RNA–Protein interactions for RNA: ENST00000398868.7

ATL3-201, Transcript of atlastin GTPase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ATL3, Length 7,135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-201ENST00000398868 BPIFCQ8NFQ6 507 aa8.6□□□□□ -1.03
ATL3-201ENST00000398868 BCL7CQ8WUZ0 217 aaPredicted RBP8.6□□□□□ -1.03
ATL3-201ENST00000398868 OR5M11Q96RB7 305 aa8.6□□□□□ -1.03
ATL3-201ENST00000398868 P2RY12Q9H244 342 aa8.6□□□□□ -1.03
ATL3-201ENST00000398868 IGKV6D-21A0A0A0MT36 114 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 IGKV6-21A0A0C4DH24 114 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 ZCWPW2A0A1B0GU75 182 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 ZNF140P52738 457 aaPredicted RBP8.59□□□□□ -1.03
ATL3-201ENST00000398868 HSF1Q00613 529 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 CMPK2Q5EBM0 449 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 FBXW5Q969U6 566 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 FBXO17Q96EF6 278 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 PRRC1Q96M27 445 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 NUDT9Q9BW91 350 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 SRRQ9GZT4 340 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 EMC7Q9NPA0 242 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 LOC102725191A0A1B0GVB3 256 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.59□□□□□ -1.03
ATL3-201ENST00000398868 CRYM-AS1A6NIL9 109 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 ZNF587BE7ETH6 402 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 CSO75390 466 aaKnown RBP8.59□□□□□ -1.03
ATL3-201ENST00000398868 KCNK2O95069 426 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 TCRBP04435 133 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 GPX3P22352 226 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 GIPRP48546 466 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 PRLHRP49683 370 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 DAPP51397 102 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 RPP30P78346 268 aaKnown RBP8.59□□□□□ -1.03
ATL3-201ENST00000398868 RAB35Q15286 201 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 ASTLQ6HA08 431 aaPredicted RBP8.59□□□□□ -1.03
ATL3-201ENST00000398868 OPN5Q6U736 354 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 ZNF322Q6U7Q0 402 aaPredicted RBP8.59□□□□□ -1.03
ATL3-201ENST00000398868 SFTPA1Q8IWL2 248 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 OR6V1Q8N148 313 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 TSLPQ969D9 159 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 FIZ1Q96SL8 496 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 BANF2Q9H503 90 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 OBP2AQ9NY56 170 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 CLEC2DQ9UHP7 191 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 PPT2Q9UMR5 302 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 OR51B4Q9Y5P0 310 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 DFFBO76075 338 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 LY86O95711 162 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 TFAP2AP05549 437 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 RPS16P62249 146 aaKnown RBP8.59□□□□□ -1.03
ATL3-201ENST00000398868 RBMS2Q15434 407 aaKnown RBP8.59□□□□□ -1.03
ATL3-201ENST00000398868 YOD1Q5VVQ6 348 aaPredicted RBP8.59□□□□□ -1.03
ATL3-201ENST00000398868 RANBP10Q6VN20 620 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 ZC3H3Q8IXZ2 948 aaKnown RBP8.59□□□□□ -1.03
ATL3-201ENST00000398868 ZFP62Q8NB50 900 aaPredicted RBP8.59□□□□□ -1.03
ATL3-201ENST00000398868 PPP1R35Q8TAP8 253 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 ASB16Q96NS5 453 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 SGPP1Q9BX95 441 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 OR52D1Q9H346 318 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 NT5DC2Q9H857 520 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 FGF22Q9HCT0 170 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 SLC2A8Q9NY64 477 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 PPP1R3CQ9UQK1 317 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 LRP6O75581 1613 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 C5orf49A4QMS7 147 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 ONECUT2O95948 504 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 ADRB1P08588 477 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 AOAHP28039 575 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 MMP12P39900 470 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 RPS27P42677 84 aaKnown RBP8.59□□□□□ -1.03
ATL3-201ENST00000398868 MRPS10P82664 201 aaKnown RBP8.59□□□□□ -1.03
ATL3-201ENST00000398868 TLE4Q04727 773 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 ZNF684Q5T5D7 378 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 FAM109BQ6ICB4 259 aaPredicted RBP8.59□□□□□ -1.03
ATL3-201ENST00000398868 LILRA2Q8N149 483 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 OR11L1Q8NGX0 322 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.59□□□□□ -1.03
ATL3-201ENST00000398868 RAB39BQ96DA2 213 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 MSI2Q96DH6 328 aaKnown RBP8.59□□□□□ -1.03
ATL3-201ENST00000398868 PIGQQ9BRB3 760 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 C1GALT1Q9NS00 363 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 CLEC5AQ9NY25 188 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 SPHK1Q9NYA1 384 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 ZNF724A8MTY0 619 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 SELENOFO60613 162 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 NPY4RP50391 375 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 PCBP3P57721 371 aaKnown RBP8.59□□□□□ -1.03
ATL3-201ENST00000398868 MEF2DQ14814 521 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 ZNF239Q16600 458 aaKnown RBP8.59□□□□□ -1.03
ATL3-201ENST00000398868 PAQR9Q6ZVX9 377 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 ZNRF4Q8WWF5 429 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 LPAR2Q9HBW0 351 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 ONECUT1Q9UBC0 465 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 PHF1O43189 567 aaPredicted RBP8.59□□□□□ -1.03
ATL3-201ENST00000398868 WBP2NLQ6ICG8 309 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 SERPINA11Q86U17 422 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 EMG1Q92979 244 aaKnown RBP8.59□□□□□ -1.03
ATL3-201ENST00000398868 KCNJ15Q99712 375 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 PTDSS2Q9BVG9 487 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 ENTPD2Q9Y5L3 495 aa8.59□□□□□ -1.03
ATL3-201ENST00000398868 TMED7-TICAM2A0A0A6YYA0 188 aa8.58□□□□□ -1.04
ATL3-201ENST00000398868 OR2J2O76002 312 aa8.58□□□□□ -1.04
ATL3-201ENST00000398868 CNR1P21554 472 aa8.58□□□□□ -1.04
ATL3-201ENST00000398868 IMPA1P29218 277 aa8.58□□□□□ -1.04
ATL3-201ENST00000398868 CCR2P41597 374 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms