RNA–Protein interactions for RNA: ENST00000409494.5

PCDHA13-202, Transcript of protocadherin alpha 13, humanhuman

TSL 1 (best) BASIC

Gene PCDHA13, Length 4,884 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA13-202ENST00000409494 PTBP1P26599 531 aaKnown RBP eCLIP15.31■□□□□ 0.04
PCDHA13-202ENST00000409494 GIFP27352 417 aa15.31■□□□□ 0.04
PCDHA13-202ENST00000409494 CLN3Q13286 438 aa15.31■□□□□ 0.04
PCDHA13-202ENST00000409494 ACKR1Q16570 336 aa15.31■□□□□ 0.04
PCDHA13-202ENST00000409494 COMMD7Q86VX2 200 aa15.31■□□□□ 0.04
PCDHA13-202ENST00000409494 ELMOD3Q96FG2 381 aa15.31■□□□□ 0.04
PCDHA13-202ENST00000409494 OPA3Q9H6K4 179 aa15.31■□□□□ 0.04
PCDHA13-202ENST00000409494 SYNPO2LQ9H987 977 aa15.31■□□□□ 0.04
PCDHA13-202ENST00000409494 NTN4Q9HB63 628 aa15.31■□□□□ 0.04
PCDHA13-202ENST00000409494 NDRG3Q9UGV2 375 aa15.31■□□□□ 0.04
PCDHA13-202ENST00000409494 R4GN57 208 aa15.31■□□□□ 0.04
PCDHA13-202ENST00000409494 ZAR1LA6NP61 321 aa15.31■□□□□ 0.04
PCDHA13-202ENST00000409494 SC5DO75845 299 aa15.31■□□□□ 0.04
PCDHA13-202ENST00000409494 S100A7P31151 101 aa15.31■□□□□ 0.04
PCDHA13-202ENST00000409494 TMEM179BQ7Z7N9 219 aa15.31■□□□□ 0.04
PCDHA13-202ENST00000409494 S100A7AQ86SG5 101 aa15.31■□□□□ 0.04
PCDHA13-202ENST00000409494 ZNF695Q8IW36 515 aa15.31■□□□□ 0.04
PCDHA13-202ENST00000409494 DNAJC5GQ8N7S2 189 aa15.31■□□□□ 0.04
PCDHA13-202ENST00000409494 CNTRLQ7Z7A1 2325 aa15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 SULT1C4O75897 302 aa15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 APEX1P27695 318 aaKnown RBP15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 LAP3P28838 519 aa15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 EGR3Q06889 387 aa15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 CATR1Q13166 79 aa15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 GALEQ14376 348 aa15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 CPEB4Q17RY0 729 aaKnown RBP eCLIP15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 PMS2CLQ68D20 193 aa15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 ZNF687Q8N1G0 1237 aa15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 OR13C9Q8NGT0 318 aa15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 LIPHQ8WWY8 451 aa15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 CLEC2DQ9UHP7 191 aa15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 PARP14Q460N5 1801 aa15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 NKX6-3A6NJ46 265 aa15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 H7C1C5 153 aa15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 IFNA1P01562 189 aa15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 CD1EP15812 388 aa15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 UQCRC1P31930 480 aa15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 LCN6P62502 163 aa15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 FOXC1Q12948 553 aa15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 TOMM34Q15785 309 aaPredicted RBP15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 C9orf135Q5VTT2 229 aa15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 OR51A2Q8NGJ7 313 aa15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 ARHGDIGQ99819 225 aa15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 MED20Q9H944 212 aa15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 COA3Q9Y2R0 106 aaPredicted RBP15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 NRG2O14511 850 aaPredicted RBP15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 SOCS6O14544 535 aa15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 NCR1O76036 304 aa15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 APOC3P02656 99 aa15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 ALDOBP05062 364 aa15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 ECI1P42126 302 aa15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 ZNF133P52736 654 aaPredicted RBP15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 P2RY14Q15391 338 aa15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 OR4K15Q8NH41 348 aa15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 ZNF845Q96IR2 970 aaPredicted RBP15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 ZNF768Q9H5H4 540 aaKnown RBP15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 RAB22AQ9UL26 194 aa15.3■□□□□ 0.04
PCDHA13-202ENST00000409494 SLC33A1O00400 549 aaPredicted RBP15.29■□□□□ 0.04
PCDHA13-202ENST00000409494 XRCC2O43543 280 aa15.29■□□□□ 0.04
PCDHA13-202ENST00000409494 FOLR1P15328 257 aa15.29■□□□□ 0.04
PCDHA13-202ENST00000409494 AKR1C4P17516 323 aa15.29■□□□□ 0.04
PCDHA13-202ENST00000409494 MSMO1Q15800 293 aa15.29■□□□□ 0.04
PCDHA13-202ENST00000409494 DCXRQ7Z4W1 244 aa15.29■□□□□ 0.04
PCDHA13-202ENST00000409494 ZNF511Q8NB15 262 aa15.29■□□□□ 0.04
PCDHA13-202ENST00000409494 OR2M2Q96R28 347 aa15.29■□□□□ 0.04
PCDHA13-202ENST00000409494 MRPS28Q9Y2Q9 187 aaKnown RBP15.29■□□□□ 0.04
PCDHA13-202ENST00000409494 SLC22A23A1A5C7 686 aa15.29■□□□□ 0.04
PCDHA13-202ENST00000409494 ARPC1BO15143 372 aaKnown RBP15.29■□□□□ 0.04
PCDHA13-202ENST00000409494 ESPNLQ6ZVH7 1005 aa15.29■□□□□ 0.04
PCDHA13-202ENST00000409494 USP51Q70EK9 711 aa15.29■□□□□ 0.04
PCDHA13-202ENST00000409494 DEFB124Q8NES8 71 aa15.29■□□□□ 0.04
PCDHA13-202ENST00000409494 ZNF775Q96BV0 537 aaPredicted RBP15.29■□□□□ 0.04
PCDHA13-202ENST00000409494 RASD2Q96D21 266 aa15.29■□□□□ 0.04
PCDHA13-202ENST00000409494 ZC3H10Q96K80 434 aaKnown RBP15.29■□□□□ 0.04
PCDHA13-202ENST00000409494 RGS11O94810 467 aa15.29■□□□□ 0.04
PCDHA13-202ENST00000409494 RPS19P39019 145 aaKnown RBP15.29■□□□□ 0.04
PCDHA13-202ENST00000409494 LSSP48449 732 aa15.29■□□□□ 0.04
PCDHA13-202ENST00000409494 UBE2IP63279 158 aaKnown RBP15.29■□□□□ 0.04
PCDHA13-202ENST00000409494 BCDIN3DQ7Z5W3 292 aaKnown RBP15.29■□□□□ 0.04
PCDHA13-202ENST00000409494 PFN4Q8NHR9 129 aa15.29■□□□□ 0.04
PCDHA13-202ENST00000409494 M1APQ8TC57 530 aa15.29■□□□□ 0.04
PCDHA13-202ENST00000409494 STEAP1Q9UHE8 339 aa15.29■□□□□ 0.04
PCDHA13-202ENST00000409494 UGT2A1Q9Y4X1 527 aa15.29■□□□□ 0.04
PCDHA13-202ENST00000409494 KLK10O43240 276 aa15.29■□□□□ 0.04
PCDHA13-202ENST00000409494 CRYAAP02489 173 aa15.29■□□□□ 0.04
PCDHA13-202ENST00000409494 QDPRP09417 244 aa15.29■□□□□ 0.04
PCDHA13-202ENST00000409494 CTSFQ9UBX1 484 aa15.29■□□□□ 0.04
PCDHA13-202ENST00000409494 POLDIP2Q9Y2S7 368 aa15.29■□□□□ 0.04
PCDHA13-202ENST00000409494 CASP8AP2Q9UKL3 1982 aa15.29■□□□□ 0.04
PCDHA13-202ENST00000409494 SERPINA2P20848 420 aa15.28■□□□□ 0.04
PCDHA13-202ENST00000409494 CX3CR1P49238 355 aa15.28■□□□□ 0.04
PCDHA13-202ENST00000409494 PCBP4P57723 403 aaKnown RBP15.28■□□□□ 0.04
PCDHA13-202ENST00000409494 RPL18Q07020 188 aaKnown RBP15.28■□□□□ 0.04
PCDHA13-202ENST00000409494 SLC14A1Q13336 389 aa15.28■□□□□ 0.04
PCDHA13-202ENST00000409494 VN1R4Q7Z5H5 301 aa15.28■□□□□ 0.04
PCDHA13-202ENST00000409494 ANKRD37Q7Z713 158 aa15.28■□□□□ 0.04
PCDHA13-202ENST00000409494 OR2Y1Q8NGV0 311 aa15.28■□□□□ 0.04
PCDHA13-202ENST00000409494 KCNJ15Q99712 375 aa15.28■□□□□ 0.04
PCDHA13-202ENST00000409494 RTL8AQ9BWD3 113 aa15.28■□□□□ 0.04
PCDHA13-202ENST00000409494 CDCA4Q9BXL8 241 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms