RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 IDH3GP51553 393 aaPredicted RBP16.62■□□□□ 0.25
COL18A1-204ENST00000400337 RPS27AP62979 156 aaKnown RBP16.62■□□□□ 0.25
COL18A1-204ENST00000400337 UBA52P62987 128 aaKnown RBP16.62■□□□□ 0.25
COL18A1-204ENST00000400337 LILRA6Q6PI73 481 aa16.62■□□□□ 0.25
COL18A1-204ENST00000400337 BBS1Q8NFJ9 593 aa16.62■□□□□ 0.25
COL18A1-204ENST00000400337 APH1AQ96BI3 265 aa16.62■□□□□ 0.25
COL18A1-204ENST00000400337 SIAEQ9HAT2 523 aa16.62■□□□□ 0.25
COL18A1-204ENST00000400337 PRMT8Q9NR22 394 aaPredicted RBP16.62■□□□□ 0.25
COL18A1-204ENST00000400337 OR2W5A6NFC9 320 aa16.62■□□□□ 0.25
COL18A1-204ENST00000400337 NXPH2O95156 264 aa16.62■□□□□ 0.25
COL18A1-204ENST00000400337 GLULP15104 373 aa16.62■□□□□ 0.25
COL18A1-204ENST00000400337 RPL35P42766 123 aaKnown RBP16.62■□□□□ 0.25
COL18A1-204ENST00000400337 ARAP2Q8WZ64 1704 aa16.62■□□□□ 0.25
COL18A1-204ENST00000400337 DSCR3O14972 297 aa16.62■□□□□ 0.25
COL18A1-204ENST00000400337 SGCEO43556 437 aa16.62■□□□□ 0.25
COL18A1-204ENST00000400337 TPOP07202 933 aa16.62■□□□□ 0.25
COL18A1-204ENST00000400337 GLB1P16278 677 aa16.62■□□□□ 0.25
COL18A1-204ENST00000400337 OMGP23515 440 aa16.62■□□□□ 0.25
COL18A1-204ENST00000400337 RPL18Q07020 188 aaKnown RBP16.62■□□□□ 0.25
COL18A1-204ENST00000400337 SFRP5Q5T4F7 317 aa16.62■□□□□ 0.25
COL18A1-204ENST00000400337 MORN4Q8NDC4 146 aa16.62■□□□□ 0.25
COL18A1-204ENST00000400337 BHLHE23Q8NDY6 225 aa16.62■□□□□ 0.25
COL18A1-204ENST00000400337 NGBQ9NPG2 151 aa16.62■□□□□ 0.25
COL18A1-204ENST00000400337 HRH3Q9Y5N1 445 aa16.62■□□□□ 0.25
COL18A1-204ENST00000400337 OR6C76A6NM76 312 aa16.62■□□□□ 0.25
COL18A1-204ENST00000400337 ACSM1Q08AH1 577 aa16.62■□□□□ 0.25
COL18A1-204ENST00000400337 CORO6Q6QEF8 472 aa16.62■□□□□ 0.25
COL18A1-204ENST00000400337 CPEB2Q7Z5Q1 589 aaKnown RBP16.62■□□□□ 0.25
COL18A1-204ENST00000400337 MYOTQ9UBF9 498 aa16.62■□□□□ 0.25
COL18A1-204ENST00000400337 MAGEB4O15481 346 aaPredicted RBP16.61■□□□□ 0.25
COL18A1-204ENST00000400337 ZNF728P0DKX0 622 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 CATR1Q13166 79 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 ZNF674Q2M3X9 581 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 ARIH2OSQ8N7S6 290 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 OR11L1Q8NGX0 322 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 MVB12AQ96EY5 273 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 SLCO5A1Q9H2Y9 848 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 BIN3Q9NQY0 253 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 PTTG3PQ9NZH4 202 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 A0A0B4J2A0 478 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 SPTY2D1-AS1A0A0U1RR47 76 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 ETV6P41212 452 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 FAM53BQ14153 422 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 SHPKQ9UHJ6 478 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 SIPA1L3O60292 1781 aaPredicted RBP16.61■□□□□ 0.25
COL18A1-204ENST00000400337 A0A0D9SG52 128 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 A0A1W2PPV4 95 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 RNF212BA8MTL3 300 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 SULT1C2O00338 296 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 FADS1O60427 444 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 QDPRP09417 244 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 GABRG2P18507 467 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 DIO1P49895 249 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 EMDP50402 254 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 RFPL4BQ6ZWI9 263 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 OVCH1Q7RTY7 1134 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 TAAR8Q969N4 342 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 TSSK2Q96PF2 358 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 NKX3-1Q99801 234 aaPredicted RBP16.61■□□□□ 0.25
COL18A1-204ENST00000400337 C20orf85Q9H1P6 137 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 ASH2LQ9UBL3 628 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 CXorf51AA0A1B0GTR3 108 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 LOC107986453A0A1B0GWG9 222 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 FITM1A5D6W6 292 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 MED6O75586 246 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 MYF5P13349 255 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 FKBP2P26885 142 aaKnown RBP16.61■□□□□ 0.25
COL18A1-204ENST00000400337 EPHA2P29317 976 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 CCR9P51686 369 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 CAMK2BQ13554 666 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 OPCMLQ14982 345 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 KLHDC8BQ8IXV7 354 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 BANF2Q9H503 90 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 TAS2R4Q9NYW5 299 aa16.61■□□□□ 0.25
COL18A1-204ENST00000400337 CPEP16870 476 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 ACHEP22303 614 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 TMEM81Q6P7N7 255 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 NAXDQ8IW45 347 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 SPEM1Q8N4L4 309 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 MALSU1Q96EH3 234 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 NDUFB11Q9NX14 153 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 WSB2Q9NYS7 404 aaPredicted RBP16.6■□□□□ 0.25
COL18A1-204ENST00000400337 POMT2Q9UKY4 750 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 A0A0A6YYD5 115 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 MSTNO14793 375 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 SOD1P00441 154 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 PTGER4P35408 488 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 RPS27P42677 84 aaKnown RBP16.6■□□□□ 0.25
COL18A1-204ENST00000400337 FKRPQ9H9S5 495 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 NPAP1Q9NZP6 1156 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 LUZP4Q9P127 313 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 SERGEFQ9UGK8 458 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 KIF25Q9UIL4 384 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 TTC3P53804 2025 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 SULT1B1O43704 296 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 CHATP28329 748 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 FAHD1Q6P587 224 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 CD300LGQ6UXG3 332 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 ETFBKMTQ8IXQ9 262 aa16.6■□□□□ 0.25
COL18A1-204ENST00000400337 DMBX1Q8NFW5 382 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms