RNA–Protein interactions for RNA: ENST00000405807.8

COL4A3BP-204, Transcript of collagen type IV alpha 3 binding protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A3BP, Length 2,843 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-204ENST00000405807 FMO6PO60774 539 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 INHAP05111 366 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 CDKN1BP46527 198 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 SIM1P81133 766 aaPredicted RBP14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 COL9A2Q14055 689 aaPredicted RBP14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 HNF4GQ14541 408 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 AMZ1Q400G9 498 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 UNQ9370/PRO34162Q6UXP9 181 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 BEND2Q8NDZ0 799 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 OTUB2Q96DC9 234 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 WDR89Q96FK6 387 aaPredicted RBP14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 SDF2Q99470 211 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 UTP23Q9BRU9 249 aaKnown RBP14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 TTTY10Q9BZA0 68 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 CERS4Q9HA82 394 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 TREM1Q9NP99 234 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 TAS2R10Q9NYW0 307 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 SCN5AQ14524 2016 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 FXYD6-FXYD2A0A087WZ82 144 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 A0A1W2PPQ1 181 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 IFITM5A6NNB3 132 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 HMSDA8MTL9 139 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 PQBP1O60828 265 aaKnown RBP14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 LYPD3O95274 346 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 PPP1R3DO95685 299 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 HIST1H2ABP04908 130 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 DBIP07108 87 aaKnown RBP14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 CISD3P0C7P0 127 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 UBCP0CG48 685 aaKnown RBP14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 ZNF77Q15935 545 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 TMEM71Q6P5X7 295 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 HIST3H2AQ7L7L0 130 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 SLC35F3Q8IY50 421 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 OR1S2Q8NGQ3 325 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 HIST1H2ACQ93077 130 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 TCTN2Q96GX1 697 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 FXYD6Q9H0Q3 95 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 CHRNA9Q9UGM1 479 aa14.74□□□□□ -0.05
COL4A3BP-204ENST00000405807 LRRK1Q38SD2 2015 aa14.73□□□□□ -0.05
COL4A3BP-204ENST00000405807 CENPVL1A0A0U1RR11 272 aa14.73□□□□□ -0.05
COL4A3BP-204ENST00000405807 EDNRAP25101 427 aa14.73□□□□□ -0.05
COL4A3BP-204ENST00000405807 ADH6P28332 368 aa14.73□□□□□ -0.05
COL4A3BP-204ENST00000405807 LINC00303Q3SY05 128 aa14.73□□□□□ -0.05
COL4A3BP-204ENST00000405807 FCRLAQ7L513 359 aa14.73□□□□□ -0.05
COL4A3BP-204ENST00000405807 THNSL2Q86YJ6 484 aa14.73□□□□□ -0.05
COL4A3BP-204ENST00000405807 LRRC25Q8N386 305 aaPredicted RBP14.73□□□□□ -0.05
COL4A3BP-204ENST00000405807 RFLNBQ8N5W9 214 aa14.73□□□□□ -0.05
COL4A3BP-204ENST00000405807 DNAAF1Q8NEP3 725 aa14.73□□□□□ -0.05
COL4A3BP-204ENST00000405807 INSM2Q96T92 566 aaPredicted RBP14.73□□□□□ -0.05
COL4A3BP-204ENST00000405807 SNHG12Q9BXW3 62 aa14.73□□□□□ -0.05
COL4A3BP-204ENST00000405807 NOX4Q9NPH5 578 aa14.73□□□□□ -0.05
COL4A3BP-204ENST00000405807 BLOC1S5-TXNDC5H3BN57 136 aa14.73□□□□□ -0.05
COL4A3BP-204ENST00000405807 J3QW42 95 aa14.73□□□□□ -0.05
COL4A3BP-204ENST00000405807 MAGEB4O15481 346 aaPredicted RBP14.73□□□□□ -0.05
COL4A3BP-204ENST00000405807 DPP4P27487 766 aa14.73□□□□□ -0.05
COL4A3BP-204ENST00000405807 MECP2P51608 486 aaKnown RBP14.73□□□□□ -0.05
COL4A3BP-204ENST00000405807 CDK3Q00526 305 aa14.73□□□□□ -0.05
COL4A3BP-204ENST00000405807 DUSP5Q16690 384 aa14.73□□□□□ -0.05
COL4A3BP-204ENST00000405807 C14orf28Q4W4Y0 310 aa14.73□□□□□ -0.05
COL4A3BP-204ENST00000405807 MRPL2Q5T653 305 aaKnown RBP14.73□□□□□ -0.05
COL4A3BP-204ENST00000405807 MTSS1LQ765P7 747 aa14.73□□□□□ -0.05
COL4A3BP-204ENST00000405807 C1orf216Q8TAB5 229 aa14.73□□□□□ -0.05
COL4A3BP-204ENST00000405807 NPRL2Q8WTW4 380 aa14.73□□□□□ -0.05
COL4A3BP-204ENST00000405807 SLC25A38Q96DW6 304 aa14.73□□□□□ -0.05
COL4A3BP-204ENST00000405807 TRIM2Q9C040 744 aa14.73□□□□□ -0.05
COL4A3BP-204ENST00000405807 MCIDASD6RGH6 385 aa14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 GPRIN2O60269 458 aa14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 NDUFB6O95139 128 aa14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 RAB40ALP0C0E4 278 aa14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 AVPR2P30518 371 aa14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 DLX5P56178 289 aa14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 TGIF1Q15583 401 aa14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 DNLZQ5SXM8 178 aa14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 LANCL3Q6ZV70 420 aa14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 LRRTM1Q86UE6 522 aa14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 LSRQ86X29 649 aaPredicted RBP14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 OR1N1Q8NGS0 311 aa14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 C15orf40Q8WUR7 153 aa14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 RAB40AQ8WXH6 277 aa14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 ZMYND19Q96E35 227 aaPredicted RBP14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 CNN2Q99439 309 aaKnown RBP14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 MRI1Q9BV20 369 aa14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 LGR4Q9BXB1 951 aa14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 RAB11FIP5Q9BXF6 653 aa14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 APOBEC3BQ9UH17 382 aaKnown RBP14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 GNG8Q9UK08 70 aa14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 RNF24Q9Y225 148 aa14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 OR6C76A6NM76 312 aa14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 AK1P00568 194 aa14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 PCCBP05166 539 aa14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 NID1P14543 1247 aa14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 S100A7P31151 101 aa14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 SLC6A6P31641 620 aa14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 PTH2RP49190 550 aa14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 BTN3A2P78410 334 aa14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 MLF2Q15773 248 aaPredicted RBP14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 TMEM69Q5SWH9 247 aa14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 TMEM200AQ86VY9 491 aa14.72□□□□□ -0.05
COL4A3BP-204ENST00000405807 ARL14Q8N4G2 192 aa14.72□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms