredicted RBP8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 CCNA2P20248 432 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 PAICSP22234 425 aaKnown RBP8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 FKBP2P26885 142 aaKnown RBP8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 LIPAP38571 399 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 FAM27E3Q08E93 113 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 POU4F2Q12837 409 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 CRMP1Q14194 572 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 GGTLC2Q14390 218 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 MFSD13AQ14CX5 517 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 SPHARQ15513 63 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 SGCBQ16585 318 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 TMEM249Q2WGJ8 235 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 PLPPR5Q32ZL2 321 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 MIDNQ504T8 468 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 SLC35F1Q5T1Q4 408 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 C1orf140Q5VVS0 124 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 NSUN5P2Q63ZY6 315 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 BICRALQ6AI39 1079 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 GPR139Q6DWJ6 353 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 VASNQ6EMK4 673 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 PLBD1Q6P4A8 553 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 P2RY8Q86VZ1 359 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 SLC37A3Q8NCC5 494 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 ZNF485Q8NCK3 441 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 NPEPL1Q8NDH3 523 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 BBS1Q8NFJ9 593 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 MOSPD2Q8NHP6 518 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 NEIL3Q8TAT5 605 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 ZC3HAV1LQ96H79 300 aaKnown RBP8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 ERMAPQ96PL5 475 aaPredicted RBP8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 OR5M11Q96RB7 305 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 SNX18Q96RF0 628 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 TEAD3Q99594 435 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 MGLLQ99685 303 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 MED18Q9BUE0 208 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 HCAR1Q9BXC0 346 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 POTEKPQ9BYX7 375 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 SLCO5A1Q9H2Y9 848 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 PROK2Q9HC23 129 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 FANCFQ9NPI8 374 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 INPP5EQ9NRR6 644 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 MRPL39Q9NYK5 338 aaKnown RBP8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 TAS2R16Q9NYV7 291 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 MED11Q9P086 117 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 IER3IP1Q9Y5U9 82 aa8.42□□□□□ -1.06
SOX9-AS1-201ENST00000412640 TRRAPQ9Y4A5 3859 aa8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 PCNX3Q9H6A9 2034 aa8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 ZC3H12DA2A288 527 aaKnown RBP8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 NPIPB13A6NJU9 1138 aa8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 FAM183AA6NL82 134 aa8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 NPIPB4C9JG80 1138 aa8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 SNX4O95219 450 aa8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 AHSA1O95433 338 aa8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 IL18BPO95998 194 aa8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 PLAUP00749 431 aa8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 IGHMP01871 453 aa8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 HIST1H2ABP04908 130 aa8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 LIMS3P0CW19 117 aa8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 LIMS4P0CW20 117 aa8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 HIST1H1CP16403 213 aaKnown RBP8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 CD36P16671 472 aa8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 MYL12AP19105 171 aa8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 NOS3P29474 1203 aa8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 SDHAP31040 664 aa8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 RPL4P36578 427 aaKnown RBP8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 AQP2P41181 271 aa8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 EIF1P41567 113 aaKnown RBP8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 RPS5P46782 204 aaKnown RBP8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 RGS6P49758 472 aa8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 CLK1P49759 484 aaKnown RBP8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 ETV1P50549 477 aa8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 SLC25A1P53007 311 aa8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 RPL18Q07020 188 aaKnown RBP8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 ACSM1Q08AH1 577 aa8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 ZP4Q12836 540 aa8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 MLLT11Q13015 90 aaPredicted RBP8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 ETFDHQ16134 617 aa8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 ALG10Q5BKT4 473 aa8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 ARMCX4Q5H9R4 360 aa8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 SLC35D3Q5M8T2 416 aa8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 SLC22A10Q63ZE4 541 aa8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 OR5M10Q6IEU7 315 aa8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 HIST3H2AQ7L7L0 130 aa8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 NANOGNBQ7Z5D8 188 aa8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 LSRQ86X29 649 aaPredicted RBP8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 PLCZ1Q86YW0 608 aa8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 C3orf56Q8N813 242 aa8.41□□□□□ -1.06
SOX9-AS1-201ENST00000412640 SCAIQ8N9R8 606 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms