RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 ABHD16AO95870 558 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 WNT11O96014 354 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 PEX19P40855 299 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 SELENOPP49908 381 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 GBX2P52951 348 aaPredicted RBP12.48□□□□□ -0.41
GPNMB-203ENST00000409458 SH3BGRP55822 239 aaPredicted RBP12.48□□□□□ -0.41
GPNMB-203ENST00000409458 GPR50Q13585 617 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 C3AR1Q16581 482 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 PHYHD1Q5SRE7 291 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 DMKNQ6E0U4 476 aaPredicted RBP12.48□□□□□ -0.41
GPNMB-203ENST00000409458 C22orf42Q6IC83 251 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 CD200R1LQ6Q8B3 271 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 FCRLAQ7L513 359 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 GLB1L2Q8IW92 636 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 MEIOBQ8N635 442 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 THEM6Q8WUY1 208 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 TMEM54Q969K7 222 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 RNF166Q96A37 237 aaPredicted RBP12.48□□□□□ -0.41
GPNMB-203ENST00000409458 PGLYRP3Q96LB9 341 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 LDAHQ9H6V9 325 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 SPRR3Q9UBC9 169 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 FLVCR1Q9Y5Y0 555 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 TMEM14AQ9Y6G1 99 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 SPTBN2O15020 2390 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 A0A1W2PPL8 197 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 CENPBD1B2RD01 187 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 PHYHO14832 338 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 TFECO14948 347 aaPredicted RBP12.48□□□□□ -0.41
GPNMB-203ENST00000409458 PLPP2O43688 288 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 ZNF432O94892 652 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 ACTL6AO96019 429 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 QDPRP09417 244 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 ZNF24P17028 368 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 CSNK1A1P48729 337 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 EGR3Q06889 387 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 SLC3A1Q07837 685 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 INSL4Q14641 139 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 CDK5R1Q15078 307 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 SLC18B1Q6NT16 456 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 LRFN4Q6PJG9 635 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 PLXDC2Q6UX71 529 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 ABHD3Q8WU67 409 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 C11orf40Q8WZ69 217 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 ZNF775Q96BV0 537 aaPredicted RBP12.48□□□□□ -0.41
GPNMB-203ENST00000409458 GLTPQ9NZD2 209 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 KLHL9Q9P2J3 617 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 IKZF2Q9UKS7 526 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 PMF1-BGLAPU3KQ54 211 aa12.48□□□□□ -0.41
GPNMB-203ENST00000409458 TRGV5A0A0B4J1U4 118 aa12.47□□□□□ -0.41
GPNMB-203ENST00000409458 TRDV1A0A1B0GX56 115 aa12.47□□□□□ -0.41
GPNMB-203ENST00000409458 METTL15A6NJ78 407 aa12.47□□□□□ -0.41
GPNMB-203ENST00000409458 CD8B2A6NJW9 211 aa12.47□□□□□ -0.41
GPNMB-203ENST00000409458 VGLL3A8MV65 326 aa12.47□□□□□ -0.41
GPNMB-203ENST00000409458 GABRPO00591 440 aa12.47□□□□□ -0.41
GPNMB-203ENST00000409458 OGG1O15527 345 aa12.47□□□□□ -0.41
GPNMB-203ENST00000409458 UPK3AO75631 287 aa12.47□□□□□ -0.41
GPNMB-203ENST00000409458 SLC34A2O95436 690 aa12.47□□□□□ -0.41
GPNMB-203ENST00000409458 PDGFAP04085 211 aa12.47□□□□□ -0.41
GPNMB-203ENST00000409458 HRGP04196 525 aa12.47□□□□□ -0.41
GPNMB-203ENST00000409458 KRT8P05787 483 aa12.47□□□□□ -0.41
GPNMB-203ENST00000409458 CD8BP10966 210 aa12.47□□□□□ -0.41
GPNMB-203ENST00000409458 ZNF823P16415 610 aa12.47□□□□□ -0.41
GPNMB-203ENST00000409458 EDNRAP25101 427 aa12.47□□□□□ -0.41
GPNMB-203ENST00000409458 LAP3P28838 519 aa12.47□□□□□ -0.41
GPNMB-203ENST00000409458 CDAP32320 146 aa12.47□□□□□ -0.41
GPNMB-203ENST00000409458 NTF4P34130 210 aa12.47□□□□□ -0.41
GPNMB-203ENST00000409458 TUBA1BP68363 451 aa12.47□□□□□ -0.41
GPNMB-203ENST00000409458 SIRPAP78324 504 aa12.47□□□□□ -0.41
GPNMB-203ENST00000409458 RASGEF1BQ0VAM2 473 aa12.47□□□□□ -0.41
GPNMB-203ENST00000409458 EIF2B1Q14232 305 aaKnown RBP12.47□□□□□ -0.41
GPNMB-203ENST00000409458 BCL2A1Q16548 175 aa12.47□□□□□ -0.41
GPNMB-203ENST00000409458 PCK2Q16822 640 aa12.47□□□□□ -0.41
GPNMB-203ENST00000409458 IGFL3Q6UXB1 125 aa12.47□□□□□ -0.41
GPNMB-203ENST00000409458 TUBA1AQ71U36 451 aa12.47□□□□□ -0.41
GPNMB-203ENST00000409458 FAM220AQ7Z4H9 259 aa12.47□□□□□ -0.41
GPNMB-203ENST00000409458 ZADH2Q8N4Q0 377 aa12.47□□□□□ -0.41
GPNMB-203ENST00000409458 YIPF7Q8N8F6 280 aa12.47□□□□□ -0.41
GPNMB-203ENST00000409458 TBC1D15Q8TC07 691 aa12.47□□□□□ -0.41
GPNMB-203ENST00000409458 FNDC8Q8TC99 324 aa12.47□□□□□ -0.41
GPNMB-203ENST00000409458 SMIM19Q96E16 107 aa12.47□□□□□ -0.41
GPNMB-203ENST00000409458 OR8B4Q96RC9 309 aa12.47□□□□□ -0.41
GPNMB-203ENST00000409458 MYCBPQ99417 103 aaPredicted RBP12.47□□□□□ -0.41
GPNMB-203ENST00000409458 HDHD5Q9BXW7 423 aa12.47□□□□□ -0.41
GPNMB-203ENST00000409458 SLIRPQ9GZT3 109 aaKnown RBP12.47□□□□□ -0.41
GPNMB-203ENST00000409458 EXO5Q9H790 373 aa12.47□□□□□ -0.41
GPNMB-203ENST00000409458 SLCO1C1Q9NYB5 712 aa12.47□□□□□ -0.41
GPNMB-203ENST00000409458 FOXD3Q9UJU5 478 aaPredicted RBP12.47□□□□□ -0.41
GPNMB-203ENST00000409458 PCDHGA9Q9Y5G4 932 aaKnown RBP12.47□□□□□ -0.41
GPNMB-203ENST00000409458 LAMA5O15230 3695 aa12.47□□□□□ -0.41
GPNMB-203ENST00000409458 SPENQ96T58 3664 aaKnown RBP12.47□□□□□ -0.41
GPNMB-203ENST00000409458 ZNF407Q9C0G0 2248 aa12.47□□□□□ -0.41
GPNMB-203ENST00000409458 DVL2O14641 736 aa12.46□□□□□ -0.41
GPNMB-203ENST00000409458 SULT1C4O75897 302 aa12.46□□□□□ -0.41
GPNMB-203ENST00000409458 RGS9O75916 674 aaPredicted RBP12.46□□□□□ -0.41
GPNMB-203ENST00000409458 RPP14O95059 124 aaKnown RBP12.46□□□□□ -0.41
GPNMB-203ENST00000409458 HLA-DPB1P04440 258 aa12.46□□□□□ -0.41
GPNMB-203ENST00000409458 CD53P19397 219 aa12.46□□□□□ -0.41
GPNMB-203ENST00000409458 EIF2S3P41091 472 aaKnown RBP12.46□□□□□ -0.41
GPNMB-203ENST00000409458 GDI2P50395 445 aaKnown RBP12.46□□□□□ -0.41
GPNMB-203ENST00000409458 NANOS3P60323 173 aaKnown RBP12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms