RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 TRIM36Q9NQ86 728 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 MRPL22Q9NWU5 206 aaKnown RBP4.92□□□□□ -1.62
EPHA4-202ENST00000409854 KCNMB2Q9Y691 235 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 ARHGAP21Q5T5U3 1957 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 FAM171A2A8MVW0 826 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 PRR32B1ATL7 298 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 ZNF670-ZNF695F2Z2N8 137 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 PHYHO14832 338 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 SMAD9O15198 467 aaKnown RBP4.92□□□□□ -1.62
EPHA4-202ENST00000409854 OGG1O15527 345 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 PLPP2O43688 288 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 PRKACAP17612 351 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 LHX2P50458 406 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 SUCLG1P53597 346 aaKnown RBP4.92□□□□□ -1.62
EPHA4-202ENST00000409854 HCCSP53701 268 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 CLDN20P56880 219 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 RPS3AP61247 264 aaKnown RBP4.92□□□□□ -1.62
EPHA4-202ENST00000409854 LSM3P62310 102 aaKnown RBP4.92□□□□□ -1.62
EPHA4-202ENST00000409854 RPS25P62851 125 aaKnown RBP4.92□□□□□ -1.62
EPHA4-202ENST00000409854 SLC17A1Q14916 467 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 TMEM95Q3KNT9 176 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 TEX30Q5JUR7 227 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 DNM1P34Q6PK57 102 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 ZNF704Q6ZNC4 412 aaPredicted RBP4.92□□□□□ -1.62
EPHA4-202ENST00000409854 GALNTL5Q7Z4T8 443 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 TMEM251Q8N6I4 163 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 KBTBD8Q8NFY9 601 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 LILRB4Q8NHJ6 448 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 SNIP1Q8TAD8 396 aaKnown RBP4.92□□□□□ -1.62
EPHA4-202ENST00000409854 MRPL48Q96GC5 212 aaKnown RBP4.92□□□□□ -1.62
EPHA4-202ENST00000409854 SLC25A44Q96H78 314 aaPredicted RBP4.92□□□□□ -1.62
EPHA4-202ENST00000409854 SMAD5Q99717 465 aaKnown RBP4.92□□□□□ -1.62
EPHA4-202ENST00000409854 CHCHD6Q9BRQ6 235 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 WDR76Q9H967 626 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 SIAEQ9HAT2 523 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 ACKR4Q9NPB9 350 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 CCDC59Q9P031 241 aaKnown RBP4.92□□□□□ -1.62
EPHA4-202ENST00000409854 ST6GALNAC2Q9UJ37 374 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 KLHDC2Q9Y2U9 406 aa4.92□□□□□ -1.62
EPHA4-202ENST00000409854 SIRT4Q9Y6E7 314 aaPredicted RBP4.92□□□□□ -1.62
EPHA4-202ENST00000409854 TRDV1A0A1B0GX56 115 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 DCDC2BA2VCK2 349 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 A6NL46 340 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 HSPB2A8KAH6 182 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 TLX3O43711 291 aaPredicted RBP4.91□□□□□ -1.62
EPHA4-202ENST00000409854 SLC16A7O60669 478 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 ABHD16AO95870 558 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 HRGP04196 525 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 ALOX5APP20292 161 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 VAMP1P23763 118 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 MAGEA5P43359 124 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 OR12D2P58182 307 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 CD83Q01151 205 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 EGR3Q06889 387 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 TOMM20Q15388 145 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 HSPB2Q16082 182 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 Q3ZCU0 254 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 CCDC58Q4VC31 144 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 SOWAHCQ53LP3 525 aaPredicted RBP4.91□□□□□ -1.62
EPHA4-202ENST00000409854 ZNF766Q5HY98 468 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 THEM4Q5T1C6 240 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 DMKNQ6E0U4 476 aaPredicted RBP4.91□□□□□ -1.62
EPHA4-202ENST00000409854 TMEM225Q6GV28 225 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 CREB3L2Q70SY1 520 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 TRILQ7L0X0 811 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 KCTD20Q7Z5Y7 419 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 TMEM178AQ8NBL3 297 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 MINDY2Q8NBR6 621 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 SLC26A10Q8NG04 563 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 OR2V1Q8NHB1 315 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 OTOSQ8NHW6 89 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 TBC1D15Q8TC07 691 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 HAVCR2Q8TDQ0 301 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 ZHX1-C8orf76Q96EF9 292 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 PELI1Q96FA3 418 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 PGLYRP3Q96LB9 341 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 SLIRPQ9GZT3 109 aaKnown RBP4.91□□□□□ -1.62
EPHA4-202ENST00000409854 NXF2Q9GZY0 626 aaKnown RBP4.91□□□□□ -1.62
EPHA4-202ENST00000409854 DCSTAMPQ9H295 470 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 RNF167Q9H6Y7 350 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 TXNL4BQ9NX01 149 aaKnown RBP4.91□□□□□ -1.62
EPHA4-202ENST00000409854 KLHL9Q9P2J3 617 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 TMEM14AQ9Y6G1 99 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 PMF1-BGLAPU3KQ54 211 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 URB1O60287 2271 aaKnown RBP4.91□□□□□ -1.62
EPHA4-202ENST00000409854 IGKV1D-43A0A0B4J1Z2 117 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 SLC35F4A4IF30 521 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 ZNF716A6NP11 495 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 E9PI62 339 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 KHDRBS3O75525 346 aaKnown RBP4.91□□□□□ -1.62
EPHA4-202ENST00000409854 SC5DO75845 299 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 TRAPPC6AO75865 159 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 SULT1C4O75897 302 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 ZNF432O94892 652 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 IGHG1P01857 330 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 CELA3AP09093 270 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 ZNF708P17019 499 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 ZNF43P17038 809 aa4.91□□□□□ -1.62
EPHA4-202ENST00000409854 POU3F2P20265 443 aaPredicted RBP4.91□□□□□ -1.62
EPHA4-202ENST00000409854 TGM4P49221 684 aa4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms