RNA–Protein interactions for RNA: ENST00000406335.1

RHBDD3-202, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-202ENST00000406335 USP43Q70EL4 1123 aa18.06■□□□□ 0.48
RHBDD3-202ENST00000406335 BPIFB2Q8N4F0 458 aa18.06■□□□□ 0.48
RHBDD3-202ENST00000406335 OR6X1Q8NH79 312 aa18.06■□□□□ 0.48
RHBDD3-202ENST00000406335 LZICQ8WZA0 190 aa18.06■□□□□ 0.48
RHBDD3-202ENST00000406335 TMEM54Q969K7 222 aa18.06■□□□□ 0.48
RHBDD3-202ENST00000406335 CMTM5Q96DZ9 223 aa18.06■□□□□ 0.48
RHBDD3-202ENST00000406335 SGTBQ96EQ0 304 aa18.06■□□□□ 0.48
RHBDD3-202ENST00000406335 PRRC1Q96M27 445 aa18.06■□□□□ 0.48
RHBDD3-202ENST00000406335 RHCGQ9UBD6 479 aa18.06■□□□□ 0.48
RHBDD3-202ENST00000406335 ABCD2Q9UBJ2 740 aa18.06■□□□□ 0.48
RHBDD3-202ENST00000406335 ZNF346Q9UL40 294 aaKnown RBP18.06■□□□□ 0.48
RHBDD3-202ENST00000406335 CDC14BO60729 498 aa18.05■□□□□ 0.48
RHBDD3-202ENST00000406335 F13BP05160 661 aa18.05■□□□□ 0.48
RHBDD3-202ENST00000406335 THRBP10828 461 aa18.05■□□□□ 0.48
RHBDD3-202ENST00000406335 B4GALT1P15291 398 aa18.05■□□□□ 0.48
RHBDD3-202ENST00000406335 AQP2P41181 271 aa18.05■□□□□ 0.48
RHBDD3-202ENST00000406335 MVKQ03426 396 aa18.05■□□□□ 0.48
RHBDD3-202ENST00000406335 CBLL1Q75N03 491 aa18.05■□□□□ 0.48
RHBDD3-202ENST00000406335 LRP11Q86VZ4 500 aa18.05■□□□□ 0.48
RHBDD3-202ENST00000406335 YIPF5Q969M3 257 aa18.05■□□□□ 0.48
RHBDD3-202ENST00000406335 FOXB1Q99853 325 aa18.05■□□□□ 0.48
RHBDD3-202ENST00000406335 KCTD14Q9BQ13 255 aaPredicted RBP18.05■□□□□ 0.48
RHBDD3-202ENST00000406335 GLTPQ9NZD2 209 aa18.05■□□□□ 0.48
RHBDD3-202ENST00000406335 GPR160Q9UJ42 338 aa18.05■□□□□ 0.48
RHBDD3-202ENST00000406335 MED31Q9Y3C7 131 aa18.05■□□□□ 0.48
RHBDD3-202ENST00000406335 FFAR1O14842 300 aa18.04■□□□□ 0.48
RHBDD3-202ENST00000406335 TPD52L2O43399 206 aaKnown RBP18.04■□□□□ 0.48
RHBDD3-202ENST00000406335 MPZL1O95297 269 aa18.04■□□□□ 0.48
RHBDD3-202ENST00000406335 SERPINA1P01009 418 aa18.04■□□□□ 0.48
RHBDD3-202ENST00000406335 ZNF35P13682 527 aa18.04■□□□□ 0.48
RHBDD3-202ENST00000406335 PRDX6P30041 224 aa18.04■□□□□ 0.48
RHBDD3-202ENST00000406335 GIPRP48546 466 aa18.04■□□□□ 0.48
RHBDD3-202ENST00000406335 RAB1AP62820 205 aa18.04■□□□□ 0.48
RHBDD3-202ENST00000406335 ST3GAL3Q11203 375 aa18.04■□□□□ 0.48
RHBDD3-202ENST00000406335 MSMPQ1L6U9 139 aa18.04■□□□□ 0.48
RHBDD3-202ENST00000406335 ZNF627Q7L945 461 aa18.04■□□□□ 0.48
RHBDD3-202ENST00000406335 RBM15BQ8NDT2 890 aaKnown RBP18.04■□□□□ 0.48
RHBDD3-202ENST00000406335 MOSPD2Q8NHP6 518 aa18.04■□□□□ 0.48
RHBDD3-202ENST00000406335 SLC25A44Q96H78 314 aaPredicted RBP18.04■□□□□ 0.48
RHBDD3-202ENST00000406335 HSH2DQ96JZ2 352 aa18.04■□□□□ 0.48
RHBDD3-202ENST00000406335 MAN2C1Q9NTJ4 1040 aa18.04■□□□□ 0.48
RHBDD3-202ENST00000406335 B3GNT2Q9NY97 397 aa18.04■□□□□ 0.48
RHBDD3-202ENST00000406335 ZNF224Q9NZL3 707 aa18.04■□□□□ 0.48
RHBDD3-202ENST00000406335 IGF2P01344 180 aa18.03■□□□□ 0.48
RHBDD3-202ENST00000406335 IFNW1P05000 195 aa18.03■□□□□ 0.48
RHBDD3-202ENST00000406335 PGA4P0DJD7 388 aa18.03■□□□□ 0.48
RHBDD3-202ENST00000406335 PGA3P0DJD8 388 aa18.03■□□□□ 0.48
RHBDD3-202ENST00000406335 RAD52P43351 418 aa18.03■□□□□ 0.48
RHBDD3-202ENST00000406335 IFI44LQ53G44 452 aa18.03■□□□□ 0.48
RHBDD3-202ENST00000406335 AWAT1Q58HT5 328 aa18.03■□□□□ 0.48
RHBDD3-202ENST00000406335 AVPI1Q5T686 147 aa18.03■□□□□ 0.48
RHBDD3-202ENST00000406335 TMEM154Q6P9G4 183 aa18.03■□□□□ 0.48
RHBDD3-202ENST00000406335 LRFN4Q6PJG9 635 aa18.03■□□□□ 0.48
RHBDD3-202ENST00000406335 LIPHQ8WWY8 451 aa18.03■□□□□ 0.48
RHBDD3-202ENST00000406335 GEMIN6Q8WXD5 167 aaKnown RBP18.03■□□□□ 0.48
RHBDD3-202ENST00000406335 ZNF566Q969W8 418 aa18.03■□□□□ 0.48
RHBDD3-202ENST00000406335 FAM162AQ96A26 154 aa18.03■□□□□ 0.48
RHBDD3-202ENST00000406335 RACGAP1Q9H0H5 632 aa18.03■□□□□ 0.48
RHBDD3-202ENST00000406335 ZNF665Q9H7R5 613 aa18.03■□□□□ 0.48
RHBDD3-202ENST00000406335 DDX28Q9NUL7 540 aaKnown RBP18.03■□□□□ 0.48
RHBDD3-202ENST00000406335 EGFL7Q9UHF1 273 aa18.03■□□□□ 0.48
RHBDD3-202ENST00000406335 A0A0G2JMP0 313 aa18.02■□□□□ 0.48
RHBDD3-202ENST00000406335 A0A0X1KG70 313 aa18.02■□□□□ 0.48
RHBDD3-202ENST00000406335 UBL3O95164 117 aa18.02■□□□□ 0.48
RHBDD3-202ENST00000406335 TSPAN19P0C672 248 aa18.02■□□□□ 0.48
RHBDD3-202ENST00000406335 ZNF14P17017 642 aaPredicted RBP18.02■□□□□ 0.48
RHBDD3-202ENST00000406335 LMO4P61968 165 aa18.02■□□□□ 0.48
RHBDD3-202ENST00000406335 MRPS11P82912 194 aaKnown RBP18.02■□□□□ 0.48
RHBDD3-202ENST00000406335 LAPTM4AQ15012 233 aa18.02■□□□□ 0.48
RHBDD3-202ENST00000406335 FKBP9P1Q75LS8 142 aa18.02■□□□□ 0.48
RHBDD3-202ENST00000406335 OFCC1Q8IZS5 231 aa18.02■□□□□ 0.48
RHBDD3-202ENST00000406335 RNF148Q8N7C7 305 aa18.02■□□□□ 0.48
RHBDD3-202ENST00000406335 OR4M2Q8NGB6 313 aa18.02■□□□□ 0.48
RHBDD3-202ENST00000406335 FGFBP3Q8TAT2 258 aa18.02■□□□□ 0.48
RHBDD3-202ENST00000406335 NANPQ8TBE9 248 aa18.02■□□□□ 0.48
RHBDD3-202ENST00000406335 SNX33Q8WV41 574 aa18.02■□□□□ 0.48
RHBDD3-202ENST00000406335 ASB10Q8WXI3 467 aa18.02■□□□□ 0.48
RHBDD3-202ENST00000406335 RAB39BQ96DA2 213 aa18.02■□□□□ 0.48
RHBDD3-202ENST00000406335 ZNF75AQ96N20 296 aa18.02■□□□□ 0.48
RHBDD3-202ENST00000406335 SLC6A7Q99884 636 aa18.02■□□□□ 0.48
RHBDD3-202ENST00000406335 FNDC11Q9BVV2 318 aa18.02■□□□□ 0.48
RHBDD3-202ENST00000406335 INIPQ9NRY2 104 aa18.02■□□□□ 0.48
RHBDD3-202ENST00000406335 TAAR3PQ9P1P4 343 aa18.02■□□□□ 0.48
RHBDD3-202ENST00000406335 MYEF2Q9P2K5 600 aaKnown RBP18.02■□□□□ 0.48
RHBDD3-202ENST00000406335 SLC7A8Q9UHI5 535 aa18.02■□□□□ 0.48
RHBDD3-202ENST00000406335 FBXL3Q9UKT7 428 aa18.02■□□□□ 0.48
RHBDD3-202ENST00000406335 PCDHGB1Q9Y5G3 927 aa18.02■□□□□ 0.48
RHBDD3-202ENST00000406335 A0A1W2PRG6 482 aa18.01■□□□□ 0.47
RHBDD3-202ENST00000406335 NDUFAB1O14561 156 aa18.01■□□□□ 0.47
RHBDD3-202ENST00000406335 PRSS23O95084 383 aa18.01■□□□□ 0.47
RHBDD3-202ENST00000406335 PATE4P0C8F1 98 aa18.01■□□□□ 0.47
RHBDD3-202ENST00000406335 IFI30P13284 250 aa18.01■□□□□ 0.47
RHBDD3-202ENST00000406335 MAKP20794 623 aa18.01■□□□□ 0.47
RHBDD3-202ENST00000406335 FPR2P25090 351 aa18.01■□□□□ 0.47
RHBDD3-202ENST00000406335 MAGEB1P43366 347 aa18.01■□□□□ 0.47
RHBDD3-202ENST00000406335 RAB39AQ14964 217 aa18.01■□□□□ 0.47
RHBDD3-202ENST00000406335 DCAF12L2Q5VW00 463 aa18.01■□□□□ 0.47
RHBDD3-202ENST00000406335 RGS7BPQ6MZT1 257 aaPredicted RBP18.01■□□□□ 0.47
RHBDD3-202ENST00000406335 RBMS3Q6XE24 437 aaKnown RBP18.01■□□□□ 0.47
RHBDD3-202ENST00000406335 TSEN54Q7Z6J9 526 aaKnown RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms