RNA–Protein interactions for RNA: ENST00000406881.3

PCDH11X-207, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,156 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-207ENST00000406881 BORCS7-ASMTA0A0B4J1R7 106 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 TCRBV16S1A1N1A0A5B0 115 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 FFAR1O14842 300 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 ARPC1BO15143 372 aaKnown RBP4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 FOXS1O43638 330 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 SEMG1P04279 462 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 PCMT1P22061 227 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 CDK2P24941 298 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 GIFP27352 417 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 GDNFP39905 211 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 TAS2R46P59540 309 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 FABP5Q01469 135 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 ZNF117Q03924 483 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 CDC20Q12834 499 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 FOXF1Q12946 379 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 DOC2BQ14184 412 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 ZXDCQ2QGD7 858 aaPredicted RBP4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 DEGS2Q6QHC5 323 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 NOXA1Q86UR1 476 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 CCDC28AQ8IWP9 274 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 C17orf47Q8NEP4 570 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 OR4M1Q8NGD0 313 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 OR13C9Q8NGT0 318 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 OR6S1Q8NH40 331 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 APH1BQ8WW43 257 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 DNASE2BQ8WZ79 361 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 FAM3DQ96BQ1 224 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 SLAMF6Q96DU3 332 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 FAM122AQ96E09 287 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 FOXN4Q96NZ1 517 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 MICU1Q9BPX6 476 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 EDEM2Q9BV94 578 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 OR11A1Q9GZK7 315 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 SLA2Q9H6Q3 261 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 NOX3Q9HBY0 568 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 APMAPQ9HDC9 416 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 PLEKHJ1Q9NW61 149 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 NTMQ9P121 344 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 KLHL13Q9P2N7 655 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 LHX6Q9UPM6 363 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 RCE1Q9Y256 329 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 ALG5Q9Y673 324 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 R4GMQ9 66 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 ZNF646O15015 1829 aaPredicted RBP4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 C2orf72A6NCS6 295 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 A6NLC8 198 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 A8MV72 311 aaPredicted RBP4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 B4DXG7 233 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 E9PI62 339 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 GABARAPH6UMI1 98 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 AIPO00170 330 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 P2RY10O00398 339 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 PEX14O75381 377 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 FUCA1P04066 466 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 NGFRP08138 427 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 CPT2P23786 658 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 GCH1P30793 250 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 EVX1P49640 407 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 EFNA3P52797 238 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 RAP2BP61225 183 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 RBMS2Q15434 407 aaKnown RBP4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 TATDN3Q17R31 274 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 ZNF684Q5T5D7 378 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 ZNF813Q6ZN06 617 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 ESPNLQ6ZVH7 1005 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 LINC00346Q8IVM7 164 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 NLGN4YQ8NFZ3 816 aaPredicted RBP4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 TXNDC15Q96J42 360 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 ARL5BQ96KC2 179 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 WDFY2Q96P53 400 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 OR8B4Q96RC9 309 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 SPIN2AQ99865 258 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 SPIN2BQ9BPZ2 258 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 PDCD1LG2Q9BQ51 273 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 TMEM59Q9BXS4 323 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 MRPS18AQ9NVS2 196 aaKnown RBP4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 UBQLN2Q9UHD9 624 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 TRAPPC4Q9Y296 219 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 MRPS28Q9Y2Q9 187 aaKnown RBP4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 PCDHGA5Q9Y5G8 931 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 A0A0A6YYH2 397 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 A6NJ64 397 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 F5H5P2 479 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 G3V3Y1 287 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 NRG2O14511 850 aaPredicted RBP4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 STK17BO94768 372 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 SLC34A2O95436 690 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 MT-CO3P00414 261 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 PLATP00750 562 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 FCER2P06734 321 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 LIMS3P0CW19 117 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 LIMS4P0CW20 117 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 ZNF35P13682 527 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 LSSP48449 732 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 S100A10P60903 97 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 CXADRP78310 365 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 RBPJQ06330 500 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 PMS2CLQ68D20 193 aa4.3□□□□□ -1.72
PCDH11X-207ENST00000406881 NPSR1Q6W5P4 371 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms